Wall clock time and date at job start Sat Mar 6 2021 21:27:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42902 * 109.47352 * 2 1 4 4 C 1.35892 * 117.00388 * 275.32506 * 3 2 1 5 5 C 1.38737 * 120.05260 * 5.08598 * 4 3 2 6 6 C 1.38145 * 119.94071 * 179.74741 * 5 4 3 7 7 C 1.38270 * 120.05954 * 0.49885 * 6 5 4 8 8 C 1.50695 * 119.94628 * 179.74861 * 7 6 5 9 9 O 1.42902 * 109.46882 * 245.02507 * 8 7 6 10 10 Si 1.86301 * 109.47189 * 5.02477 * 8 7 6 11 11 C 1.38269 * 120.10535 * 359.77368 * 7 6 5 12 12 C 1.38143 * 120.05952 * 359.97438 * 11 7 6 13 13 C 1.50701 * 109.47231 * 120.00085 * 2 1 3 14 14 O 1.21274 * 120.00309 * 244.99713 * 13 2 1 15 15 N 1.34775 * 119.99868 * 64.99994 * 13 2 1 16 16 C 1.46504 * 120.00160 * 179.97438 * 15 13 2 17 17 H 1.08994 * 112.90444 * 336.25291 * 16 15 13 18 18 C 1.53784 * 113.61336 * 107.50486 * 16 15 13 19 19 C 1.53776 * 87.08088 * 89.11813 * 18 16 15 20 20 H 1.09001 * 113.61000 * 270.87950 * 19 18 16 21 21 C 1.53003 * 113.61443 * 139.98358 * 19 18 16 22 22 O 1.42900 * 109.47226 * 87.49872 * 21 19 18 23 23 C 1.53776 * 87.08523 * 25.42938 * 19 18 16 24 24 H 1.09002 * 109.46858 * 59.99559 * 1 2 3 25 25 H 1.08994 * 109.46948 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46915 * 299.99650 * 1 2 3 27 27 H 1.09004 * 109.47306 * 240.00538 * 2 1 3 28 28 H 1.08003 * 120.03004 * 359.97438 * 5 4 3 29 29 H 1.08000 * 119.96950 * 180.27611 * 6 5 4 30 30 H 1.08998 * 109.46861 * 125.02559 * 8 7 6 31 31 H 0.96695 * 114.00134 * 60.00369 * 9 8 7 32 32 H 1.48495 * 109.99931 * 180.02562 * 10 8 7 33 33 H 1.48498 * 110.00058 * 301.31709 * 10 8 7 34 34 H 1.07999 * 119.96906 * 179.97438 * 11 7 6 35 35 H 1.07998 * 120.03055 * 179.97438 * 12 11 7 36 36 H 0.97005 * 120.00080 * 359.97438 * 15 13 2 37 37 H 1.08999 * 113.61157 * 334.56218 * 18 16 15 38 38 H 1.09002 * 113.68741 * 203.67822 * 18 16 15 39 39 H 1.08998 * 109.47156 * 207.50044 * 21 19 18 40 40 H 1.09002 * 109.46754 * 327.49894 * 21 19 18 41 41 H 0.96695 * 113.99956 * 179.97438 * 22 21 19 42 42 H 1.09006 * 113.61254 * 89.11404 * 23 19 18 43 43 H 1.08999 * 113.61561 * 220.01903 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1062 1.9665 -1.2055 5 6 1.6544 1.3304 -2.3528 6 6 1.7522 1.9641 -3.5764 7 6 2.3091 3.2270 -3.6598 8 6 2.4196 3.9136 -4.9967 9 8 3.7982 4.0835 -5.3323 10 14 1.5869 2.8742 -6.2994 11 6 2.7651 3.8606 -2.5186 12 6 2.6649 3.2333 -1.2919 13 6 2.0324 -0.7104 1.2304 14 8 2.6530 -0.0980 2.0734 15 7 1.7919 -2.0264 1.3941 16 6 2.2807 -2.7172 2.5900 17 1 3.1340 -2.2182 3.0492 18 6 1.1694 -3.0813 3.5886 19 6 1.0206 -4.4049 2.8199 20 1 0.3124 -4.3522 1.9930 21 6 0.7904 -5.6168 3.7250 22 8 -0.6085 -5.7647 3.9763 23 6 2.4859 -4.2279 2.3881 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8934 -0.5138 -0.8900 28 1 1.2234 0.3422 -2.2888 29 1 1.3966 1.4712 -4.4692 30 1 1.9353 4.8887 -4.9455 31 1 4.2927 3.2549 -5.3954 32 1 1.6895 3.5401 -7.6227 33 1 2.2174 1.5310 -6.3571 34 1 3.2001 4.8468 -2.5864 35 1 3.0217 3.7285 -0.4009 36 1 1.2952 -2.5162 0.7201 37 1 0.2933 -2.4363 3.5212 38 1 1.5240 -3.2080 4.6115 39 1 1.1682 -6.5137 3.2343 40 1 1.3157 -5.4703 4.6688 41 1 -0.8288 -6.5155 4.5445 42 1 3.2018 -4.6679 3.0824 43 1 2.6726 -4.5085 1.3515 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_10157680.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:58 Heat of formation + Delta-G solvation = -95.047583 kcal Electronic energy + Delta-G solvation = -25000.888682 eV Core-core repulsion = 21207.210295 eV Total energy + Delta-G solvation = -3793.678387 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.88398 -41.10663 -39.85701 -38.86626 -37.37047 -37.18500 -34.73409 -33.11186 -31.88796 -31.52076 -28.95100 -26.85445 -26.74936 -25.61905 -24.27674 -23.45985 -22.50491 -21.56944 -20.42510 -19.55184 -18.67949 -18.31023 -18.18196 -17.26525 -16.88403 -16.81755 -16.51020 -16.22537 -15.97237 -15.92015 -15.61390 -15.49526 -15.24823 -14.72792 -14.57715 -14.47159 -14.08213 -13.83207 -13.63294 -13.58496 -13.43647 -13.36674 -13.14907 -12.93416 -12.26733 -12.11608 -12.07940 -11.96154 -11.74639 -11.57564 -11.52843 -10.94162 -10.83928 -10.57169 -10.18469 -10.04074 -9.21650 -4.98217 0.28197 0.29546 1.28145 1.42029 1.44794 1.56475 1.95085 2.42498 2.64805 3.02299 3.30494 3.36312 3.39764 3.51028 3.53183 3.64615 3.68551 3.75305 3.81719 3.85513 3.95646 4.21127 4.24774 4.28605 4.38393 4.41389 4.44789 4.48929 4.54234 4.55857 4.60124 4.66471 4.70276 4.89101 4.95193 4.95688 4.95901 5.04673 5.16505 5.25437 5.45045 5.50068 5.68500 6.21270 6.36528 6.41613 6.59237 7.05835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.209 4.209 6 C -0.077 4.077 7 C -0.155 4.155 8 C -0.070 4.070 9 O -0.530 6.530 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.146 4.146 13 C 0.522 3.478 14 O -0.509 6.509 15 N -0.709 5.709 16 C 0.120 3.880 17 H 0.107 0.893 18 C -0.143 4.143 19 C -0.112 4.112 20 H 0.097 0.903 21 C 0.084 3.916 22 O -0.574 6.574 23 C -0.138 4.138 24 H 0.080 0.920 25 H 0.079 0.921 26 H 0.077 0.923 27 H 0.100 0.900 28 H 0.133 0.867 29 H 0.130 0.870 30 H 0.117 0.883 31 H 0.375 0.625 32 H -0.258 1.258 33 H -0.261 1.261 34 H 0.134 0.866 35 H 0.136 0.864 36 H 0.402 0.598 37 H 0.074 0.926 38 H 0.093 0.907 39 H 0.047 0.953 40 H 0.049 0.951 41 H 0.381 0.619 42 H 0.099 0.901 43 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.117 -5.936 -0.974 6.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.196 6.196 4 C 0.091 3.909 5 C -0.227 4.227 6 C -0.094 4.094 7 C -0.156 4.156 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.586 3.414 11 C -0.068 4.068 12 C -0.165 4.165 13 C 0.306 3.694 14 O -0.382 6.382 15 N -0.362 5.362 16 C 0.015 3.985 17 H 0.125 0.875 18 C -0.182 4.182 19 C -0.130 4.130 20 H 0.115 0.885 21 C 0.006 3.994 22 O -0.380 6.380 23 C -0.176 4.176 24 H 0.099 0.901 25 H 0.098 0.902 26 H 0.096 0.904 27 H 0.118 0.882 28 H 0.151 0.849 29 H 0.147 0.853 30 H 0.135 0.865 31 H 0.223 0.777 32 H -0.183 1.183 33 H -0.187 1.187 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.237 0.763 37 H 0.093 0.907 38 H 0.111 0.889 39 H 0.065 0.935 40 H 0.067 0.933 41 H 0.228 0.772 42 H 0.118 0.882 43 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.705 -4.675 -1.289 5.553 hybrid contribution 0.865 -1.249 0.118 1.524 sum -1.840 -5.924 -1.171 6.313 Atomic orbital electron populations 1.22361 0.92109 1.04013 1.05040 1.22185 0.96062 0.83251 0.97831 1.86231 1.80851 1.25389 1.27091 1.19090 0.95091 0.92788 0.83946 1.21206 1.07392 1.01726 0.92407 1.20830 0.97298 0.94111 0.97186 1.20180 1.03568 0.95691 0.96165 1.24954 0.87254 1.07397 0.98403 1.86604 1.20255 1.35265 1.91527 0.95064 0.90512 0.77616 0.78219 1.20868 0.95921 0.99559 0.90477 1.20545 1.03265 0.93610 0.99059 1.20087 0.79796 0.82096 0.87425 1.90777 1.38620 1.65461 1.43382 1.45510 1.58202 1.08844 1.23693 1.21847 0.98087 0.92513 0.86080 0.87472 1.23486 0.99362 0.96558 0.98779 1.22613 0.96949 0.94440 0.99003 0.88486 1.22192 0.82167 0.97181 0.97875 1.86483 1.23951 1.54303 1.73246 1.23343 0.96484 0.94840 1.02918 0.90079 0.90176 0.90361 0.88219 0.84942 0.85292 0.86469 0.77705 1.18280 1.18652 0.84805 0.84654 0.76302 0.90710 0.88856 0.93464 0.93304 0.77186 0.88210 0.90323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.42 9.12 37.16 0.34 0.76 16 2 C 0.07 -0.02 2.64 -27.88 -0.07 -0.09 16 3 O -0.28 -0.85 9.34 -39.26 -0.37 -1.22 16 4 C 0.14 0.25 6.60 -39.22 -0.26 -0.01 16 5 C -0.21 0.05 8.23 -39.43 -0.32 -0.28 16 6 C -0.08 0.04 8.66 -39.60 -0.34 -0.31 16 7 C -0.16 -0.04 5.35 -104.60 -0.56 -0.60 16 8 C -0.07 0.01 2.80 36.00 0.10 0.11 16 9 O -0.53 -0.74 12.83 -35.23 -0.45 -1.19 16 10 Si 0.68 -0.75 29.88 -169.99 -5.08 -5.83 16 11 C -0.05 -0.05 9.68 -39.60 -0.38 -0.43 16 12 C -0.15 -0.27 9.99 -39.43 -0.39 -0.66 16 13 C 0.52 0.92 7.18 -10.99 -0.08 0.84 16 14 O -0.51 -3.38 16.11 -14.30 -0.23 -3.61 16 15 N -0.71 0.96 5.22 -53.02 -0.28 0.68 16 16 C 0.12 -0.11 4.32 -67.11 -0.29 -0.40 16 17 H 0.11 0.10 7.47 -51.93 -0.39 -0.29 16 18 C -0.14 0.12 7.43 -25.92 -0.19 -0.07 16 19 C -0.11 0.21 3.89 -89.81 -0.35 -0.13 16 20 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 21 C 0.08 -0.15 6.88 37.16 0.26 0.11 16 22 O -0.57 0.04 13.66 -35.23 -0.48 -0.44 16 23 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 24 H 0.08 -0.23 6.91 -51.93 -0.36 -0.59 16 25 H 0.08 -0.37 7.92 -51.93 -0.41 -0.78 16 26 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.10 -0.27 6.31 -51.93 -0.33 -0.60 16 28 H 0.13 -0.36 5.43 -52.48 -0.29 -0.64 16 29 H 0.13 -0.30 4.83 -52.49 -0.25 -0.55 16 30 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 31 H 0.38 -0.51 8.70 45.56 0.40 -0.11 16 32 H -0.26 -0.61 7.11 56.52 0.40 -0.20 16 33 H -0.26 -0.16 7.01 56.52 0.40 0.23 16 34 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 35 H 0.14 0.20 8.06 -52.49 -0.42 -0.23 16 36 H 0.40 -1.71 8.48 -40.82 -0.35 -2.06 16 37 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 39 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.05 -0.12 7.84 -51.93 -0.41 -0.53 16 41 H 0.38 -1.56 9.12 45.56 0.42 -1.14 16 42 H 0.10 -0.35 8.10 -51.93 -0.42 -0.78 16 43 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 LS Contribution 355.11 15.07 5.35 5.35 Total: 0.00 -9.97 355.11 -9.65 -19.62 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -5.37 Total: -12.42 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -2.74 Total: -0.95 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.28 Total: 0.68 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.53 Total: -6.46 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.08 Total: -5.83 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.97 -9.65 -19.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_10157680.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.429 kcal (2) G-P(sol) polarization free energy of solvation -9.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.048 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds