Wall clock time and date at job start Sat Mar 6 2021 21:29:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38508 * 119.80589 * 119.71996 * 4 2 1 6 6 C 1.37835 * 120.30361 * 179.76223 * 5 4 2 7 7 C 1.39672 * 119.89978 * 0.49245 * 6 5 4 8 8 C 1.47543 * 120.18484 * 179.78787 * 7 6 5 9 9 O 1.21588 * 119.99555 * 179.97438 * 8 7 6 10 10 N 1.34774 * 120.00324 * 359.97438 * 8 7 6 11 11 C 1.46493 * 120.00296 * 179.97438 * 10 8 7 12 12 H 1.09006 * 112.84677 * 23.80939 * 11 10 8 13 13 C 1.53782 * 113.61533 * 155.00281 * 11 10 8 14 14 C 1.53781 * 87.08041 * 89.12220 * 13 11 10 15 15 H 1.09005 * 113.60917 * 270.88694 * 14 13 11 16 16 C 1.52993 * 113.61591 * 139.98277 * 14 13 11 17 17 O 1.42908 * 109.47086 * 174.99854 * 16 14 13 18 18 C 1.53780 * 113.61973 * 252.50399 * 11 10 8 19 19 C 1.40170 * 119.62362 * 359.76748 * 7 6 5 20 20 O 1.35649 * 120.15330 * 179.97438 * 19 7 6 21 21 C 1.38094 * 119.80584 * 300.00258 * 4 2 1 22 22 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 23 23 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 24 24 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 25 25 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 26 26 H 1.08003 * 119.84949 * 0.02847 * 5 4 2 27 27 H 1.07993 * 120.04857 * 180.26038 * 6 5 4 28 28 H 0.97002 * 119.99940 * 0.02562 * 10 8 7 29 29 H 1.09005 * 113.61517 * 203.66314 * 13 11 10 30 30 H 1.08990 * 113.61423 * 334.48549 * 13 11 10 31 31 H 1.08997 * 109.47458 * 294.99596 * 16 14 13 32 32 H 1.09003 * 109.47413 * 55.00234 * 16 14 13 33 33 H 0.96698 * 113.99756 * 180.02562 * 17 16 14 34 34 H 1.09001 * 113.61352 * 25.42545 * 18 11 10 35 35 H 1.08995 * 113.61816 * 156.33577 * 18 11 10 36 36 H 0.96693 * 114.00117 * 270.02431 * 20 19 7 37 37 H 1.07997 * 119.95650 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7225 -0.0316 -2.1425 6 6 3.1915 -0.6726 -3.2690 7 6 2.8596 -2.0099 -3.4981 8 6 3.3543 -2.7008 -4.7042 9 8 3.0636 -3.8651 -4.9000 10 7 4.1284 -2.0416 -5.5888 11 6 4.6200 -2.7278 -6.7861 12 1 3.9995 -3.5771 -7.0720 13 6 4.9400 -1.7783 -7.9527 14 6 6.3585 -1.6665 -7.3694 15 1 6.4680 -0.8658 -6.6380 16 6 7.4592 -1.6571 -8.4321 17 8 8.7242 -1.4342 -7.8057 18 6 6.1231 -3.0491 -6.7385 19 6 2.0541 -2.6917 -2.5755 20 8 1.7247 -3.9904 -2.7877 21 6 1.5951 -2.0324 -1.4452 22 1 -0.3934 0.4418 -0.7650 23 1 1.7923 -0.5138 0.8899 24 1 1.5616 2.4678 1.2086 25 1 3.5346 1.7703 -0.0322 26 1 2.9767 1.0035 -1.9681 27 1 3.8116 -0.1407 -3.9752 28 1 4.3606 -1.1128 -5.4324 29 1 4.9065 -2.2603 -8.9298 30 1 4.3790 -0.8444 -7.9220 31 1 7.4737 -2.6168 -8.9487 32 1 7.2641 -0.8607 -9.1503 33 1 9.4698 -1.4154 -8.4210 34 1 6.5184 -3.1403 -5.7268 35 1 6.4130 -3.8784 -7.3836 36 1 0.9080 -4.1119 -3.2908 37 1 0.9743 -2.5537 -0.7316 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:40 Heat of formation + Delta-G solvation = -99.830888 kcal Electronic energy + Delta-G solvation = -21634.187506 eV Core-core repulsion = 18151.376937 eV Total energy + Delta-G solvation = -3482.810569 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.119 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.77398 -40.75505 -39.28461 -38.35881 -37.26762 -37.17043 -34.46609 -32.60175 -31.13682 -29.02528 -27.41908 -26.79769 -24.11660 -23.95402 -23.11854 -21.79177 -20.34634 -19.42501 -18.75300 -18.29946 -18.22173 -17.31319 -16.86613 -16.54538 -16.36129 -15.97780 -15.96796 -15.80985 -15.53771 -15.17696 -15.00657 -14.70354 -14.29632 -13.85688 -13.60624 -13.54809 -13.24168 -13.11023 -12.96021 -12.33364 -12.16846 -11.91888 -11.71028 -11.66177 -11.46470 -10.90467 -10.83217 -10.57286 -10.17348 -10.03047 -9.80510 -5.14738 -0.42738 0.08295 1.15184 1.52525 1.75044 1.88327 2.00960 2.56512 3.06542 3.07404 3.33923 3.36099 3.42034 3.56441 3.59242 3.70155 3.79289 3.95596 4.00605 4.18936 4.28700 4.30987 4.42212 4.48746 4.53992 4.60394 4.64659 4.67615 4.75223 4.93845 5.00002 5.02017 5.10587 5.13180 5.17497 5.50585 5.55363 6.43210 6.43460 6.62458 6.70102 7.20944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.074 4.074 3 Si 0.693 3.307 4 C -0.076 4.076 5 C -0.136 4.136 6 C -0.064 4.064 7 C -0.165 4.165 8 C 0.561 3.439 9 O -0.516 6.516 10 N -0.711 5.711 11 C 0.121 3.879 12 H 0.107 0.893 13 C -0.138 4.138 14 C -0.112 4.112 15 H 0.096 0.904 16 C 0.084 3.916 17 O -0.574 6.574 18 C -0.144 4.144 19 C 0.174 3.826 20 O -0.476 6.476 21 C -0.129 4.129 22 H 0.380 0.620 23 H 0.119 0.881 24 H -0.253 1.253 25 H -0.256 1.256 26 H 0.136 0.864 27 H 0.134 0.866 28 H 0.399 0.601 29 H 0.099 0.901 30 H 0.078 0.922 31 H 0.049 0.951 32 H 0.047 0.953 33 H 0.381 0.619 34 H 0.073 0.927 35 H 0.092 0.908 36 H 0.398 0.602 37 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.539 5.556 -4.713 7.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.185 4.185 3 Si 0.594 3.406 4 C -0.077 4.077 5 C -0.154 4.154 6 C -0.083 4.083 7 C -0.168 4.168 8 C 0.349 3.651 9 O -0.391 6.391 10 N -0.364 5.364 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.176 4.176 14 C -0.130 4.130 15 H 0.114 0.886 16 C 0.006 3.994 17 O -0.380 6.380 18 C -0.183 4.183 19 C 0.127 3.873 20 O -0.287 6.287 21 C -0.148 4.148 22 H 0.228 0.772 23 H 0.136 0.864 24 H -0.178 1.178 25 H -0.181 1.181 26 H 0.153 0.847 27 H 0.151 0.849 28 H 0.235 0.765 29 H 0.117 0.883 30 H 0.096 0.904 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.228 0.772 34 H 0.092 0.908 35 H 0.111 0.889 36 H 0.257 0.743 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.063 4.869 -3.038 5.740 hybrid contribution 0.278 -0.103 -0.568 0.640 sum 0.215 4.766 -3.606 5.981 Atomic orbital electron populations 1.86537 1.16708 1.81664 1.49290 1.25188 0.85542 1.10469 0.97286 0.94730 0.81003 0.77428 0.87414 1.20450 0.96512 0.94358 0.96333 1.20951 0.99598 1.00043 0.94776 1.21149 0.97476 0.92664 0.97031 1.20407 1.04791 0.94855 0.96780 1.18041 0.78310 0.86314 0.82444 1.90837 1.57035 1.15730 1.75534 1.45574 1.52345 1.15453 1.22991 1.21816 0.95554 0.96405 0.84703 0.87510 1.23339 0.95343 1.00422 0.98497 1.22609 0.93261 0.98992 0.98167 0.88564 1.22194 0.83491 0.99391 0.94317 1.86492 1.16799 1.95760 1.38916 1.23488 0.95549 0.96978 1.02263 1.18505 0.93403 0.83579 0.91801 1.84762 1.47392 1.19512 1.77080 1.21343 1.01178 0.93949 0.98307 0.77235 0.86403 1.17754 1.18079 0.84673 0.84858 0.76497 0.88287 0.90353 0.93318 0.93466 0.77234 0.90801 0.88925 0.74316 0.84127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.44 12.76 -35.23 -0.45 -0.01 16 2 C -0.07 0.09 2.81 36.01 0.10 0.19 16 3 Si 0.69 -1.53 29.77 -169.99 -5.06 -6.59 16 4 C -0.08 0.06 5.39 -104.58 -0.56 -0.51 16 5 C -0.14 0.25 8.65 -39.63 -0.34 -0.09 16 6 C -0.06 0.10 9.54 -39.19 -0.37 -0.27 16 7 C -0.16 -0.20 5.89 -104.84 -0.62 -0.82 16 8 C 0.56 1.49 7.76 -12.47 -0.10 1.39 16 9 O -0.52 -3.26 14.76 -16.58 -0.24 -3.50 16 10 N -0.71 0.20 5.21 -54.06 -0.28 -0.08 16 11 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 12 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 13 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 14 C -0.11 0.14 3.89 -89.81 -0.35 -0.21 16 15 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 16 C 0.08 -0.11 6.88 37.15 0.26 0.15 16 17 O -0.57 -0.24 13.66 -35.23 -0.48 -0.72 16 18 C -0.14 0.00 7.43 -25.92 -0.19 -0.19 16 19 C 0.17 0.34 6.72 -38.70 -0.26 0.08 16 20 O -0.48 -1.41 11.58 -40.52 -0.47 -1.88 16 21 C -0.13 -0.09 9.53 -39.47 -0.38 -0.46 16 22 H 0.38 -1.85 8.70 45.56 0.40 -1.45 16 23 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 24 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 25 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 26 H 0.14 -0.55 4.85 -52.48 -0.25 -0.80 16 27 H 0.13 -0.59 6.40 -52.49 -0.34 -0.93 16 28 H 0.40 -1.14 6.73 -40.82 -0.27 -1.42 16 29 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 31 H 0.05 -0.10 7.84 -51.93 -0.41 -0.50 16 32 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.38 -1.40 9.12 45.56 0.42 -0.98 16 34 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 35 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 36 H 0.40 -0.36 9.06 45.56 0.41 0.05 16 37 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 LS Contribution 312.90 15.07 4.72 4.72 Total: 0.00 -10.28 312.90 -8.56 -18.84 By element: Atomic # 1 Polarization: -6.87 SS G_CDS: -2.99 Total: -9.86 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -3.30 Total: -0.91 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -0.28 Total: -0.08 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -1.64 Total: -6.12 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.06 Total: -6.59 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -10.28 -8.56 -18.84 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.988 kcal (2) G-P(sol) polarization free energy of solvation -10.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.843 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds