Wall clock time and date at job start Sat Mar 6 2021 21:28:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86305 * 109.46971 * 2 1 4 4 C 1.50702 * 109.47091 * 119.99876 * 2 1 3 5 5 C 1.38422 * 119.88898 * 244.72670 * 4 2 1 6 6 C 1.38241 * 120.33648 * 180.27941 * 5 4 2 7 7 C 1.38277 * 120.12184 * 359.97438 * 6 5 4 8 8 F 1.35093 * 120.11195 * 180.02562 * 7 6 5 9 9 C 1.39862 * 119.77524 * 359.97438 * 7 6 5 10 10 C 1.47698 * 120.16666 * 179.97438 * 9 7 6 11 11 O 1.21579 * 119.99526 * 0.02562 * 10 9 7 12 12 N 1.34774 * 120.00202 * 180.02562 * 10 9 7 13 13 C 1.46498 * 119.99723 * 180.02562 * 12 10 9 14 14 H 1.09004 * 112.85464 * 336.19720 * 13 12 10 15 15 C 1.53779 * 113.61582 * 107.50505 * 13 12 10 16 16 C 1.53781 * 87.08305 * 89.11182 * 15 13 12 17 17 H 1.08999 * 113.61638 * 270.88705 * 16 15 13 18 18 C 1.53003 * 113.69275 * 139.99022 * 16 15 13 19 19 O 1.42904 * 109.46634 * 87.46546 * 18 16 15 20 20 C 1.53781 * 113.61140 * 204.99990 * 13 12 10 21 21 C 1.37895 * 119.89119 * 65.00321 * 4 2 1 22 22 H 0.96697 * 113.99938 * 299.99568 * 1 2 3 23 23 H 1.08994 * 109.47070 * 240.00109 * 2 1 3 24 24 H 1.48492 * 109.99807 * 178.68182 * 3 2 1 25 25 H 1.48499 * 109.99628 * 299.99874 * 3 2 1 26 26 H 1.08004 * 119.82908 * 0.27606 * 5 4 2 27 27 H 1.08008 * 119.93730 * 179.97438 * 6 5 4 28 28 H 0.96991 * 120.00032 * 0.02562 * 12 10 9 29 29 H 1.09001 * 113.61419 * 203.66217 * 15 13 12 30 30 H 1.09000 * 113.61162 * 334.56787 * 15 13 12 31 31 H 1.08998 * 109.47196 * 207.46442 * 18 16 15 32 32 H 1.09004 * 109.46905 * 327.47105 * 18 16 15 33 33 H 0.96699 * 113.99632 * 180.02562 * 19 18 16 34 34 H 1.09000 * 113.61850 * 25.43391 * 20 13 12 35 35 H 1.09005 * 113.61491 * 156.25150 * 20 13 12 36 36 H 1.08000 * 120.05742 * 359.73978 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6444 -0.0103 2.1884 6 6 3.1145 -0.6540 3.3179 7 6 2.8742 -2.0037 3.4980 8 9 3.3332 -2.6324 4.6021 9 6 2.1534 -2.7156 2.5338 10 6 1.8922 -4.1577 2.7171 11 8 2.3038 -4.7287 3.7084 12 7 1.1977 -4.8406 1.7856 13 6 0.9383 -6.2709 1.9678 14 1 1.6616 -6.7518 2.6264 15 6 -0.5245 -6.5920 2.3171 16 6 -0.7835 -6.6834 0.8040 17 1 -1.0611 -5.7320 0.3503 18 6 -1.7208 -7.8262 0.4086 19 8 -3.0754 -7.3755 0.4743 20 6 0.7072 -7.0279 0.6493 21 6 1.6841 -2.0569 1.3957 22 1 -0.3933 0.4416 0.7651 23 1 1.7923 -0.5138 -0.8899 24 1 3.5345 1.7703 0.0321 25 1 1.5615 2.4678 -1.2085 26 1 2.8344 1.0442 2.0526 27 1 3.6704 -0.1015 4.0610 28 1 0.8697 -4.3851 0.9946 29 1 -0.6505 -7.5403 2.8397 30 1 -1.0489 -5.7679 2.8008 31 1 -1.4936 -8.1473 -0.6079 32 1 -1.5827 -8.6629 1.0935 33 1 -3.7262 -8.0499 0.2362 34 1 1.1772 -6.5557 -0.2135 35 1 0.9193 -8.0950 0.7155 36 1 1.1278 -2.6006 0.6465 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13270474_12335834.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:15 Heat of formation + Delta-G solvation = -107.121858 kcal Electronic energy + Delta-G solvation = -21989.390867 eV Core-core repulsion = 18355.492354 eV Total energy + Delta-G solvation = -3633.898513 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.04443 -41.67737 -40.49043 -39.42182 -37.46247 -37.25826 -34.72243 -32.57722 -32.25322 -28.87515 -26.76191 -26.63566 -25.63192 -23.83514 -22.90378 -21.76548 -20.37796 -19.28302 -18.40159 -18.30667 -18.21651 -17.36765 -17.06719 -16.93945 -16.34511 -16.13239 -16.00552 -15.75655 -15.67318 -15.61109 -14.94887 -14.63488 -14.43203 -14.38008 -13.71728 -13.59256 -13.47018 -13.23372 -13.10127 -12.86856 -12.17602 -11.89500 -11.84335 -11.70045 -11.44726 -11.27096 -10.80793 -10.47215 -10.44568 -10.16046 -9.85525 -4.96708 -0.53691 -0.06127 1.30926 1.54210 1.67435 1.85949 2.02222 2.43374 3.01677 3.19371 3.32508 3.39230 3.45019 3.56358 3.64274 3.65285 3.78269 3.97804 4.06156 4.10106 4.36689 4.41634 4.51667 4.56126 4.61024 4.66738 4.71804 4.74042 4.75912 4.83023 4.92091 4.97627 5.06790 5.11074 5.12220 5.49130 5.57125 6.28236 6.78150 6.88219 6.97444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.068 4.068 3 Si 0.772 3.228 4 C -0.134 4.134 5 C -0.048 4.048 6 C -0.151 4.151 7 C 0.134 3.866 8 F -0.136 7.136 9 C -0.190 4.190 10 C 0.555 3.445 11 O -0.570 6.570 12 N -0.693 5.693 13 C 0.109 3.891 14 H 0.088 0.912 15 C -0.145 4.145 16 C -0.108 4.108 17 H 0.093 0.907 18 C 0.081 3.919 19 O -0.598 6.598 20 C -0.121 4.121 21 C -0.026 4.026 22 H 0.397 0.603 23 H 0.118 0.882 24 H -0.280 1.280 25 H -0.302 1.302 26 H 0.171 0.829 27 H 0.170 0.830 28 H 0.413 0.587 29 H 0.097 0.903 30 H 0.056 0.944 31 H 0.061 0.939 32 H 0.056 0.944 33 H 0.396 0.604 34 H 0.090 0.910 35 H 0.113 0.887 36 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.877 2.648 -4.066 5.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.178 4.178 3 Si 0.678 3.322 4 C -0.135 4.135 5 C -0.066 4.066 6 C -0.169 4.169 7 C 0.113 3.887 8 F -0.115 7.115 9 C -0.194 4.194 10 C 0.344 3.656 11 O -0.450 6.450 12 N -0.345 5.345 13 C 0.004 3.996 14 H 0.106 0.894 15 C -0.183 4.183 16 C -0.127 4.127 17 H 0.111 0.889 18 C 0.003 3.997 19 O -0.407 6.407 20 C -0.159 4.159 21 C -0.045 4.045 22 H 0.247 0.753 23 H 0.135 0.865 24 H -0.207 1.207 25 H -0.230 1.230 26 H 0.188 0.812 27 H 0.187 0.813 28 H 0.252 0.748 29 H 0.115 0.885 30 H 0.074 0.926 31 H 0.079 0.921 32 H 0.075 0.925 33 H 0.245 0.755 34 H 0.108 0.892 35 H 0.131 0.869 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -0.726 3.012 -4.113 5.149 hybrid contribution -0.209 -1.270 -0.241 1.309 sum -0.935 1.743 -4.354 4.782 Atomic orbital electron populations 1.86500 1.16821 1.82098 1.50630 1.25160 0.85535 1.10631 0.96518 0.93813 0.78067 0.74919 0.85420 1.20490 1.00625 0.94185 0.98192 1.21398 0.93156 1.00943 0.91067 1.21414 1.03180 0.91299 1.01014 1.18209 0.95455 0.91803 0.83184 1.91558 1.86217 1.82933 1.50756 1.20032 1.07000 0.93641 0.98704 1.18367 0.77721 0.86818 0.82713 1.90837 1.52851 1.70860 1.30491 1.45450 1.55273 1.09844 1.23918 1.21937 0.97424 0.80558 0.99707 0.89409 1.23491 0.95382 1.02484 0.96967 1.22576 0.94482 0.99674 0.95927 0.88885 1.22277 0.81264 0.95629 1.00495 1.86446 1.17221 1.44334 1.92673 1.23284 0.94091 1.02145 0.96363 1.21180 0.94767 0.94352 0.94202 0.75254 0.86460 1.20678 1.22991 0.81188 0.81260 0.74820 0.88477 0.92555 0.92129 0.92550 0.75456 0.89185 0.86855 0.82803 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.90 12.83 -148.98 -1.91 0.99 16 2 C -0.07 0.44 2.80 71.24 0.20 0.64 16 3 Si 0.77 -5.51 29.79 68.60 2.04 -3.46 16 4 C -0.13 0.68 5.35 -19.90 -0.11 0.58 16 5 C -0.05 0.31 8.66 22.31 0.19 0.50 16 6 C -0.15 0.33 10.01 22.28 0.22 0.56 16 7 C 0.13 0.76 7.29 22.67 0.17 0.92 16 8 F -0.14 -1.73 15.55 44.97 0.70 -1.03 16 9 C -0.19 -0.82 5.88 -20.05 -0.12 -0.94 16 10 C 0.56 4.92 7.77 86.74 0.67 5.60 16 11 O -0.57 -10.36 14.94 -3.96 -0.06 -10.41 16 12 N -0.69 -1.31 5.21 -443.04 -2.31 -3.62 16 13 C 0.11 0.19 4.32 45.52 0.20 0.38 16 14 H 0.09 0.53 7.46 -2.38 -0.02 0.51 16 15 C -0.14 -0.21 7.43 31.12 0.23 0.02 16 16 C -0.11 0.21 3.88 -10.27 -0.04 0.17 16 17 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 18 C 0.08 -0.22 6.89 71.98 0.50 0.28 16 19 O -0.60 -0.59 13.66 -148.98 -2.04 -2.63 16 20 C -0.12 0.52 7.39 31.12 0.23 0.75 16 21 C -0.03 0.06 9.17 22.52 0.21 0.27 16 22 H 0.40 -5.08 8.70 -74.06 -0.64 -5.72 16 23 H 0.12 -0.72 7.96 -2.39 -0.02 -0.74 16 24 H -0.28 0.74 7.11 99.48 0.71 1.45 16 25 H -0.30 -0.47 7.11 99.48 0.71 0.24 16 26 H 0.17 -2.13 4.88 -2.91 -0.01 -2.14 16 27 H 0.17 -1.13 8.06 -2.91 -0.02 -1.15 16 28 H 0.41 -1.61 6.73 -92.72 -0.62 -2.23 16 29 H 0.10 0.04 7.90 -2.39 -0.02 0.02 16 30 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 31 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 32 H 0.06 -0.24 7.85 -2.38 -0.02 -0.26 16 33 H 0.40 -2.87 9.12 -74.06 -0.68 -3.55 16 34 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.11 -0.75 8.10 -2.38 -0.02 -0.77 16 36 H 0.15 -0.98 6.40 -2.91 -0.02 -1.00 16 Total: 0.00 -24.80 308.77 -1.78 -26.58 By element: Atomic # 1 Polarization: -15.37 SS G_CDS: -0.76 Total: -16.13 kcal Atomic # 6 Polarization: 7.17 SS G_CDS: 2.55 Total: 9.72 kcal Atomic # 7 Polarization: -1.31 SS G_CDS: -2.31 Total: -3.62 kcal Atomic # 8 Polarization: -8.04 SS G_CDS: -4.01 Total: -12.05 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.70 Total: -1.03 kcal Atomic # 14 Polarization: -5.51 SS G_CDS: 2.04 Total: -3.46 kcal Total: -24.80 -1.78 -26.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_12335834.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.546 kcal (2) G-P(sol) polarization free energy of solvation -24.796 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.343 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.779 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.576 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds