Wall clock time and date at job start Sat Mar 6 2021 21:30:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86307 * 109.46875 * 2 1 4 4 C 1.50694 * 109.47242 * 119.99893 * 2 1 3 5 5 C 1.38265 * 119.94257 * 64.99906 * 4 2 1 6 6 C 1.38142 * 120.05885 * 179.97438 * 5 4 2 7 7 C 1.38732 * 119.94228 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05863 * 180.02562 * 7 6 5 9 9 C 1.42893 * 117.00189 * 179.97438 * 8 7 6 10 10 C 1.53003 * 109.47204 * 179.97438 * 9 8 7 11 11 C 1.50703 * 109.47033 * 180.02562 * 10 9 8 12 12 O 1.21273 * 120.00105 * 0.02562 * 11 10 9 13 13 N 1.34771 * 119.99781 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00200 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.84897 * 336.19758 * 14 13 11 16 16 C 1.53958 * 113.61319 * 107.46827 * 14 13 11 17 17 C 1.53778 * 87.01936 * 89.20349 * 16 14 13 18 18 H 1.08994 * 113.61313 * 270.76811 * 17 16 14 19 19 C 1.52999 * 113.61347 * 139.95135 * 17 16 14 20 20 O 1.42903 * 109.47256 * 85.86489 * 19 17 16 21 21 C 1.53780 * 87.17445 * 25.36311 * 17 16 14 22 22 C 1.38732 * 119.88744 * 0.27493 * 7 6 5 23 23 C 1.38148 * 119.94324 * 359.46942 * 22 7 6 24 24 H 0.96702 * 114.00087 * 299.99961 * 1 2 3 25 25 H 1.08998 * 109.46852 * 240.00434 * 2 1 3 26 26 H 1.48502 * 109.99600 * 178.68105 * 3 2 1 27 27 H 1.48499 * 110.00177 * 300.00003 * 3 2 1 28 28 H 1.07999 * 119.97343 * 359.97438 * 5 4 2 29 29 H 1.07994 * 120.03400 * 179.97438 * 6 5 4 30 30 H 1.09011 * 109.46929 * 60.00009 * 9 8 7 31 31 H 1.09003 * 109.47582 * 300.00352 * 9 8 7 32 32 H 1.09002 * 109.46728 * 60.00513 * 10 9 8 33 33 H 1.09001 * 109.47075 * 300.00344 * 10 9 8 34 34 H 0.97002 * 120.00257 * 0.02562 * 13 11 10 35 35 H 1.08994 * 113.66644 * 334.67227 * 16 14 13 36 36 H 1.09008 * 113.61128 * 203.72097 * 16 14 13 37 37 H 1.08997 * 109.47286 * 325.86049 * 19 17 16 38 38 H 1.09008 * 109.47201 * 205.85829 * 19 17 16 39 39 H 0.96700 * 114.00311 * 180.02562 * 20 19 17 40 40 H 1.08994 * 113.61801 * 89.16142 * 21 17 16 41 41 H 1.08998 * 113.61290 * 219.97828 * 21 17 16 42 42 H 1.08006 * 120.02658 * 179.72536 * 22 7 6 43 43 H 1.08002 * 119.97254 * 180.23471 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6840 -2.0604 1.3972 6 6 2.1439 -2.7141 2.5239 7 6 2.8540 -2.0147 3.4889 8 8 3.3079 -2.6555 4.5980 9 6 4.0319 -1.8725 5.5491 10 6 4.4581 -2.7591 6.7210 11 6 5.2211 -1.9331 7.7243 12 8 5.4054 -0.7516 7.5222 13 7 5.6986 -2.5074 8.8461 14 6 6.4409 -1.7046 9.8212 15 1 6.8944 -0.8167 9.3808 16 6 5.6532 -1.4202 11.1131 17 6 6.2421 -2.7292 11.6649 18 1 5.6354 -3.6076 11.4454 19 6 6.6535 -2.6439 13.1361 20 8 5.5227 -2.9232 13.9640 21 6 7.4106 -2.5272 10.6859 22 6 3.0954 -0.6587 3.3222 23 6 2.6380 -0.0108 2.1911 24 1 -0.3933 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5346 1.7703 0.0321 27 1 1.5614 2.4680 -1.2085 28 1 1.1308 -2.6045 0.6459 29 1 1.9501 -3.7686 2.6540 30 1 3.3957 -1.0669 5.9160 31 1 4.9163 -1.4488 5.0731 32 1 5.0941 -3.5648 6.3543 33 1 3.5735 -3.1823 7.1969 34 1 5.5515 -3.4525 9.0075 35 1 4.5717 -1.4493 10.9815 36 1 5.9923 -0.5308 11.6443 37 1 7.0235 -1.6417 13.3524 38 1 7.4392 -3.3724 13.3366 39 1 5.7104 -2.8864 14.9119 40 1 8.2310 -1.9411 11.1000 41 1 7.7467 -3.4490 10.2110 42 1 3.6442 -0.1110 4.0742 43 1 2.8290 1.0440 2.0590 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:12 Heat of formation + Delta-G solvation = -105.052886 kcal Electronic energy + Delta-G solvation = -24166.776458 eV Core-core repulsion = 20372.664208 eV Total energy + Delta-G solvation = -3794.112250 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.55032 -41.14519 -39.78570 -39.04194 -37.35260 -37.12006 -34.48440 -33.27602 -31.99394 -31.38112 -28.98897 -26.85639 -26.58599 -25.62873 -23.82914 -23.22143 -22.20894 -21.63555 -20.38919 -19.51689 -18.35682 -18.32718 -17.81566 -17.50317 -17.23137 -16.90732 -16.44516 -16.27255 -16.08784 -15.83714 -15.72128 -15.56421 -15.02481 -14.64551 -14.61033 -14.39800 -14.20034 -14.08698 -13.63135 -13.56669 -13.48214 -13.17597 -12.88770 -12.84064 -12.07132 -12.00505 -11.96613 -11.78503 -11.74215 -11.65435 -11.52475 -11.04066 -10.92529 -10.37269 -10.17121 -9.98764 -9.15133 -5.00108 0.34511 0.36616 1.34198 1.47247 1.64194 1.67066 2.00948 2.41833 2.71910 3.02697 3.32877 3.47354 3.52387 3.53004 3.67722 3.73218 3.81555 3.84749 3.86334 3.96800 3.99288 4.24556 4.26253 4.31729 4.38818 4.40218 4.45170 4.54094 4.56113 4.57211 4.60025 4.62864 4.71762 4.76454 4.95464 4.96679 5.00406 5.06642 5.22931 5.33736 5.46727 5.54791 5.75909 6.30103 6.38860 6.59649 6.62257 7.05678 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.159 4.159 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.524 3.476 12 O -0.536 6.536 13 N -0.711 5.711 14 C 0.118 3.882 15 H 0.106 0.894 16 C -0.143 4.143 17 C -0.112 4.112 18 H 0.097 0.903 19 C 0.084 3.916 20 O -0.574 6.574 21 C -0.138 4.138 22 C -0.203 4.203 23 C -0.074 4.074 24 H 0.379 0.621 25 H 0.112 0.888 26 H -0.258 1.258 27 H -0.255 1.255 28 H 0.133 0.867 29 H 0.133 0.867 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.108 0.892 33 H 0.108 0.892 34 H 0.404 0.596 35 H 0.074 0.926 36 H 0.092 0.908 37 H 0.048 0.952 38 H 0.047 0.953 39 H 0.381 0.619 40 H 0.098 0.902 41 H 0.078 0.922 42 H 0.135 0.865 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.027 -1.603 5.152 5.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.159 4.159 5 C -0.071 4.071 6 C -0.169 4.169 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.310 3.690 12 O -0.412 6.412 13 N -0.363 5.363 14 C 0.013 3.987 15 H 0.124 0.876 16 C -0.181 4.181 17 C -0.130 4.130 18 H 0.115 0.885 19 C 0.006 3.994 20 O -0.380 6.380 21 C -0.176 4.176 22 C -0.221 4.221 23 C -0.092 4.092 24 H 0.226 0.774 25 H 0.129 0.871 26 H -0.183 1.183 27 H -0.180 1.180 28 H 0.151 0.849 29 H 0.151 0.849 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.126 0.874 33 H 0.126 0.874 34 H 0.239 0.761 35 H 0.092 0.908 36 H 0.111 0.889 37 H 0.067 0.933 38 H 0.065 0.935 39 H 0.228 0.772 40 H 0.117 0.883 41 H 0.097 0.903 42 H 0.152 0.848 43 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 2.438 -0.716 3.492 4.319 hybrid contribution 0.494 -0.918 0.681 1.245 sum 2.932 -1.635 4.173 5.356 Atomic orbital electron populations 1.86498 1.17224 1.81708 1.49247 1.24955 0.85128 1.09835 0.97401 0.94803 0.81123 0.78331 0.87230 1.20229 1.02704 0.95215 0.97797 1.20830 0.96543 0.93475 0.96277 1.20504 1.01764 1.00830 0.93831 1.18989 0.94112 0.90936 0.86745 1.85974 1.69071 1.38531 1.29416 1.22428 0.96415 0.93307 0.88028 1.21471 1.02256 0.99608 0.94819 1.20296 0.78863 0.88019 0.81819 1.90751 1.57731 1.16034 1.76720 1.45624 1.56672 1.13259 1.20719 1.21885 0.93042 0.95419 0.88385 0.87553 1.23498 1.01066 0.97665 0.95909 1.22610 0.98053 0.99461 0.92925 0.88501 1.22191 0.87969 0.99121 0.90135 1.86487 1.36395 1.94075 1.21020 1.23330 0.96902 1.01102 0.96300 1.21276 1.06340 0.93891 1.00629 1.20783 0.96393 0.98997 0.93013 0.77402 0.87060 1.18317 1.17981 0.84948 0.84869 0.90773 0.90874 0.87401 0.87351 0.76135 0.90767 0.88942 0.93334 0.93473 0.77191 0.88308 0.90327 0.84759 0.85374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.83 -35.23 -0.45 -0.92 16 2 C -0.06 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.68 -0.19 29.80 -169.99 -5.07 -5.26 16 4 C -0.16 -0.16 5.35 -104.61 -0.56 -0.72 16 5 C -0.05 -0.07 9.68 -39.61 -0.38 -0.45 16 6 C -0.15 -0.23 9.99 -39.43 -0.39 -0.63 16 7 C 0.14 0.27 6.69 -39.22 -0.26 0.01 16 8 O -0.32 -0.51 10.14 -19.43 -0.20 -0.70 16 9 C 0.07 0.01 4.03 37.16 0.15 0.16 16 10 C -0.14 0.27 6.07 -27.88 -0.17 0.10 16 11 C 0.52 0.12 7.83 -10.99 -0.09 0.03 16 12 O -0.54 -2.23 15.58 5.56 0.09 -2.14 16 13 N -0.71 1.25 5.26 -52.93 -0.28 0.97 16 14 C 0.12 -0.14 4.33 -67.02 -0.29 -0.43 16 15 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 16 C -0.14 0.13 7.44 -25.83 -0.19 -0.07 16 17 C -0.11 0.20 3.88 -89.81 -0.35 -0.15 16 18 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 19 C 0.08 -0.14 6.87 37.16 0.26 0.12 16 20 O -0.57 -0.05 13.66 -35.23 -0.48 -0.53 16 21 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 22 C -0.20 -0.25 9.04 -39.43 -0.36 -0.61 16 23 C -0.07 -0.05 8.66 -39.61 -0.34 -0.39 16 24 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 25 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 26 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 27 H -0.25 -0.74 7.11 56.52 0.40 -0.33 16 28 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 29 H 0.13 0.05 8.06 -52.49 -0.42 -0.38 16 30 H 0.07 0.03 7.61 -51.92 -0.39 -0.37 16 31 H 0.07 0.04 7.63 -51.93 -0.40 -0.36 16 32 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 33 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.40 -1.69 8.70 -40.82 -0.36 -2.04 16 35 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.09 -0.11 7.92 -51.92 -0.41 -0.52 16 37 H 0.05 -0.12 7.87 -51.93 -0.41 -0.52 16 38 H 0.05 -0.12 8.14 -51.92 -0.42 -0.54 16 39 H 0.38 -1.51 9.12 45.56 0.42 -1.09 16 40 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 41 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.13 0.02 6.30 -52.48 -0.33 -0.31 16 43 H 0.13 -0.17 4.90 -52.49 -0.26 -0.43 16 LS Contribution 358.78 15.07 5.41 5.41 Total: 0.00 -9.10 358.78 -9.60 -18.70 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -5.54 Total: -12.78 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -3.07 Total: -2.73 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.28 Total: 0.97 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -1.04 Total: -4.30 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.07 Total: -5.26 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.10 -9.60 -18.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.357 kcal (2) G-P(sol) polarization free energy of solvation -9.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.458 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.053 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds