Wall clock time and date at job start Sat Mar 6 2021 21:30:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35996 * 117.00236 * 2 1 4 4 C 1.39154 * 120.07807 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.06791 * 359.97438 * 4 3 2 6 6 C 1.42902 * 116.99423 * 180.02562 * 5 4 3 7 7 C 1.50700 * 109.46902 * 180.02562 * 6 5 4 8 8 O 1.21285 * 119.99818 * 359.97438 * 7 6 5 9 9 N 1.34772 * 120.00050 * 179.97438 * 7 6 5 10 10 C 1.46505 * 120.00217 * 179.97438 * 9 7 6 11 11 H 1.08998 * 112.84578 * 334.66560 * 10 9 7 12 12 C 1.53779 * 113.61426 * 105.86131 * 10 9 7 13 13 C 1.54054 * 86.98143 * 89.16483 * 12 10 9 14 14 H 1.09000 * 113.69110 * 270.86731 * 13 12 10 15 15 C 1.53000 * 113.61687 * 139.97884 * 13 12 10 16 16 O 1.42906 * 109.47500 * 87.50370 * 15 13 12 17 17 C 1.53777 * 87.07915 * 25.43244 * 13 12 10 18 18 C 1.38563 * 119.85258 * 180.02562 * 4 3 2 19 19 C 1.38236 * 120.00420 * 0.02562 * 18 4 3 20 20 C 1.38261 * 120.14487 * 0.02562 * 19 18 4 21 21 C 1.50699 * 119.92587 * 179.97438 * 20 19 18 22 22 O 1.42892 * 109.47249 * 120.00208 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 359.97438 * 21 20 19 24 24 C 1.38237 * 120.14345 * 0.23650 * 20 19 18 25 25 H 1.08989 * 109.47415 * 299.99766 * 1 2 3 26 26 H 1.09004 * 109.46955 * 60.00281 * 1 2 3 27 27 H 1.09004 * 109.47126 * 179.97438 * 1 2 3 28 28 H 1.08997 * 109.47139 * 299.99564 * 6 5 4 29 29 H 1.08993 * 109.47702 * 59.99587 * 6 5 4 30 30 H 0.97001 * 120.00287 * 0.02562 * 9 7 6 31 31 H 1.09001 * 113.61249 * 203.66427 * 12 10 9 32 32 H 1.08991 * 113.61387 * 334.57109 * 12 10 9 33 33 H 1.08997 * 109.47360 * 207.50028 * 15 13 12 34 34 H 1.08999 * 109.47518 * 327.50369 * 15 13 12 35 35 H 0.96697 * 114.00252 * 180.02562 * 16 15 13 36 36 H 1.09007 * 113.61028 * 220.02494 * 17 13 12 37 37 H 1.08998 * 113.69486 * 89.13306 * 17 13 12 38 38 H 1.08000 * 119.99665 * 179.97438 * 18 4 3 39 39 H 1.07997 * 119.93023 * 180.02562 * 19 18 4 40 40 H 1.09004 * 109.46453 * 240.00276 * 21 20 19 41 41 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 42 42 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 43 43 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 44 44 H 1.08001 * 119.99652 * 179.74952 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2864 0.0005 5 8 4.1795 0.1477 0.0016 6 6 5.6003 0.3008 0.0027 7 6 6.2519 -1.0581 0.0031 8 8 5.5670 -2.0590 0.0030 9 7 7.5957 -1.1611 0.0036 10 6 8.2292 -2.4821 0.0046 11 1 7.5934 -3.2560 0.4346 12 6 8.8432 -2.8718 -1.3504 13 6 10.1382 -2.1916 -0.8671 14 1 10.1903 -1.1293 -1.1058 15 6 11.4097 -2.9501 -1.2528 16 8 11.8381 -2.5330 -2.5508 17 6 9.6607 -2.4784 0.5662 18 6 4.0602 2.5234 0.0011 19 6 3.3029 3.6799 0.0016 20 6 1.9223 3.6057 0.0021 21 6 1.1015 4.8696 0.0033 22 8 0.2766 4.9030 -1.1630 23 14 2.2364 6.3470 0.0046 24 6 1.2932 2.3748 0.0071 25 1 -0.3634 0.5137 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 5.9072 0.8501 -0.8873 29 1 5.9059 0.8509 0.8925 30 1 8.1435 -0.3606 0.0040 31 1 8.9419 -3.9481 -1.4916 32 1 8.3774 -2.3733 -2.2003 33 1 12.1938 -2.7382 -0.5260 34 1 11.2048 -4.0206 -1.2645 35 1 12.6408 -2.9742 -2.8607 36 1 9.8545 -1.6623 1.2625 37 1 9.9820 -3.4469 0.9494 38 1 5.1385 2.5841 0.0019 39 1 3.7907 4.6434 0.0016 40 1 0.4731 4.8938 0.8937 41 1 0.7701 4.8840 -1.9944 42 1 3.1209 6.3090 -1.1878 43 1 1.4391 7.5999 0.0063 44 1 0.2146 2.3197 0.0116 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:56 Heat of formation + Delta-G solvation = -125.155004 kcal Electronic energy + Delta-G solvation = -27005.330964 eV Core-core repulsion = 22891.664829 eV Total energy + Delta-G solvation = -4113.666135 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.81648 -41.28393 -39.94615 -39.02291 -38.81482 -37.31270 -36.97756 -34.43731 -32.04547 -31.45559 -29.99934 -28.59597 -28.28076 -26.82650 -26.20759 -23.97307 -23.30195 -22.56207 -21.85607 -20.39639 -19.76888 -18.59869 -18.40325 -18.26934 -17.92356 -17.52939 -17.22716 -16.93797 -16.60657 -16.26718 -16.14234 -15.89871 -15.79227 -15.77756 -15.38415 -15.29670 -14.81479 -14.54648 -14.26599 -13.75205 -13.69516 -13.61023 -13.50564 -13.40401 -13.11010 -12.61371 -12.54344 -12.18415 -12.14531 -11.99553 -11.93980 -11.72626 -11.65753 -11.50191 -10.92504 -10.86073 -10.63604 -10.14559 -9.77558 -8.84938 -4.98366 0.18038 0.30368 1.26120 1.42588 1.50147 1.57765 1.94346 2.32726 2.52357 2.57288 3.04802 3.33158 3.34141 3.46071 3.54243 3.62471 3.71376 3.77279 3.79961 3.93184 3.94762 3.98638 4.12967 4.26474 4.27394 4.30031 4.35081 4.40801 4.47176 4.53087 4.57767 4.58545 4.63003 4.66027 4.73291 4.98401 4.98707 5.00642 5.07839 5.10729 5.37129 5.48203 5.56371 5.97201 6.33119 6.38015 6.55521 6.61173 7.11649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.518 3.482 8 O -0.507 6.507 9 N -0.711 5.711 10 C 0.121 3.879 11 H 0.107 0.893 12 C -0.144 4.144 13 C -0.112 4.112 14 H 0.097 0.903 15 C 0.083 3.917 16 O -0.574 6.574 17 C -0.137 4.137 18 C -0.170 4.170 19 C -0.113 4.113 20 C -0.114 4.114 21 C -0.073 4.073 22 O -0.530 6.530 23 Si 0.686 3.314 24 C -0.146 4.146 25 H 0.056 0.944 26 H 0.056 0.944 27 H 0.103 0.897 28 H 0.094 0.906 29 H 0.096 0.904 30 H 0.403 0.597 31 H 0.093 0.907 32 H 0.074 0.926 33 H 0.047 0.953 34 H 0.049 0.951 35 H 0.381 0.619 36 H 0.079 0.921 37 H 0.099 0.901 38 H 0.139 0.861 39 H 0.133 0.867 40 H 0.118 0.882 41 H 0.376 0.624 42 H -0.259 1.259 43 H -0.257 1.257 44 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.644 2.055 2.463 6.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.303 3.697 8 O -0.380 6.380 9 N -0.365 5.365 10 C 0.016 3.984 11 H 0.125 0.875 12 C -0.182 4.182 13 C -0.130 4.130 14 H 0.115 0.885 15 C 0.006 3.994 16 O -0.380 6.380 17 C -0.175 4.175 18 C -0.188 4.188 19 C -0.131 4.131 20 C -0.114 4.114 21 C -0.182 4.182 22 O -0.337 6.337 23 Si 0.587 3.413 24 C -0.165 4.165 25 H 0.075 0.925 26 H 0.075 0.925 27 H 0.121 0.879 28 H 0.112 0.888 29 H 0.114 0.886 30 H 0.237 0.763 31 H 0.111 0.889 32 H 0.093 0.907 33 H 0.065 0.935 34 H 0.067 0.933 35 H 0.228 0.772 36 H 0.097 0.903 37 H 0.118 0.882 38 H 0.157 0.843 39 H 0.150 0.850 40 H 0.136 0.864 41 H 0.224 0.776 42 H -0.184 1.184 43 H -0.183 1.183 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.368 2.027 2.548 5.448 hybrid contribution 0.461 -0.082 -1.147 1.239 sum 4.830 1.945 1.401 5.392 Atomic orbital electron populations 1.23129 0.78119 1.04403 1.01364 1.86250 1.21331 1.25333 1.88537 1.18286 0.89017 0.85574 1.01041 1.18283 0.88306 0.85765 1.01760 1.86280 1.16023 1.27755 1.88843 1.22468 0.81304 0.96179 1.04045 1.20022 0.82347 0.90601 0.76731 1.90800 1.62551 1.38014 1.46612 1.45470 1.05819 1.08973 1.76240 1.21831 0.93698 0.85368 0.97510 0.87536 1.23534 0.95571 1.01513 0.97611 1.22664 0.93559 1.00851 0.95942 0.88471 1.22196 0.95539 0.97297 0.84397 1.86487 1.48377 1.68992 1.34145 1.23328 0.94436 1.03671 0.96075 1.20989 1.00473 0.90667 1.06706 1.20684 0.92844 0.97884 1.01653 1.19985 0.93706 0.95094 1.02653 1.25008 1.00219 1.01809 0.91195 1.86592 1.35603 1.95714 1.15757 0.95001 0.80378 0.76371 0.89534 1.20936 1.00402 0.90388 1.04782 0.92506 0.92538 0.87874 0.88780 0.88636 0.76277 0.88874 0.90743 0.93456 0.93311 0.77205 0.90280 0.88215 0.84289 0.85001 0.86379 0.77594 1.18424 1.18257 0.84163 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.36 10.28 -34.23 -0.35 -1.71 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.13 9.45 -47.35 -0.45 -1.58 16 6 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 7 C 0.52 1.01 7.91 -10.99 -0.09 0.93 16 8 O -0.51 -3.65 16.12 -14.36 -0.23 -3.89 16 9 N -0.71 0.89 5.26 -53.02 -0.28 0.62 16 10 C 0.12 -0.08 4.29 -67.12 -0.29 -0.37 16 11 H 0.11 0.12 7.50 -51.93 -0.39 -0.27 16 12 C -0.14 0.07 7.45 -25.78 -0.19 -0.13 16 13 C -0.11 0.19 3.90 -89.67 -0.35 -0.16 16 14 H 0.10 -0.14 8.14 -51.93 -0.42 -0.57 16 15 C 0.08 -0.13 6.89 37.16 0.26 0.13 16 16 O -0.57 -0.11 13.66 -35.23 -0.48 -0.59 16 17 C -0.14 0.38 7.38 -25.92 -0.19 0.19 16 18 C -0.17 0.03 9.04 -39.46 -0.36 -0.32 16 19 C -0.11 0.06 8.66 -39.57 -0.34 -0.28 16 20 C -0.11 -0.05 5.39 -104.61 -0.56 -0.61 16 21 C -0.07 0.02 2.82 36.01 0.10 0.13 16 22 O -0.53 -0.60 12.77 -35.23 -0.45 -1.05 16 23 Si 0.69 -0.88 29.78 -169.99 -5.06 -5.94 16 24 C -0.15 -0.23 8.60 -39.46 -0.34 -0.57 16 25 H 0.06 -0.04 7.65 -51.94 -0.40 -0.44 16 26 H 0.06 -0.03 7.68 -51.93 -0.40 -0.42 16 27 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.09 -0.29 7.66 -51.93 -0.40 -0.69 16 29 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 30 H 0.40 -1.77 8.70 -40.82 -0.36 -2.13 16 31 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 32 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.05 -0.11 7.85 -51.93 -0.41 -0.51 16 35 H 0.38 -1.47 9.12 45.56 0.42 -1.06 16 36 H 0.08 -0.28 8.14 -51.92 -0.42 -0.71 16 37 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 38 H 0.14 -0.46 6.30 -52.49 -0.33 -0.79 16 39 H 0.13 -0.36 4.87 -52.49 -0.26 -0.61 16 40 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 41 H 0.38 -0.59 8.70 45.56 0.40 -0.19 16 42 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 43 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 44 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 366.97 15.07 5.53 5.53 Total: 0.00 -11.92 366.97 -8.88 -20.80 By element: Atomic # 1 Polarization: -7.02 SS G_CDS: -5.40 Total: -12.43 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -1.70 Total: 0.24 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.28 Total: 0.62 kcal Atomic # 8 Polarization: -6.85 SS G_CDS: -1.96 Total: -8.82 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.06 Total: -5.94 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -11.92 -8.88 -20.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.355 kcal (2) G-P(sol) polarization free energy of solvation -11.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.800 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds