Wall clock time and date at job start Sat Mar 6 2021 23:27:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36768 * 125.80653 * 2 1 4 4 C 1.47264 * 126.93858 * 0.02562 * 3 2 1 5 5 O 1.21627 * 119.99852 * 0.02562 * 4 3 2 6 6 N 1.34780 * 119.99767 * 179.97438 * 4 3 2 7 7 C 1.46493 * 119.99682 * 180.27496 * 6 4 3 8 8 C 1.53001 * 109.46876 * 174.55120 * 7 6 4 9 9 C 1.50693 * 112.85334 * 73.10167 * 8 7 6 10 10 C 1.38239 * 120.00004 * 245.77531 * 9 8 7 11 11 C 1.38238 * 120.00018 * 179.78458 * 10 9 8 12 12 C 1.38232 * 119.99792 * 0.44126 * 11 10 9 13 13 C 1.38234 * 120.00106 * 359.80848 * 12 11 10 14 14 C 1.38235 * 120.00390 * 359.97438 * 13 12 11 15 15 C 1.53784 * 113.61375 * 301.89752 * 8 7 6 16 16 C 1.53776 * 87.08616 * 270.88759 * 15 8 7 17 17 H 1.08997 * 113.61060 * 220.02124 * 16 15 8 18 18 O 1.42894 * 113.61640 * 89.20178 * 16 15 8 19 19 C 1.53788 * 87.08153 * 334.56669 * 16 15 8 20 20 C 1.46688 * 106.11866 * 180.28359 * 3 2 1 21 21 C 1.34492 * 106.32742 * 359.56892 * 20 3 2 22 22 C 1.50703 * 125.56748 * 180.14467 * 21 20 3 23 23 O 1.42899 * 109.46879 * 120.33786 * 22 21 20 24 24 Si 1.86298 * 109.47197 * 0.33862 * 22 21 20 25 25 N 1.34666 * 125.79992 * 180.02562 * 2 1 3 26 26 H 1.09001 * 109.46675 * 89.99976 * 1 2 3 27 27 H 1.08996 * 109.46902 * 209.99926 * 1 2 3 28 28 H 1.08999 * 109.46530 * 330.00354 * 1 2 3 29 29 H 0.97003 * 120.00036 * 0.02562 * 6 4 3 30 30 H 1.09001 * 109.47749 * 294.54952 * 7 6 4 31 31 H 1.09005 * 109.47306 * 54.55072 * 7 6 4 32 32 H 1.07996 * 119.99582 * 359.97438 * 10 9 8 33 33 H 1.07991 * 119.99702 * 180.27448 * 11 10 9 34 34 H 1.07999 * 120.00084 * 179.83631 * 12 11 10 35 35 H 1.08001 * 120.00276 * 180.02562 * 13 12 11 36 36 H 1.08001 * 120.00345 * 179.97438 * 14 13 12 37 37 H 1.09001 * 113.61182 * 25.43846 * 15 8 7 38 38 H 1.09006 * 113.61354 * 156.24954 * 15 8 7 39 39 H 0.96696 * 114.00547 * 180.02562 * 18 16 15 40 40 H 1.09000 * 113.61185 * 270.88458 * 19 16 15 41 41 H 1.08994 * 113.61314 * 139.98144 * 19 16 15 42 42 H 1.07993 * 126.83685 * 179.74155 * 20 3 2 43 43 H 1.08991 * 109.47199 * 240.33613 * 22 21 20 44 44 H 0.96704 * 114.00467 * 299.99613 * 23 22 21 45 45 H 1.48500 * 110.00016 * 179.97438 * 24 22 21 46 46 H 1.48497 * 110.00223 * 301.31914 * 24 22 21 47 47 H 0.97006 * 124.84794 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3072 1.1092 0.0000 4 6 1.8704 2.5155 0.0005 5 8 0.6841 2.7838 0.0015 6 7 2.7852 3.5053 0.0010 7 6 2.3507 4.9043 0.0076 8 6 3.5713 5.8168 0.1437 9 6 4.3949 5.8843 -1.1164 10 6 5.6803 5.3759 -1.1301 11 6 6.4343 5.4339 -2.2873 12 6 5.9061 6.0084 -3.4283 13 6 4.6225 6.5213 -3.4132 14 6 3.8669 6.4594 -2.2573 15 6 4.4026 5.5489 1.4094 16 6 3.4966 6.5651 2.1245 17 1 4.0323 7.2194 2.8122 18 8 2.3309 5.9808 2.7090 19 6 3.2463 7.1949 0.7440 20 6 3.6883 0.6150 -0.0070 21 6 3.6095 -0.7276 -0.0008 22 6 4.7819 -1.6745 -0.0015 23 8 4.7295 -2.4981 1.1651 24 14 6.3686 -0.6983 -0.0017 25 7 2.2948 -1.0922 -0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8900 0.5138 29 1 3.7313 3.2913 0.0006 30 1 1.8319 5.1281 -0.9245 31 1 1.6766 5.0714 0.8477 32 1 6.0944 4.9308 -0.2375 33 1 7.4369 5.0328 -2.2991 34 1 6.4960 6.0560 -4.3316 35 1 4.2097 6.9698 -4.3047 36 1 2.8643 6.8606 -2.2454 37 1 4.3035 4.5322 1.7898 38 1 5.4408 5.8703 1.3261 39 1 1.7569 6.6150 3.1598 40 1 3.9680 7.9676 0.4793 41 1 2.2138 7.5070 0.5872 42 1 4.5891 1.2107 -0.0128 43 1 4.7414 -2.3023 -0.8915 44 1 4.7614 -2.0051 1.9965 45 1 7.5325 -1.6207 -0.0017 46 1 6.4208 0.1860 -1.1935 47 1 1.9733 -2.0075 -0.0013 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_9865296.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:27:22 Heat of formation + Delta-G solvation = -19.167364 kcal Electronic energy + Delta-G solvation = -30562.307793 eV Core-core repulsion = 26484.960060 eV Total energy + Delta-G solvation = -4077.347733 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.40678 -41.78457 -39.66734 -39.24174 -37.78516 -36.30689 -34.75910 -32.83145 -32.16087 -31.86012 -31.70206 -29.18085 -28.33962 -26.99206 -25.52006 -24.63339 -23.26289 -22.83104 -22.30098 -21.43334 -20.58891 -19.68544 -19.07521 -18.62784 -17.72374 -17.15579 -17.02802 -16.66155 -16.45577 -16.43003 -15.82620 -15.73975 -15.55333 -15.29935 -15.25789 -14.94475 -14.70541 -14.50871 -14.29447 -14.13258 -14.01951 -13.93186 -13.74270 -13.34585 -13.33937 -13.17269 -13.03147 -12.90640 -12.70562 -12.23768 -12.12967 -12.03972 -11.87142 -11.61179 -11.26791 -10.74286 -10.72186 -10.55714 -9.90517 -9.81523 -9.65550 -9.58987 -9.07741 -5.09364 0.44824 0.50742 0.89536 1.12033 1.26059 1.60305 1.84718 2.19435 2.58864 2.79021 2.85451 3.05738 3.33672 3.36870 3.52703 3.57730 3.68868 3.78125 3.92149 3.94953 4.10962 4.13010 4.20674 4.23388 4.24396 4.34911 4.38188 4.55643 4.59367 4.63086 4.67755 4.74292 4.75254 4.77482 4.78630 4.94024 4.97384 5.03655 5.09860 5.13657 5.17393 5.24890 5.29518 5.59703 5.64441 5.66820 5.71978 5.77264 5.94548 6.10093 6.41630 6.44249 6.67333 6.85232 7.62414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C 0.118 3.882 3 C -0.232 4.232 4 C 0.594 3.406 5 O -0.549 6.549 6 N -0.719 5.719 7 C 0.148 3.852 8 C -0.052 4.052 9 C -0.067 4.067 10 C -0.120 4.120 11 C -0.117 4.117 12 C -0.124 4.124 13 C -0.116 4.116 14 C -0.111 4.111 15 C -0.128 4.128 16 C 0.081 3.919 17 H 0.071 0.929 18 O -0.545 6.545 19 C -0.151 4.151 20 C -0.159 4.159 21 C -0.015 4.015 22 C -0.050 4.050 23 O -0.544 6.544 24 Si 0.715 3.285 25 N -0.536 5.536 26 H 0.079 0.921 27 H 0.065 0.935 28 H 0.104 0.896 29 H 0.397 0.603 30 H 0.063 0.937 31 H 0.095 0.905 32 H 0.124 0.876 33 H 0.122 0.878 34 H 0.120 0.880 35 H 0.121 0.879 36 H 0.120 0.880 37 H 0.084 0.916 38 H 0.101 0.899 39 H 0.382 0.618 40 H 0.095 0.905 41 H 0.079 0.921 42 H 0.147 0.853 43 H 0.113 0.887 44 H 0.382 0.618 45 H -0.253 1.253 46 H -0.252 1.252 47 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.143 2.078 2.218 4.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.001 4.001 3 C -0.242 4.242 4 C 0.383 3.617 5 O -0.429 6.429 6 N -0.370 5.370 7 C 0.025 3.975 8 C -0.052 4.052 9 C -0.067 4.067 10 C -0.138 4.138 11 C -0.135 4.135 12 C -0.142 4.142 13 C -0.134 4.134 14 C -0.129 4.129 15 C -0.165 4.165 16 C 0.021 3.979 17 H 0.089 0.911 18 O -0.351 6.351 19 C -0.190 4.190 20 C -0.183 4.183 21 C -0.125 4.125 22 C -0.160 4.160 23 O -0.350 6.350 24 Si 0.614 3.386 25 N -0.131 5.131 26 H 0.098 0.902 27 H 0.084 0.916 28 H 0.123 0.877 29 H 0.231 0.769 30 H 0.081 0.919 31 H 0.113 0.887 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.138 0.862 35 H 0.139 0.861 36 H 0.138 0.862 37 H 0.103 0.897 38 H 0.119 0.881 39 H 0.230 0.770 40 H 0.113 0.887 41 H 0.098 0.902 42 H 0.165 0.835 43 H 0.130 0.870 44 H 0.230 0.770 45 H -0.177 1.177 46 H -0.176 1.176 47 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 3.259 1.311 1.090 3.677 hybrid contribution -0.290 -0.299 -0.357 0.549 sum 2.969 1.012 0.732 3.221 Atomic orbital electron populations 1.20632 0.86665 1.04517 1.03719 1.20440 0.93832 0.85380 1.00437 1.20013 0.92619 0.92145 1.19412 1.17234 0.85217 0.83883 0.75403 1.90746 1.16587 1.84355 1.51163 1.45585 1.09645 1.05692 1.76096 1.21156 0.94420 0.78978 1.02978 1.20939 0.95423 0.97175 0.91667 1.19605 0.94278 0.98450 0.94365 1.21070 0.93976 1.00411 0.98367 1.21163 0.99896 0.99357 0.93078 1.21191 0.95825 0.98710 0.98438 1.21174 0.94588 0.99583 0.98082 1.20977 0.99862 0.99543 0.92545 1.23236 0.98169 1.01057 0.94048 1.22616 0.87521 0.95093 0.92645 0.91105 1.86514 1.35682 1.38464 1.74397 1.23682 1.03164 0.95497 0.96616 1.21729 0.96100 0.92482 1.08011 1.20743 0.85026 0.94772 1.11916 1.24873 1.02944 0.97058 0.91164 1.86492 1.96979 1.35900 1.15625 0.94223 0.74378 0.81485 0.88490 1.41553 1.05432 1.08760 1.57381 0.90239 0.91602 0.87740 0.76853 0.91886 0.88709 0.85823 0.86042 0.86178 0.86083 0.86188 0.89746 0.88070 0.77025 0.88682 0.90199 0.83517 0.86977 0.76984 1.17724 1.17590 0.74437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.11 9.88 36.01 0.36 0.24 16 2 C 0.12 0.25 7.17 -81.88 -0.59 -0.34 16 3 C -0.23 -0.70 6.29 -103.35 -0.65 -1.35 16 4 C 0.59 2.65 7.81 -12.59 -0.10 2.55 16 5 O -0.55 -4.07 14.81 5.25 0.08 -4.00 16 6 N -0.72 -1.36 5.05 -61.43 -0.31 -1.67 16 7 C 0.15 0.24 4.87 -4.04 -0.02 0.22 16 8 C -0.05 0.04 0.64 -154.84 -0.10 -0.06 16 9 C -0.07 0.00 4.85 -104.62 -0.51 -0.51 16 10 C -0.12 0.05 9.05 -39.58 -0.36 -0.31 16 11 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 12 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 13 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 14 C -0.11 -0.08 9.23 -39.58 -0.37 -0.45 16 15 C -0.13 0.21 5.89 -25.92 -0.15 0.06 16 16 C 0.08 -0.13 5.27 -25.92 -0.14 -0.27 16 17 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 18 O -0.54 0.18 11.58 -35.23 -0.41 -0.22 16 19 C -0.15 0.25 6.93 -25.91 -0.18 0.07 16 20 C -0.16 -0.11 9.03 -37.50 -0.34 -0.45 16 21 C -0.01 0.00 6.48 -81.87 -0.53 -0.53 16 22 C -0.05 0.04 3.08 36.01 0.11 0.15 16 23 O -0.54 0.32 12.88 -35.23 -0.45 -0.13 16 24 Si 0.71 -1.34 30.56 -169.99 -5.20 -6.53 16 25 N -0.54 -0.18 5.90 -5.42 -0.03 -0.22 16 26 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.10 0.32 6.46 -51.93 -0.34 -0.02 16 29 H 0.40 0.04 7.09 -40.82 -0.29 -0.25 16 30 H 0.06 0.17 7.80 -51.93 -0.41 -0.23 16 31 H 0.09 0.29 6.05 -51.93 -0.31 -0.02 16 32 H 0.12 -0.30 6.41 -52.49 -0.34 -0.63 16 33 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 34 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 35 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 36 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 37 H 0.08 -0.08 7.41 -51.93 -0.38 -0.46 16 38 H 0.10 -0.29 6.79 -51.93 -0.35 -0.64 16 39 H 0.38 -1.51 9.12 45.56 0.42 -1.09 16 40 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 41 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 42 H 0.15 -0.23 5.86 -52.49 -0.31 -0.54 16 43 H 0.11 -0.06 7.96 -51.93 -0.41 -0.48 16 44 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 45 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 46 H -0.25 -0.11 7.11 56.52 0.40 0.30 16 47 H 0.42 -0.66 8.96 -40.82 -0.37 -1.02 16 LS Contribution 383.06 15.07 5.77 5.77 Total: 0.00 -9.15 383.06 -10.99 -20.14 By element: Atomic # 1 Polarization: -5.12 SS G_CDS: -5.69 Total: -10.81 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -4.75 Total: -2.32 kcal Atomic # 7 Polarization: -1.55 SS G_CDS: -0.34 Total: -1.89 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.78 Total: -4.35 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.20 Total: -6.53 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.15 -10.99 -20.14 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_9865296.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.969 kcal (2) G-P(sol) polarization free energy of solvation -9.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.178 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.136 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds