Wall clock time and date at job start Sat Mar 6 2021 21:29:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39279 * 121.02828 * 2 1 4 4 C 1.46504 * 134.20639 * 0.02562 * 3 2 1 5 5 C 1.50702 * 126.59173 * 359.97438 * 4 3 2 6 6 O 1.42895 * 109.47401 * 285.00115 * 5 4 3 7 7 Si 1.86302 * 109.46743 * 164.99999 * 5 4 3 8 8 C 1.34169 * 106.80356 * 179.73368 * 4 3 2 9 9 N 1.36947 * 109.95494 * 0.39951 * 8 4 3 10 10 C 1.37151 * 110.11222 * 359.58470 * 9 8 4 11 11 N 1.32822 * 132.96567 * 180.28394 * 10 9 8 12 12 C 1.31307 * 121.89054 * 179.97438 * 11 10 9 13 13 C 1.39745 * 121.03355 * 179.97438 * 2 1 3 14 14 C 1.47673 * 120.45339 * 0.04210 * 13 2 1 15 15 O 1.21577 * 119.99810 * 5.94974 * 14 13 2 16 16 N 1.34775 * 120.00081 * 185.94533 * 14 13 2 17 17 C 1.46504 * 119.99919 * 180.02562 * 16 14 13 18 18 H 1.08996 * 112.84615 * 25.32950 * 17 16 14 19 19 C 1.53778 * 113.61361 * 156.53101 * 17 16 14 20 20 C 1.53777 * 87.08148 * 89.11409 * 19 17 16 21 21 H 1.09005 * 113.61603 * 270.80064 * 20 19 17 22 22 C 1.53005 * 113.61542 * 139.98264 * 20 19 17 23 23 O 1.42899 * 109.47237 * 174.99961 * 22 20 19 24 24 C 1.53781 * 113.60943 * 254.13886 * 17 16 14 25 25 H 1.09002 * 109.47226 * 96.28859 * 1 2 3 26 26 H 1.09005 * 109.47456 * 216.28337 * 1 2 3 27 27 H 1.09002 * 109.47570 * 336.28691 * 1 2 3 28 28 H 1.09001 * 109.47006 * 45.00651 * 5 4 3 29 29 H 0.96694 * 114.00475 * 180.02562 * 6 5 4 30 30 H 1.48505 * 110.00035 * 60.00075 * 7 5 4 31 31 H 1.48499 * 110.00224 * 181.31703 * 7 5 4 32 32 H 1.08005 * 125.02310 * 180.22307 * 8 4 3 33 33 H 0.96998 * 124.94845 * 179.85435 * 9 8 4 34 34 H 1.08005 * 119.31509 * 179.97438 * 12 11 10 35 35 H 0.96996 * 119.99880 * 359.97438 * 16 14 13 36 36 H 1.08999 * 113.61165 * 203.66826 * 19 17 16 37 37 H 1.08999 * 113.61154 * 334.56497 * 19 17 16 38 38 H 1.09009 * 109.46642 * 294.99850 * 22 20 19 39 39 H 1.08997 * 109.47047 * 54.99782 * 22 20 19 40 40 H 0.96699 * 113.99428 * 179.97438 * 23 22 20 41 41 H 1.08997 * 113.62225 * 25.42931 * 24 17 16 42 42 H 1.09005 * 113.61037 * 156.33664 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8515 2.6102 0.0005 5 6 0.4525 3.1705 0.0006 6 8 -0.1193 3.0243 -1.3008 7 14 0.5070 4.9762 0.4558 8 6 2.9947 3.3126 0.0062 9 7 4.0668 2.4605 0.0004 10 6 3.6347 1.1589 0.0000 11 7 4.2720 -0.0065 0.0002 12 6 3.6267 -1.1500 0.0002 13 6 2.2274 -1.1974 0.0005 14 6 1.5225 -2.4950 0.0002 15 8 0.3122 -2.5293 -0.1097 16 7 2.2208 -3.6413 0.1216 17 6 1.5215 -4.9287 0.1207 18 1 0.5657 -4.8907 -0.4017 19 6 2.4085 -6.1113 -0.3029 20 6 2.7866 -6.2572 1.1805 21 1 3.6536 -5.6637 1.4707 22 6 2.8776 -7.7107 1.6497 23 8 3.3448 -7.7471 2.9997 24 6 1.4393 -5.5859 1.5085 25 1 -0.3634 -0.1126 -1.0215 26 1 -0.3634 -0.8284 0.6082 27 1 -0.3634 0.9409 0.4133 28 1 -0.1549 2.6308 0.7271 29 1 -1.0213 3.3647 -1.3746 30 1 1.3323 5.7232 -0.5271 31 1 -0.8693 5.5330 0.4906 32 1 3.0597 4.3906 0.0114 33 1 4.9965 2.7373 0.0008 34 1 4.1869 -2.0734 0.0000 35 1 3.1865 -3.6140 0.2088 36 1 1.8475 -6.9590 -0.6960 37 1 3.2446 -5.8235 -0.9403 38 1 1.8920 -8.1729 1.5937 39 1 3.5716 -8.2561 1.0102 40 1 3.4266 -8.6393 3.3635 41 1 1.4935 -4.8746 2.3326 42 1 0.6137 -6.2904 1.6098 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_12890568.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:04 Heat of formation + Delta-G solvation = -9.352191 kcal Electronic energy + Delta-G solvation = -26502.827951 eV Core-core repulsion = 22644.243684 eV Total energy + Delta-G solvation = -3858.584267 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.79044 -41.31419 -39.82627 -38.52767 -37.81596 -37.25728 -35.07868 -34.32425 -32.00363 -31.01906 -29.01323 -28.51876 -26.74768 -26.44777 -24.78100 -24.07202 -23.19967 -21.95190 -20.41847 -20.26211 -19.16593 -18.68048 -18.49493 -18.24579 -17.55688 -17.15405 -16.66012 -16.40124 -16.13328 -15.88919 -15.62181 -15.50414 -15.24234 -15.05707 -14.66437 -14.55538 -14.07821 -13.94490 -13.67700 -13.57053 -13.52238 -13.32979 -13.19827 -13.01592 -12.87759 -12.62746 -11.98798 -11.84646 -11.64169 -11.42127 -11.08511 -10.98423 -10.84701 -10.34847 -10.19183 -10.02363 -9.53383 -9.07841 -5.01060 -0.18272 0.00020 1.22932 1.39952 1.52694 1.66589 1.90335 1.95537 2.09625 2.88241 3.11795 3.29006 3.37411 3.44538 3.60436 3.62091 3.71165 3.77801 3.79696 3.85711 4.05458 4.11779 4.15509 4.32518 4.34730 4.40533 4.47254 4.53888 4.66145 4.69312 4.70194 4.80150 4.85005 4.98443 5.05218 5.06792 5.11354 5.17575 5.26405 5.38650 5.53422 5.64904 5.81909 6.15283 6.48932 6.50958 6.66469 6.90317 7.28106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.503 5.503 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.576 3.424 15 O -0.528 6.528 16 N -0.711 5.711 17 C 0.122 3.878 18 H 0.106 0.894 19 C -0.139 4.139 20 C -0.112 4.112 21 H 0.097 0.903 22 C 0.084 3.916 23 O -0.574 6.574 24 C -0.143 4.143 25 H 0.086 0.914 26 H 0.097 0.903 27 H 0.067 0.933 28 H 0.078 0.922 29 H 0.378 0.622 30 H -0.253 1.253 31 H -0.258 1.258 32 H 0.184 0.816 33 H 0.426 0.574 34 H 0.162 0.838 35 H 0.399 0.601 36 H 0.098 0.902 37 H 0.078 0.922 38 H 0.048 0.952 39 H 0.047 0.953 40 H 0.380 0.620 41 H 0.074 0.926 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.683 -0.052 1.963 2.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.364 3.636 15 O -0.406 6.406 16 N -0.363 5.363 17 C 0.016 3.984 18 H 0.124 0.876 19 C -0.177 4.177 20 C -0.131 4.131 21 H 0.115 0.885 22 C 0.006 3.994 23 O -0.379 6.379 24 C -0.182 4.182 25 H 0.104 0.896 26 H 0.116 0.884 27 H 0.085 0.915 28 H 0.096 0.904 29 H 0.226 0.774 30 H -0.177 1.177 31 H -0.182 1.182 32 H 0.201 0.799 33 H 0.265 0.735 34 H 0.179 0.821 35 H 0.235 0.765 36 H 0.117 0.883 37 H 0.097 0.903 38 H 0.066 0.934 39 H 0.065 0.935 40 H 0.227 0.773 41 H 0.093 0.907 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.231 1.303 1.417 2.946 hybrid contribution -0.598 -0.857 -0.728 1.273 sum 1.633 0.447 0.689 1.828 Atomic orbital electron populations 1.21164 0.88927 1.03530 1.04222 1.19878 0.97076 0.89168 0.86192 1.19460 0.92865 0.93505 1.09686 1.19419 0.93138 0.90565 1.10919 1.24162 0.92095 1.11185 0.87963 1.86642 1.33650 1.83890 1.29811 0.95248 0.83409 0.74073 0.89140 1.21715 0.84997 0.95927 1.02835 1.41484 1.09577 1.02673 1.63735 1.18474 0.89271 0.85900 0.98808 1.66434 1.40530 0.95985 1.18647 1.22493 0.90068 0.94441 0.91830 1.20393 0.94766 0.93629 1.15367 1.17859 0.86815 0.83183 0.75773 1.90752 1.13535 1.86952 1.49345 1.45557 1.10502 1.05101 1.75127 1.21802 0.97058 0.81857 0.97637 0.87552 1.23334 1.00215 0.98287 0.95836 1.22666 0.99008 0.95730 0.95665 0.88474 1.22198 0.97830 0.96338 0.83029 1.86493 1.89449 1.33650 1.28357 1.23528 0.97169 0.99863 0.97636 0.89606 0.88417 0.91467 0.90434 0.77400 1.17705 1.18244 0.79912 0.73520 0.82121 0.76502 0.88322 0.90327 0.93359 0.93507 0.77279 0.90743 0.89002 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.37 8.69 36.01 0.31 -0.05 16 2 C 0.09 0.31 5.98 -103.67 -0.62 -0.31 16 3 C -0.15 -0.51 6.16 -105.13 -0.65 -1.16 16 4 C -0.13 -0.20 5.61 -102.73 -0.58 -0.77 16 5 C -0.04 0.01 2.05 36.01 0.07 0.08 16 6 O -0.53 -0.62 12.86 -35.23 -0.45 -1.08 16 7 Si 0.68 -1.27 30.79 -169.99 -5.23 -6.51 16 8 C 0.07 -0.04 10.44 -16.70 -0.17 -0.21 16 9 N -0.57 -0.04 6.04 -12.12 -0.07 -0.11 16 10 C 0.31 0.95 8.42 -155.71 -1.31 -0.37 16 11 N -0.50 -1.62 10.37 -11.96 -0.12 -1.74 16 12 C 0.18 0.29 10.67 -17.11 -0.18 0.11 16 13 C -0.23 -0.66 5.89 -104.82 -0.62 -1.27 16 14 C 0.58 1.68 7.72 -12.41 -0.10 1.59 16 15 O -0.53 -3.01 13.11 5.30 0.07 -2.94 16 16 N -0.71 -0.05 5.22 -54.01 -0.28 -0.33 16 17 C 0.12 -0.02 4.30 -67.12 -0.29 -0.31 16 18 H 0.11 0.13 7.50 -51.93 -0.39 -0.26 16 19 C -0.14 0.29 7.38 -25.92 -0.19 0.10 16 20 C -0.11 0.11 3.90 -89.66 -0.35 -0.24 16 21 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 22 C 0.08 -0.09 6.89 37.16 0.26 0.17 16 23 O -0.57 -0.37 13.66 -35.23 -0.48 -0.85 16 24 C -0.14 0.01 7.45 -25.78 -0.19 -0.18 16 25 H 0.09 0.32 8.14 -51.93 -0.42 -0.10 16 26 H 0.10 0.38 5.95 -51.93 -0.31 0.08 16 27 H 0.07 0.10 5.05 -51.93 -0.26 -0.16 16 28 H 0.08 -0.09 6.05 -51.93 -0.31 -0.40 16 29 H 0.38 -1.04 8.74 45.56 0.40 -0.65 16 30 H -0.25 -0.11 7.05 56.52 0.40 0.29 16 31 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 32 H 0.18 -0.67 6.31 -52.48 -0.33 -1.00 16 33 H 0.43 -1.14 8.96 -40.82 -0.37 -1.50 16 34 H 0.16 -0.32 6.43 -52.48 -0.34 -0.65 16 35 H 0.40 -0.90 6.78 -40.82 -0.28 -1.18 16 36 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 37 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 38 H 0.05 -0.09 7.85 -51.92 -0.41 -0.50 16 39 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 41 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 LS Contribution 343.19 15.07 5.17 5.17 Total: 0.00 -10.64 343.19 -10.33 -20.98 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -4.33 Total: -9.77 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -4.60 Total: -2.82 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -0.48 Total: -2.18 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -0.86 Total: -4.87 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.23 Total: -6.51 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -10.64 -10.33 -20.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_12890568.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.626 kcal (2) G-P(sol) polarization free energy of solvation -10.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.335 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds