Wall clock time and date at job start Sat Mar 6 2021 21:29:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34655 * 124.84945 * 2 1 4 4 C 1.36775 * 108.39467 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94216 * 180.02562 * 4 3 2 6 6 O 1.21622 * 119.99731 * 179.97438 * 5 4 3 7 7 N 1.34781 * 119.99628 * 359.97438 * 5 4 3 8 8 C 1.46508 * 119.99487 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.84986 * 336.19879 * 8 7 5 10 10 C 1.53781 * 113.60990 * 107.50643 * 8 7 5 11 11 C 1.53774 * 87.08083 * 89.11626 * 10 8 7 12 12 H 1.09001 * 113.68947 * 270.87065 * 11 10 8 13 13 C 1.52998 * 113.61517 * 139.97746 * 11 10 8 14 14 O 1.42905 * 109.47048 * 87.50484 * 13 11 10 15 15 C 1.53774 * 87.08574 * 25.42870 * 11 10 8 16 16 C 1.46690 * 106.11279 * 359.97438 * 4 3 2 17 17 C 1.34485 * 106.33274 * 359.97438 * 16 4 3 18 18 C 1.50696 * 125.56785 * 179.97438 * 17 16 4 19 19 O 1.42902 * 109.47256 * 150.02585 * 18 17 16 20 20 Si 1.86305 * 109.47183 * 30.02907 * 18 17 16 21 21 H 1.08994 * 109.47738 * 270.03428 * 1 2 3 22 22 H 1.09004 * 109.46511 * 30.03297 * 1 2 3 23 23 H 1.08997 * 109.46809 * 150.02875 * 1 2 3 24 24 H 1.08005 * 125.80320 * 0.02562 * 3 2 1 25 25 H 0.96997 * 120.00150 * 0.02562 * 7 5 4 26 26 H 1.09004 * 113.60965 * 203.66338 * 10 8 7 27 27 H 1.08992 * 113.61429 * 334.55926 * 10 8 7 28 28 H 1.09004 * 109.47364 * 207.49931 * 13 11 10 29 29 H 1.08996 * 109.47599 * 327.50182 * 13 11 10 30 30 H 0.96701 * 114.00459 * 180.02562 * 14 13 11 31 31 H 1.09005 * 113.62071 * 220.02141 * 15 11 10 32 32 H 1.09002 * 113.69407 * 89.12877 * 15 11 10 33 33 H 1.08004 * 126.82773 * 180.26241 * 16 4 3 34 34 H 1.08995 * 109.47390 * 270.02687 * 18 17 16 35 35 H 0.96706 * 113.99852 * 300.00224 * 19 18 17 36 36 H 1.48499 * 109.99986 * 58.67523 * 20 18 17 37 37 H 1.48498 * 109.99919 * 179.97438 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5957 0.0013 6 8 5.8446 1.1127 0.0023 7 7 4.5734 2.9346 0.0009 8 6 5.7495 3.8081 0.0022 9 1 6.6368 3.3228 0.4087 10 6 5.9929 4.5155 -1.3414 11 6 5.0876 5.6445 -0.8213 12 1 4.0313 5.4980 -1.0469 13 6 5.5842 7.0451 -1.1854 14 8 5.0733 7.4131 -2.4683 15 6 5.4818 5.2007 0.5972 16 6 3.5375 -0.7493 0.0016 17 6 2.2447 -1.1197 0.0021 18 6 1.7397 -2.5396 0.0026 19 8 0.4807 -2.5972 0.6762 20 14 2.9647 -3.6340 0.8815 21 1 -0.3634 0.0006 1.0276 22 1 -0.3632 0.8898 -0.5144 23 1 -0.3633 -0.8902 -0.5134 24 1 1.8767 2.1241 0.0004 25 1 3.6831 3.3197 0.0006 26 1 7.0283 4.8207 -1.4928 27 1 5.5783 3.9823 -2.1968 28 1 5.2380 7.7591 -0.4381 29 1 6.6738 7.0484 -1.2137 30 1 5.3487 8.2915 -2.7642 31 1 4.6546 5.2207 1.3068 32 1 6.3773 5.6926 0.9772 33 1 4.3981 -1.4018 0.0062 34 1 1.6181 -2.8824 -1.0248 35 1 0.5139 -2.3058 1.5977 36 1 3.1635 -3.1580 2.2740 37 1 2.4780 -5.0370 0.8894 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_13287730.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:24 Heat of formation + Delta-G solvation = -39.028077 kcal Electronic energy + Delta-G solvation = -20216.733830 eV Core-core repulsion = 16962.504672 eV Total energy + Delta-G solvation = -3254.229159 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.47998 -41.00873 -39.15805 -37.92415 -37.21811 -34.24732 -33.71900 -31.40932 -28.95499 -27.58526 -26.71507 -26.28533 -24.15975 -23.05493 -21.01454 -20.73463 -20.12459 -19.11480 -18.25776 -17.50368 -17.15366 -16.85203 -16.77230 -16.10746 -15.84568 -15.68613 -15.46855 -15.34065 -14.96476 -14.65531 -14.33470 -14.05330 -13.56883 -13.52499 -13.41753 -13.30961 -13.24063 -12.96337 -12.37846 -11.94044 -11.84718 -11.59928 -11.39558 -10.98498 -10.84877 -10.74392 -9.93759 -9.56581 -9.21562 -4.91919 0.76562 1.04643 1.45251 1.65531 1.79067 2.03602 2.29200 2.69400 3.09278 3.12579 3.47541 3.53279 3.63860 3.73888 3.78410 3.87962 4.07071 4.10612 4.20721 4.35050 4.40282 4.45953 4.47945 4.50582 4.54410 4.68384 4.72624 4.80481 4.96716 4.99644 5.10310 5.11817 5.23125 5.64055 5.73780 5.95382 6.13075 6.21219 6.65875 6.68683 7.49278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.427 5.427 3 C 0.050 3.950 4 C -0.227 4.227 5 C 0.594 3.406 6 O -0.539 6.539 7 N -0.715 5.715 8 C 0.123 3.877 9 H 0.106 0.894 10 C -0.144 4.144 11 C -0.112 4.112 12 H 0.095 0.905 13 C 0.084 3.916 14 O -0.574 6.574 15 C -0.139 4.139 16 C -0.129 4.129 17 C -0.022 4.022 18 C -0.049 4.049 19 O -0.535 6.535 20 Si 0.711 3.289 21 H 0.075 0.925 22 H 0.082 0.918 23 H 0.099 0.901 24 H 0.170 0.830 25 H 0.397 0.603 26 H 0.091 0.909 27 H 0.073 0.927 28 H 0.046 0.954 29 H 0.049 0.951 30 H 0.380 0.620 31 H 0.076 0.924 32 H 0.097 0.903 33 H 0.158 0.842 34 H 0.122 0.878 35 H 0.376 0.624 36 H -0.257 1.257 37 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.664 3.424 0.702 4.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.101 5.101 3 C -0.086 4.086 4 C -0.237 4.237 5 C 0.383 3.617 6 O -0.416 6.416 7 N -0.366 5.366 8 C 0.017 3.983 9 H 0.124 0.876 10 C -0.182 4.182 11 C -0.130 4.130 12 H 0.113 0.887 13 C 0.006 3.994 14 O -0.380 6.380 15 C -0.177 4.177 16 C -0.153 4.153 17 C -0.130 4.130 18 C -0.159 4.159 19 O -0.341 6.341 20 Si 0.610 3.390 21 H 0.093 0.907 22 H 0.101 0.899 23 H 0.118 0.882 24 H 0.187 0.813 25 H 0.231 0.769 26 H 0.110 0.890 27 H 0.092 0.908 28 H 0.064 0.936 29 H 0.067 0.933 30 H 0.227 0.773 31 H 0.095 0.905 32 H 0.116 0.884 33 H 0.176 0.824 34 H 0.140 0.860 35 H 0.224 0.776 36 H -0.181 1.181 37 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -2.560 1.662 0.851 3.168 hybrid contribution -1.194 1.574 0.573 2.057 sum -3.754 3.236 1.424 5.156 Atomic orbital electron populations 1.22256 0.76320 1.05150 1.03811 1.43476 1.06988 1.05011 1.54664 1.21923 0.90148 0.91755 1.04782 1.20297 0.91412 0.93989 1.17996 1.17378 0.88103 0.81125 0.75084 1.90784 1.25787 1.75079 1.49969 1.45495 1.08958 1.05623 1.76509 1.21771 0.89815 0.89729 0.96994 0.87573 1.23481 1.00352 0.96497 0.97911 1.22597 1.00742 0.93483 0.96169 0.88651 1.22206 0.97073 0.95447 0.84684 1.86491 1.76490 1.39239 1.35757 1.23342 1.02867 0.95500 0.96011 1.21631 0.94841 0.93017 1.05861 1.20808 0.90708 0.88997 1.12535 1.24769 0.92870 0.94710 1.03514 1.86575 1.29540 1.88953 1.29006 0.94217 0.85232 0.77443 0.82128 0.90677 0.89929 0.88212 0.81298 0.76889 0.89050 0.90785 0.93566 0.93318 0.77292 0.90521 0.88413 0.82433 0.86027 0.77565 1.18104 1.17820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.20 9.81 59.85 0.59 0.39 16 2 N -0.43 0.19 3.09 -119.90 -0.37 -0.18 16 3 C 0.05 -0.02 10.83 -16.84 -0.18 -0.20 16 4 C -0.23 -0.50 6.29 -103.35 -0.65 -1.15 16 5 C 0.59 2.19 7.81 -12.59 -0.10 2.09 16 6 O -0.54 -4.08 16.57 5.26 0.09 -3.99 16 7 N -0.71 -0.39 5.25 -54.14 -0.28 -0.67 16 8 C 0.12 0.05 4.33 -67.11 -0.29 -0.24 16 9 H 0.11 0.22 7.46 -51.93 -0.39 -0.17 16 10 C -0.14 -0.05 7.43 -25.92 -0.19 -0.24 16 11 C -0.11 0.09 3.89 -89.82 -0.35 -0.26 16 12 H 0.10 -0.04 8.14 -51.93 -0.42 -0.47 16 13 C 0.08 -0.08 6.89 37.16 0.26 0.18 16 14 O -0.57 -0.38 13.66 -35.23 -0.48 -0.86 16 15 C -0.14 0.25 7.39 -25.92 -0.19 0.06 16 16 C -0.13 -0.25 9.50 -37.50 -0.36 -0.61 16 17 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 18 C -0.05 0.04 2.87 36.00 0.10 0.14 16 19 O -0.53 0.33 10.32 -35.23 -0.36 -0.04 16 20 Si 0.71 -0.56 31.12 -169.99 -5.29 -5.85 16 21 H 0.07 -0.29 8.14 -51.93 -0.42 -0.72 16 22 H 0.08 -0.36 8.13 -51.93 -0.42 -0.79 16 23 H 0.10 -0.23 6.73 -51.93 -0.35 -0.58 16 24 H 0.17 -0.64 7.45 -52.48 -0.39 -1.04 16 25 H 0.40 -0.83 7.64 -40.82 -0.31 -1.14 16 26 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 27 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 28 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.05 -0.08 7.84 -51.93 -0.41 -0.49 16 30 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 33 H 0.16 0.15 6.89 -52.48 -0.36 -0.21 16 34 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 35 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 36 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 37 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 LS Contribution 312.00 15.07 4.70 4.70 Total: 0.00 -9.43 312.00 -8.24 -17.67 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -4.37 Total: -10.43 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -1.87 Total: -0.36 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.65 Total: -0.85 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -0.76 Total: -4.89 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.29 Total: -5.85 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -9.43 -8.24 -17.67 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_13287730.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.353 kcal (2) G-P(sol) polarization free energy of solvation -9.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.241 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.675 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds