Wall clock time and date at job start Sat Mar 6 2021 23:27:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33819 * 122.44659 * 2 1 4 4 C 1.50700 * 124.52468 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.46867 * 112.32013 * 4 3 2 6 6 Si 1.86294 * 109.46919 * 232.32008 * 4 3 2 7 7 S 1.70617 * 110.95119 * 179.73599 * 3 2 1 8 8 C 1.75835 * 91.56612 * 0.26574 * 7 3 2 9 9 C 1.46575 * 125.45877 * 180.02562 * 8 7 3 10 10 O 1.21707 * 119.99874 * 179.97438 * 9 8 7 11 11 N 1.34775 * 120.00124 * 359.97438 * 9 8 7 12 12 C 1.46507 * 120.00027 * 180.02562 * 11 9 8 13 13 C 1.52994 * 109.47108 * 182.18177 * 12 11 9 14 14 C 1.50701 * 112.85188 * 69.16894 * 13 12 11 15 15 C 1.38237 * 120.00457 * 245.63022 * 14 13 12 16 16 C 1.38234 * 119.99912 * 179.81007 * 15 14 13 17 17 C 1.38237 * 120.00096 * 0.41838 * 16 15 14 18 18 C 1.38237 * 120.00006 * 359.81189 * 17 16 15 19 19 C 1.38237 * 120.00019 * 0.02562 * 18 17 16 20 20 C 1.53789 * 113.61409 * 297.97692 * 13 12 11 21 21 C 1.53784 * 87.07930 * 270.88293 * 20 13 12 22 22 H 1.08992 * 113.61561 * 220.01960 * 21 20 13 23 23 O 1.42899 * 113.61244 * 89.11685 * 21 20 13 24 24 C 1.53780 * 113.61481 * 200.47788 * 13 12 11 25 25 C 1.36652 * 109.07830 * 0.02562 * 8 7 3 26 26 H 1.09001 * 109.46832 * 84.50919 * 1 2 3 27 27 H 1.08998 * 109.47092 * 204.50420 * 1 2 3 28 28 H 1.08991 * 109.47368 * 324.51070 * 1 2 3 29 29 H 1.09001 * 109.47156 * 352.31805 * 4 3 2 30 30 H 0.96696 * 114.00057 * 60.00165 * 5 4 3 31 31 H 1.48500 * 110.00190 * 58.68025 * 6 4 3 32 32 H 1.48507 * 109.99841 * 179.97438 * 6 4 3 33 33 H 0.96995 * 120.00008 * 359.97438 * 11 9 8 34 34 H 1.08996 * 109.46886 * 302.18187 * 12 11 9 35 35 H 1.09002 * 109.46740 * 62.18199 * 12 11 9 36 36 H 1.07997 * 119.99798 * 359.97438 * 15 14 13 37 37 H 1.08000 * 119.99713 * 180.21031 * 16 15 14 38 38 H 1.07999 * 119.99705 * 179.79478 * 17 16 15 39 39 H 1.07998 * 119.99856 * 179.97438 * 18 17 16 40 40 H 1.07995 * 120.00111 * 179.97438 * 19 18 17 41 41 H 1.08994 * 113.61265 * 25.43159 * 20 13 12 42 42 H 1.09000 * 113.61519 * 156.25215 * 20 13 12 43 43 H 0.96705 * 113.99964 * 180.02562 * 23 21 20 44 44 H 1.09000 * 113.61488 * 203.66639 * 24 13 12 45 45 H 1.08994 * 113.61143 * 334.56839 * 24 13 12 46 46 H 1.08003 * 123.34403 * 180.02562 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6354 2.5162 0.0006 5 8 1.9205 3.1544 1.2469 6 14 2.3801 3.5080 -1.3896 7 16 3.8969 0.7893 0.0073 8 6 3.5937 -0.9427 0.0023 9 6 4.6231 -1.9862 0.0056 10 8 4.3002 -3.1596 0.0021 11 7 5.9273 -1.6462 0.0126 12 6 6.9562 -2.6892 0.0154 13 6 8.3402 -2.0400 0.0783 14 6 8.6182 -1.3822 1.4054 15 6 8.7714 -0.0103 1.4782 16 6 9.0226 0.5934 2.6961 17 6 9.1291 -0.1756 3.8399 18 6 8.9807 -1.5481 3.7663 19 6 8.7262 -2.1515 2.5489 20 6 8.6562 -1.1445 -1.1313 21 6 9.2183 -2.4017 -1.8156 22 1 10.1296 -2.2186 -2.3847 23 8 8.2403 -3.1376 -2.5532 24 6 9.4742 -2.9591 -0.4054 25 6 2.2446 -1.1600 -0.0052 26 1 -0.3633 0.0983 -1.0230 27 1 -0.3633 -0.9351 0.4262 28 1 -0.3633 0.8367 0.5966 29 1 0.5560 2.4522 -0.1364 30 1 2.8645 3.2456 1.4353 31 1 2.1180 2.8379 -2.6887 32 1 1.8064 4.8777 -1.4003 33 1 6.1847 -0.7110 0.0151 34 1 6.8175 -3.3340 0.8831 35 1 6.8743 -3.2827 -0.8952 36 1 8.6922 0.5901 0.5840 37 1 9.1389 1.6656 2.7536 38 1 9.3286 0.2958 4.7909 39 1 9.0643 -2.1489 4.6598 40 1 8.6106 -3.2237 2.4913 41 1 7.7690 -0.7413 -1.6196 42 1 9.4093 -0.3836 -0.9264 43 1 8.5878 -3.9298 -2.9856 44 1 10.4520 -2.6953 -0.0024 45 1 9.2475 -4.0208 -0.3077 46 1 1.8020 -2.1452 -0.0091 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:27:00 Heat of formation + Delta-G solvation = -29.726794 kcal Electronic energy + Delta-G solvation = -30026.389342 eV Core-core repulsion = 25974.935734 eV Total energy + Delta-G solvation = -4051.453608 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.95804 -40.51624 -39.57206 -39.32067 -37.58774 -36.41995 -34.95479 -32.51536 -31.95112 -31.77164 -29.88183 -29.00934 -27.15558 -26.32932 -24.82679 -23.94873 -23.25221 -22.42225 -21.63394 -20.37946 -19.93460 -19.22324 -18.71677 -17.80742 -17.75643 -17.49716 -16.78894 -16.57668 -16.14571 -16.04638 -15.86658 -15.75234 -15.55633 -15.32061 -14.96831 -14.83164 -14.50010 -14.32290 -14.20850 -14.15440 -14.05690 -13.65895 -13.45674 -13.30355 -13.16147 -13.11991 -12.96828 -12.79280 -12.41442 -12.30640 -12.19919 -11.96219 -11.93042 -11.69019 -11.37017 -11.00616 -10.81328 -10.78147 -10.02822 -9.85720 -9.65272 -9.64269 -9.44197 -5.23873 -0.59298 0.33339 0.39321 0.45970 0.73477 1.06952 1.30869 1.56878 1.85268 2.09492 2.27799 2.78698 2.97514 3.25897 3.26860 3.42877 3.52938 3.58994 3.68655 3.73302 3.94068 4.05326 4.08138 4.11689 4.15991 4.19522 4.29991 4.40088 4.46815 4.52163 4.56836 4.61385 4.63512 4.64646 4.69572 4.81992 4.84201 4.94171 4.96314 4.99016 5.07644 5.09863 5.15318 5.26837 5.38353 5.40009 5.54605 5.60386 5.63280 6.05033 6.34310 6.46148 6.59152 7.20559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.096 4.096 3 C -0.234 4.234 4 C -0.033 4.033 5 O -0.533 6.533 6 Si 0.675 3.325 7 S 0.200 5.800 8 C -0.254 4.254 9 C 0.592 3.408 10 O -0.526 6.526 11 N -0.718 5.718 12 C 0.146 3.854 13 C -0.053 4.053 14 C -0.070 4.070 15 C -0.121 4.121 16 C -0.115 4.115 17 C -0.122 4.122 18 C -0.116 4.116 19 C -0.111 4.111 20 C -0.129 4.129 21 C 0.080 3.920 22 H 0.073 0.927 23 O -0.547 6.547 24 C -0.150 4.150 25 C -0.048 4.048 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.128 0.872 30 H 0.377 0.623 31 H -0.247 1.247 32 H -0.240 1.240 33 H 0.397 0.603 34 H 0.071 0.929 35 H 0.097 0.903 36 H 0.124 0.876 37 H 0.123 0.877 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.120 0.880 41 H 0.082 0.918 42 H 0.103 0.897 43 H 0.383 0.617 44 H 0.097 0.903 45 H 0.080 0.920 46 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.491 2.722 -0.648 6.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.109 4.109 3 C -0.353 4.353 4 C -0.146 4.146 5 O -0.338 6.338 6 Si 0.574 3.426 7 S 0.468 5.532 8 C -0.375 4.375 9 C 0.378 3.622 10 O -0.404 6.404 11 N -0.369 5.369 12 C 0.023 3.977 13 C -0.053 4.053 14 C -0.070 4.070 15 C -0.139 4.139 16 C -0.133 4.133 17 C -0.140 4.140 18 C -0.134 4.134 19 C -0.129 4.129 20 C -0.166 4.166 21 C 0.021 3.979 22 H 0.091 0.909 23 O -0.353 6.353 24 C -0.188 4.188 25 C -0.081 4.081 26 H 0.091 0.909 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.145 0.855 30 H 0.225 0.775 31 H -0.171 1.171 32 H -0.163 1.163 33 H 0.231 0.769 34 H 0.089 0.911 35 H 0.115 0.885 36 H 0.141 0.859 37 H 0.141 0.859 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.138 0.862 41 H 0.100 0.900 42 H 0.122 0.878 43 H 0.231 0.769 44 H 0.115 0.885 45 H 0.099 0.901 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 5.424 3.715 -1.147 6.673 hybrid contribution -1.209 -1.270 0.213 1.767 sum 4.215 2.444 -0.934 4.961 Atomic orbital electron populations 1.20617 0.89191 1.03580 1.02649 1.18690 0.98093 0.90933 1.03173 1.24432 0.98854 1.00731 1.11320 1.24635 1.03949 0.90037 0.95945 1.86569 1.29979 1.79871 1.37355 0.95137 0.90047 0.80215 0.77212 1.82610 1.02872 0.98895 1.68782 1.24525 0.98014 0.96630 1.18293 1.16856 0.81501 0.87362 0.76491 1.90858 1.81579 1.18103 1.49818 1.45687 1.05246 1.10313 1.75684 1.21268 0.83145 0.89485 1.03825 1.20932 0.95200 0.97466 0.91703 1.19578 0.99884 0.93569 0.93930 1.21066 1.00849 0.93970 0.97990 1.21170 0.99586 0.99992 0.92597 1.21212 1.00073 0.94069 0.98651 1.21186 0.99432 0.95046 0.97699 1.20976 0.99883 0.99881 0.92168 1.23258 1.02532 0.96104 0.94704 1.22632 0.91382 0.93016 0.90876 0.90916 1.86492 1.37148 1.42532 1.69100 1.23676 0.98222 1.00033 0.96908 1.20695 0.90944 1.00030 0.96403 0.90867 0.90769 0.90947 0.85536 0.77540 1.17121 1.16341 0.76901 0.91105 0.88519 0.85856 0.85883 0.86061 0.86026 0.86210 0.89985 0.87843 0.76862 0.88494 0.90105 0.82616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 9.46 36.01 0.34 0.35 16 2 C -0.10 -0.14 5.78 -106.45 -0.62 -0.75 16 3 C -0.23 -0.12 4.84 -35.86 -0.17 -0.29 16 4 C -0.03 0.01 2.76 36.01 0.10 0.11 16 5 O -0.53 -0.05 12.88 -35.23 -0.45 -0.51 16 6 Si 0.68 -0.71 32.10 -169.99 -5.46 -6.17 16 7 S 0.20 -0.15 20.80 -107.50 -2.24 -2.38 16 8 C -0.25 -0.62 6.45 -36.79 -0.24 -0.86 16 9 C 0.59 2.38 7.78 -12.90 -0.10 2.28 16 10 O -0.53 -4.00 16.84 5.18 0.09 -3.91 16 11 N -0.72 -0.94 5.15 -61.65 -0.32 -1.26 16 12 C 0.15 0.15 4.84 -4.04 -0.02 0.13 16 13 C -0.05 0.07 0.63 -154.85 -0.10 -0.03 16 14 C -0.07 0.04 4.78 -104.62 -0.50 -0.46 16 15 C -0.12 0.15 9.05 -39.58 -0.36 -0.21 16 16 C -0.12 0.10 10.05 -39.58 -0.40 -0.30 16 17 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 18 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 19 C -0.11 -0.02 9.28 -39.58 -0.37 -0.39 16 20 C -0.13 0.27 5.90 -25.91 -0.15 0.12 16 21 C 0.08 -0.17 5.28 -25.91 -0.14 -0.31 16 22 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 23 O -0.55 0.48 11.54 -35.23 -0.41 0.07 16 24 C -0.15 0.33 6.94 -25.92 -0.18 0.15 16 25 C -0.05 -0.12 9.78 -40.44 -0.40 -0.51 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.07 -0.05 8.10 -51.93 -0.42 -0.47 16 28 H 0.07 -0.02 7.03 -51.93 -0.37 -0.39 16 29 H 0.13 -0.03 6.28 -51.93 -0.33 -0.36 16 30 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 31 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 32 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 33 H 0.40 -0.24 7.08 -40.82 -0.29 -0.53 16 34 H 0.07 0.15 7.88 -51.93 -0.41 -0.26 16 35 H 0.10 0.22 5.99 -51.93 -0.31 -0.09 16 36 H 0.12 -0.38 6.40 -52.49 -0.34 -0.72 16 37 H 0.12 -0.32 8.06 -52.49 -0.42 -0.74 16 38 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 39 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 40 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 41 H 0.08 -0.11 7.56 -51.93 -0.39 -0.51 16 42 H 0.10 -0.35 6.78 -51.93 -0.35 -0.70 16 43 H 0.38 -1.71 9.12 45.56 0.42 -1.29 16 44 H 0.10 -0.24 8.10 -51.93 -0.42 -0.66 16 45 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 46 H 0.16 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 390.89 15.07 5.89 5.89 Total: 0.00 -8.74 390.89 -12.37 -21.11 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -5.39 Total: -11.08 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -4.09 Total: -1.76 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: -0.32 Total: -1.26 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.77 Total: -4.35 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.46 Total: -6.17 kcal Atomic # 16 Polarization: -0.15 SS G_CDS: -2.24 Total: -2.38 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.74 -12.37 -21.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.618 kcal (2) G-P(sol) polarization free energy of solvation -8.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds