Wall clock time and date at job start Sat Mar 6 2021 21:28:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47412 * 2 1 4 4 C 1.50709 * 109.47280 * 120.00365 * 2 1 3 5 5 C 1.35083 * 126.07033 * 255.26494 * 4 2 1 6 6 N 1.35045 * 107.97373 * 180.14228 * 5 4 2 7 7 C 1.46499 * 125.92759 * 179.89408 * 6 5 4 8 8 C 1.50705 * 109.46962 * 124.71008 * 7 6 5 9 9 O 1.21275 * 119.99947 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99715 * 179.97438 * 8 7 6 11 11 C 1.46505 * 119.99597 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.91090 * 23.74977 * 11 10 8 13 13 C 1.53781 * 113.61334 * 154.99978 * 11 10 8 14 14 C 1.53786 * 87.17350 * 89.07333 * 13 11 10 15 15 H 1.09000 * 113.60973 * 270.92699 * 14 13 11 16 16 C 1.52990 * 113.61464 * 140.02626 * 14 13 11 17 17 O 1.42903 * 109.47168 * 175.00198 * 16 14 13 18 18 C 1.53781 * 113.61146 * 252.49455 * 11 10 8 19 19 N 1.40064 * 108.13957 * 359.62709 * 6 5 4 20 20 C 1.31625 * 108.11283 * 0.23238 * 19 6 5 21 21 C 1.48413 * 126.04417 * 180.02562 * 20 19 6 22 22 C 1.39325 * 120.12367 * 144.69885 * 21 20 19 23 23 C 1.38016 * 119.87791 * 179.70046 * 22 21 20 24 24 C 1.38320 * 120.12152 * 0.57520 * 23 22 21 25 25 C 1.38312 * 120.24202 * 359.72383 * 24 23 22 26 26 C 1.38029 * 120.11878 * 359.97438 * 25 24 23 27 27 H 0.96698 * 114.00098 * 59.99580 * 1 2 3 28 28 H 1.09007 * 109.46804 * 239.99491 * 2 1 3 29 29 H 1.48496 * 109.99714 * 60.00022 * 3 2 1 30 30 H 1.48496 * 109.99910 * 181.32335 * 3 2 1 31 31 H 1.07997 * 126.01728 * 0.02882 * 5 4 2 32 32 H 1.09000 * 109.47231 * 4.71761 * 7 6 5 33 33 H 1.08993 * 109.47055 * 244.71043 * 7 6 5 34 34 H 0.96995 * 120.00232 * 359.97438 * 10 8 7 35 35 H 1.09002 * 113.61445 * 203.66333 * 13 11 10 36 36 H 1.09002 * 113.61408 * 334.48063 * 13 11 10 37 37 H 1.09007 * 109.47036 * 294.99322 * 16 14 13 38 38 H 1.08994 * 109.47734 * 54.99728 * 16 14 13 39 39 H 0.96700 * 114.00200 * 179.97438 * 17 16 14 40 40 H 1.09005 * 113.61471 * 25.43638 * 18 11 10 41 41 H 1.08996 * 113.61178 * 156.24980 * 18 11 10 42 42 H 1.08003 * 120.05570 * 359.97438 * 22 21 20 43 43 H 1.08007 * 119.94043 * 180.29358 * 23 22 21 44 44 H 1.08005 * 119.87873 * 179.74082 * 24 23 22 45 45 H 1.07999 * 119.94628 * 179.97438 * 25 24 23 46 46 H 1.08001 * 120.06105 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.4584 -0.1247 2.3277 6 7 2.7886 -1.0992 3.2024 7 6 3.3932 -0.9011 4.5220 8 6 2.5390 -1.5656 5.5708 9 8 1.5254 -2.1477 5.2477 10 7 2.9022 -1.5137 6.8677 11 6 2.0720 -2.1602 7.8871 12 1 1.4558 -2.9644 7.4852 13 6 2.8484 -2.5538 9.1549 14 6 2.5198 -1.1535 9.6990 15 1 3.2596 -0.3978 9.4348 16 6 2.1620 -1.1423 11.1864 17 8 1.9879 0.2068 11.6243 18 6 1.2932 -1.1682 8.7671 19 7 2.4471 -2.3317 2.6314 20 6 1.9301 -2.1029 1.4428 21 6 1.4328 -3.1303 0.4942 22 6 0.3264 -2.8631 -0.3093 23 6 -0.1279 -3.8199 -1.1941 24 6 0.5058 -5.0468 -1.2755 25 6 1.6008 -5.3197 -0.4758 26 6 2.0673 -4.3677 0.4082 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5140 -0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7701 -0.0322 31 1 2.5937 0.9361 2.4782 32 1 3.4632 0.1660 4.7331 33 1 4.3907 -1.3401 4.5342 34 1 3.7135 -1.0491 7.1259 35 1 2.3824 -3.3618 9.7190 36 1 3.9123 -2.7168 8.9825 37 1 1.2364 -1.6969 11.3416 38 1 2.9651 -1.6087 11.7569 39 1 1.7585 0.2901 12.5600 40 1 1.1018 -0.2111 8.2818 41 1 0.4013 -1.5970 9.2239 42 1 -0.1720 -1.9073 -0.2430 43 1 -0.9826 -3.6121 -1.8208 44 1 0.1444 -5.7942 -1.9663 45 1 2.0917 -6.2793 -0.5430 46 1 2.9227 -4.5817 1.0319 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:54 Heat of formation + Delta-G solvation = 29.293285 kcal Electronic energy + Delta-G solvation = -29379.128852 eV Core-core repulsion = 25238.456619 eV Total energy + Delta-G solvation = -4140.672233 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.43874 -41.32958 -39.77950 -39.41568 -37.69850 -37.33832 -34.82375 -34.35549 -32.30765 -31.70051 -31.33451 -29.42507 -28.30287 -26.84723 -25.86183 -24.30308 -23.43533 -23.26690 -22.11309 -21.44685 -20.69520 -20.40896 -18.56389 -18.40949 -18.30542 -18.25570 -17.50611 -16.98784 -16.66092 -16.33063 -16.04670 -16.00098 -15.75747 -15.53043 -15.34470 -15.07855 -14.89775 -14.68776 -14.43953 -14.21723 -14.08578 -13.75451 -13.69620 -13.62522 -13.43921 -13.30759 -13.09229 -12.69484 -12.13470 -11.98313 -11.96860 -11.76478 -11.74747 -11.53052 -11.43078 -11.19190 -10.93507 -10.55533 -10.17621 -10.16544 -9.67089 -9.61751 -9.14652 -5.00236 0.28072 0.71121 0.78826 1.23088 1.33757 1.43246 1.63479 1.88635 1.95437 1.97825 3.02130 3.08512 3.28444 3.32091 3.45755 3.51518 3.57505 3.63243 3.71089 3.79878 3.83712 3.95589 4.12037 4.21488 4.24590 4.27840 4.38213 4.38762 4.44786 4.49373 4.56496 4.60163 4.64489 4.70930 4.79318 4.88684 4.94014 4.94237 4.95758 5.04552 5.17887 5.37735 5.44475 5.47235 5.77968 5.79769 5.83234 5.87469 6.26040 6.28633 6.58816 6.69311 6.73087 7.05605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.031 4.031 3 Si 0.686 3.314 4 C -0.205 4.205 5 C 0.060 3.940 6 N -0.358 5.358 7 C 0.116 3.884 8 C 0.501 3.499 9 O -0.499 6.499 10 N -0.712 5.712 11 C 0.121 3.879 12 H 0.106 0.894 13 C -0.137 4.137 14 C -0.111 4.111 15 H 0.097 0.903 16 C 0.084 3.916 17 O -0.574 6.574 18 C -0.143 4.143 19 N -0.248 5.248 20 C 0.136 3.864 21 C -0.020 4.020 22 C -0.100 4.100 23 C -0.125 4.125 24 C -0.112 4.112 25 C -0.127 4.127 26 C -0.092 4.092 27 H 0.380 0.620 28 H 0.074 0.926 29 H -0.254 1.254 30 H -0.256 1.256 31 H 0.172 0.828 32 H 0.127 0.873 33 H 0.120 0.880 34 H 0.402 0.598 35 H 0.099 0.901 36 H 0.078 0.922 37 H 0.049 0.951 38 H 0.048 0.952 39 H 0.381 0.619 40 H 0.072 0.928 41 H 0.092 0.908 42 H 0.155 0.845 43 H 0.125 0.875 44 H 0.122 0.878 45 H 0.124 0.876 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.958 3.227 0.505 4.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.143 4.143 3 Si 0.587 3.413 4 C -0.216 4.216 5 C -0.085 4.085 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.285 3.715 9 O -0.371 6.371 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.124 0.876 13 C -0.175 4.175 14 C -0.130 4.130 15 H 0.115 0.885 16 C 0.006 3.994 17 O -0.380 6.380 18 C -0.182 4.182 19 N -0.068 5.068 20 C -0.030 4.030 21 C -0.022 4.022 22 C -0.119 4.119 23 C -0.143 4.143 24 C -0.130 4.130 25 C -0.145 4.145 26 C -0.111 4.111 27 H 0.228 0.772 28 H 0.091 0.909 29 H -0.179 1.179 30 H -0.181 1.181 31 H 0.189 0.811 32 H 0.145 0.855 33 H 0.137 0.863 34 H 0.237 0.763 35 H 0.117 0.883 36 H 0.097 0.903 37 H 0.067 0.933 38 H 0.066 0.934 39 H 0.228 0.772 40 H 0.091 0.909 41 H 0.111 0.889 42 H 0.173 0.827 43 H 0.143 0.857 44 H 0.140 0.860 45 H 0.142 0.858 46 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.348 2.367 1.651 4.420 hybrid contribution 0.245 0.210 0.654 0.729 sum 3.593 2.577 2.306 4.986 Atomic orbital electron populations 1.86471 1.17968 1.80762 1.49781 1.23902 0.84968 1.09342 0.96067 0.95166 0.80861 0.77509 0.87794 1.19368 1.12091 0.92512 0.97627 1.22133 1.00938 0.94993 0.90418 1.47787 1.48753 1.04308 1.13102 1.21504 0.97187 1.03472 0.78752 1.20504 0.86621 0.81216 0.83184 1.90846 1.24788 1.40935 1.80548 1.45551 1.27960 1.57271 1.05772 1.21824 0.93219 0.96260 0.87168 0.87580 1.23332 1.01421 0.97019 0.95756 1.22652 0.99013 0.97791 0.93500 0.88511 1.22187 0.99364 0.83441 0.94413 1.86483 1.93432 1.26835 1.31261 1.23527 0.97333 1.00390 0.96920 1.77777 1.19285 1.01571 1.08181 1.20659 0.97994 0.92235 0.92159 1.17778 0.96762 0.91962 0.95713 1.21939 0.94882 1.01210 0.93899 1.21134 1.00297 0.93691 0.99221 1.21295 0.95718 0.97124 0.98904 1.21075 0.97357 0.99298 0.96740 1.21219 0.99683 0.92332 0.97875 0.77238 0.90856 1.17871 1.18094 0.81097 0.85486 0.86256 0.76332 0.88266 0.90324 0.93304 0.93420 0.77179 0.90885 0.88908 0.82741 0.85655 0.85967 0.85828 0.85958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.28 10.08 -35.23 -0.35 -0.63 16 2 C -0.03 -0.03 2.00 36.01 0.07 0.05 16 3 Si 0.69 -0.78 30.79 -169.99 -5.23 -6.01 16 4 C -0.20 -0.87 5.37 -104.75 -0.56 -1.43 16 5 C 0.06 0.19 9.96 -17.26 -0.17 0.02 16 6 N -0.36 -1.39 3.40 -62.58 -0.21 -1.60 16 7 C 0.12 -0.06 6.99 -5.19 -0.04 -0.10 16 8 C 0.50 1.10 7.86 -10.98 -0.09 1.01 16 9 O -0.50 -3.83 15.30 5.56 0.09 -3.75 16 10 N -0.71 0.65 5.26 -53.01 -0.28 0.37 16 11 C 0.12 -0.01 4.32 -67.11 -0.29 -0.30 16 12 H 0.11 0.23 7.47 -51.93 -0.39 -0.16 16 13 C -0.14 0.30 7.38 -25.92 -0.19 0.11 16 14 C -0.11 0.14 3.90 -89.67 -0.35 -0.21 16 15 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 16 C 0.08 -0.10 6.89 37.15 0.26 0.16 16 17 O -0.57 -0.25 13.66 -35.23 -0.48 -0.73 16 18 C -0.14 0.01 7.44 -25.78 -0.19 -0.19 16 19 N -0.25 -1.73 11.63 33.43 0.39 -1.34 16 20 C 0.14 0.85 6.74 -82.78 -0.56 0.29 16 21 C -0.02 -0.11 5.80 -104.90 -0.61 -0.72 16 22 C -0.10 -0.39 8.94 -39.26 -0.35 -0.74 16 23 C -0.13 -0.30 10.03 -39.63 -0.40 -0.70 16 24 C -0.11 -0.25 10.04 -39.52 -0.40 -0.65 16 25 C -0.13 -0.37 10.03 -39.63 -0.40 -0.77 16 26 C -0.09 -0.42 9.75 -39.25 -0.38 -0.80 16 27 H 0.38 -1.82 8.74 45.56 0.40 -1.42 16 28 H 0.07 0.00 7.84 -51.93 -0.41 -0.41 16 29 H -0.25 -0.36 7.03 56.52 0.40 0.04 16 30 H -0.26 -0.34 7.11 56.52 0.40 0.07 16 31 H 0.17 0.07 6.36 -52.49 -0.33 -0.26 16 32 H 0.13 -0.55 8.07 -51.93 -0.42 -0.97 16 33 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.40 -1.65 8.70 -40.82 -0.36 -2.01 16 35 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.05 -0.09 7.85 -51.93 -0.41 -0.50 16 38 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.38 -1.38 9.12 45.56 0.42 -0.97 16 40 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 41 H 0.09 -0.02 7.91 -51.93 -0.41 -0.43 16 42 H 0.16 0.49 4.52 -52.48 -0.24 0.25 16 43 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 44 H 0.12 0.01 8.06 -52.48 -0.42 -0.42 16 45 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 46 H 0.12 0.52 8.06 -52.49 -0.42 0.09 16 LS Contribution 385.33 15.07 5.81 5.81 Total: 0.00 -13.67 385.33 -10.50 -24.17 By element: Atomic # 1 Polarization: -5.75 SS G_CDS: -5.57 Total: -11.32 kcal Atomic # 6 Polarization: -0.31 SS G_CDS: -4.64 Total: -4.96 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -0.10 Total: -2.57 kcal Atomic # 8 Polarization: -4.36 SS G_CDS: -0.75 Total: -5.11 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.23 Total: -6.01 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -13.67 -10.50 -24.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.459 kcal (2) G-P(sol) polarization free energy of solvation -13.668 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.165 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds