Wall clock time and date at job start Sat Mar 6 2021 21:31:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.46985 * 2 1 4 4 C 1.50694 * 109.47336 * 120.00386 * 2 1 3 5 5 C 1.34239 * 126.49833 * 255.35630 * 4 2 1 6 6 N 1.36828 * 109.94074 * 180.13686 * 5 4 2 7 7 C 1.46499 * 125.06723 * 179.81576 * 6 5 4 8 8 C 1.50705 * 109.47104 * 264.69407 * 7 6 5 9 9 O 1.21283 * 119.99691 * 359.97438 * 8 7 6 10 10 N 1.34768 * 120.00217 * 179.97438 * 8 7 6 11 11 C 1.46498 * 120.00221 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.84923 * 336.19839 * 11 10 8 13 13 C 1.53789 * 113.61404 * 107.50091 * 11 10 8 14 14 C 1.53787 * 87.07916 * 89.11935 * 13 11 10 15 15 H 1.09003 * 113.68991 * 270.87343 * 14 13 11 16 16 C 1.52997 * 113.61418 * 139.98375 * 14 13 11 17 17 O 1.42898 * 109.47319 * 87.50225 * 16 14 13 18 18 C 1.53780 * 87.08169 * 25.42984 * 14 13 11 19 19 C 1.37701 * 109.87321 * 359.54519 * 6 5 4 20 20 C 1.39080 * 133.51600 * 180.28615 * 19 6 5 21 21 C 1.37790 * 119.77689 * 179.97438 * 20 19 6 22 22 C 1.38788 * 120.66667 * 359.97315 * 21 20 19 23 23 C 1.36654 * 120.52996 * 0.02562 * 22 21 20 24 24 C 1.39593 * 119.76388 * 0.03950 * 23 22 21 25 25 H 0.96703 * 114.00119 * 299.99753 * 1 2 3 26 26 H 1.09001 * 109.46607 * 240.00376 * 2 1 3 27 27 H 1.48500 * 109.99878 * 178.68742 * 3 2 1 28 28 H 1.48499 * 109.99965 * 299.99933 * 3 2 1 29 29 H 1.08001 * 125.02803 * 359.96342 * 5 4 2 30 30 H 1.09001 * 109.47385 * 144.69197 * 7 6 5 31 31 H 1.08999 * 109.47162 * 24.68749 * 7 6 5 32 32 H 0.97002 * 120.00057 * 359.97438 * 10 8 7 33 33 H 1.08998 * 113.61490 * 334.57116 * 13 11 10 34 34 H 1.08992 * 113.61318 * 203.66712 * 13 11 10 35 35 H 1.09002 * 109.47153 * 327.49917 * 16 14 13 36 36 H 1.09001 * 109.46832 * 207.50108 * 16 14 13 37 37 H 0.96701 * 113.99881 * 180.02562 * 17 16 14 38 38 H 1.09004 * 113.61169 * 89.11732 * 18 14 13 39 39 H 1.09003 * 113.61760 * 220.01517 * 18 14 13 40 40 H 1.08000 * 120.11119 * 359.95446 * 20 19 6 41 41 H 1.08003 * 119.66690 * 180.02562 * 21 20 19 42 42 H 1.07999 * 119.73397 * 180.02562 * 22 21 20 43 43 H 1.08002 * 120.12124 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.4547 -0.1373 2.3256 6 7 2.8018 -1.0989 3.2349 7 6 3.4058 -0.8403 4.5443 8 6 4.9042 -0.9624 4.4393 9 8 5.4170 -1.2388 3.3755 10 7 5.6744 -0.7646 5.5274 11 6 7.1309 -0.8839 5.4255 12 1 7.4469 -1.5117 4.5924 13 6 7.8660 0.4651 5.4960 14 6 7.9039 0.2754 7.0216 15 1 7.0321 0.6808 7.5352 16 6 9.2247 0.7091 7.6605 17 8 9.1678 2.1023 7.9733 18 6 7.8148 -1.2368 6.7569 19 6 2.4933 -2.3457 2.7385 20 6 2.6279 -3.6361 3.2396 21 6 2.2142 -4.7107 2.4827 22 6 1.6630 -4.5192 1.2234 23 6 1.5214 -3.2600 0.7118 24 6 1.9351 -2.1571 1.4608 25 1 -0.3933 0.4417 0.7651 26 1 1.7922 -0.5138 -0.8900 27 1 3.5346 1.7703 0.0320 28 1 1.5614 2.4679 -1.2085 29 1 2.5853 0.9255 2.4668 30 1 3.0319 -1.5659 5.2667 31 1 3.1455 0.1661 4.8722 32 1 5.2643 -0.5432 6.3782 33 1 7.2576 1.3111 5.1762 34 1 8.8509 0.4505 5.0296 35 1 10.0427 0.5263 6.9636 36 1 9.3912 0.1382 8.5740 37 1 9.9736 2.4469 8.3819 38 1 8.7860 -1.7167 6.6351 39 1 7.1652 -1.7648 7.4550 40 1 3.0555 -3.7954 4.2184 41 1 2.3191 -5.7120 2.8737 42 1 1.3434 -5.3722 0.6433 43 1 1.0920 -3.1187 -0.2691 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270474_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:31:21 Heat of formation + Delta-G solvation = -18.038837 kcal Electronic energy + Delta-G solvation = -26190.836527 eV Core-core repulsion = 22397.301490 eV Total energy + Delta-G solvation = -3793.535037 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.48521 -41.33491 -39.65444 -37.98293 -37.55807 -37.30072 -34.58998 -33.89798 -31.38584 -30.11243 -29.48252 -28.40890 -26.89203 -25.75638 -23.89093 -23.45789 -22.67863 -21.87413 -20.59222 -20.42286 -18.71528 -18.45277 -18.33036 -17.67445 -17.26934 -16.98068 -16.36453 -16.31440 -16.20422 -15.95180 -15.78321 -15.42437 -15.28689 -14.79929 -14.72623 -14.56915 -14.35009 -13.92920 -13.80814 -13.66359 -13.53984 -13.34759 -13.12293 -12.58013 -12.45404 -12.10434 -12.01288 -11.98909 -11.78664 -11.66603 -11.56274 -11.11978 -10.95976 -10.41391 -10.23023 -10.20989 -9.01619 -8.51993 -5.00875 0.28569 0.79925 1.36792 1.38775 1.44061 1.67713 1.79638 2.08301 2.08892 2.99364 3.12100 3.28453 3.44236 3.45825 3.50398 3.65576 3.69531 3.77037 3.81897 3.86772 3.92613 4.07983 4.21707 4.31986 4.35617 4.37675 4.41929 4.52562 4.56578 4.59271 4.66223 4.72198 4.80615 4.90479 4.90945 4.92275 4.99468 5.01032 5.26144 5.41343 5.65255 5.81545 5.87030 5.90755 6.15143 6.31731 6.37396 6.56691 6.77053 6.99537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.028 4.028 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.512 6.512 10 N -0.711 5.711 11 C 0.119 3.881 12 H 0.105 0.895 13 C -0.143 4.143 14 C -0.111 4.111 15 H 0.097 0.903 16 C 0.083 3.917 17 O -0.574 6.574 18 C -0.138 4.138 19 C 0.109 3.891 20 C -0.128 4.128 21 C -0.097 4.097 22 C -0.146 4.146 23 C -0.066 4.066 24 C -0.087 4.087 25 H 0.376 0.624 26 H 0.111 0.889 27 H -0.256 1.256 28 H -0.254 1.254 29 H 0.171 0.829 30 H 0.119 0.881 31 H 0.125 0.875 32 H 0.403 0.597 33 H 0.073 0.927 34 H 0.092 0.908 35 H 0.048 0.952 36 H 0.047 0.953 37 H 0.381 0.619 38 H 0.098 0.902 39 H 0.078 0.922 40 H 0.115 0.885 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.063 1.587 8.122 8.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.583 3.417 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.385 6.385 10 N -0.364 5.364 11 C 0.014 3.986 12 H 0.123 0.877 13 C -0.181 4.181 14 C -0.129 4.129 15 H 0.115 0.885 16 C 0.006 3.994 17 O -0.380 6.380 18 C -0.176 4.176 19 C 0.004 3.996 20 C -0.148 4.148 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.084 4.084 24 C -0.091 4.091 25 H 0.223 0.777 26 H 0.128 0.872 27 H -0.181 1.181 28 H -0.179 1.179 29 H 0.188 0.812 30 H 0.136 0.864 31 H 0.142 0.858 32 H 0.237 0.763 33 H 0.092 0.908 34 H 0.110 0.890 35 H 0.067 0.933 36 H 0.066 0.934 37 H 0.228 0.772 38 H 0.117 0.883 39 H 0.097 0.903 40 H 0.133 0.867 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.546 1.688 6.370 6.769 hybrid contribution 0.738 -0.453 0.714 1.122 sum 2.284 1.235 7.084 7.545 Atomic orbital electron populations 1.86502 1.17517 1.81765 1.48909 1.24324 0.84614 1.08736 0.96298 0.95412 0.81029 0.77551 0.87695 1.20631 1.10158 0.92366 0.97344 1.21511 1.00918 0.93841 0.89304 1.43196 1.52500 1.04663 1.14600 1.21583 0.90565 1.05987 0.85271 1.21047 0.89544 0.77292 0.84414 1.90820 1.74582 1.45454 1.27691 1.45615 1.06453 1.72193 1.12125 1.21840 0.79298 0.98219 0.99277 0.87682 1.23475 1.01403 0.97782 0.95474 1.22607 0.98331 0.95723 0.96261 0.88460 1.22192 0.96822 0.82096 0.98338 1.86481 1.43181 1.24243 1.84077 1.23336 1.01870 0.95733 0.96639 1.18164 1.01211 0.85855 0.94332 1.19953 1.04996 0.89259 1.00633 1.20823 0.98375 0.97931 0.94483 1.20667 1.02457 0.96928 0.96424 1.20308 0.97991 0.90959 0.99178 1.18948 1.03373 0.92831 0.93931 0.77721 0.87176 1.18061 1.17891 0.81198 0.86356 0.85758 0.76260 0.90810 0.88963 0.93339 0.93436 0.77159 0.88308 0.90313 0.86745 0.85730 0.85937 0.85974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.96 12.88 -35.23 -0.45 -1.42 16 2 C -0.03 -0.05 3.06 36.00 0.11 0.06 16 3 Si 0.68 0.06 30.76 -169.99 -5.23 -5.17 16 4 C -0.20 -0.52 5.57 -102.71 -0.57 -1.10 16 5 C 0.07 0.06 9.89 -16.73 -0.17 -0.10 16 6 N -0.47 -0.62 2.27 -115.71 -0.26 -0.88 16 7 C 0.09 -0.23 6.48 -5.19 -0.03 -0.26 16 8 C 0.49 0.15 7.90 -10.99 -0.09 0.06 16 9 O -0.51 -2.89 16.02 5.55 0.09 -2.80 16 10 N -0.71 1.65 5.26 -53.02 -0.28 1.37 16 11 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 12 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 13 C -0.14 0.15 7.43 -25.91 -0.19 -0.05 16 14 C -0.11 0.24 3.89 -89.81 -0.35 -0.11 16 15 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 16 C 0.08 -0.15 6.88 37.16 0.26 0.10 16 17 O -0.57 0.13 13.66 -35.23 -0.48 -0.35 16 18 C -0.14 0.43 7.39 -25.92 -0.19 0.23 16 19 C 0.11 0.40 6.80 -83.98 -0.57 -0.18 16 20 C -0.13 -0.35 10.00 -39.43 -0.39 -0.75 16 21 C -0.10 -0.24 10.01 -39.54 -0.40 -0.63 16 22 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 23 C -0.07 -0.27 10.05 -39.65 -0.40 -0.67 16 24 C -0.09 -0.39 6.35 -105.14 -0.67 -1.06 16 25 H 0.38 -0.88 8.70 45.56 0.40 -0.49 16 26 H 0.11 0.30 7.96 -51.93 -0.41 -0.11 16 27 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 28 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 29 H 0.17 -0.46 6.35 -52.49 -0.33 -0.79 16 30 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 31 H 0.12 -0.73 8.12 -51.93 -0.42 -1.15 16 32 H 0.40 -2.14 8.70 -40.82 -0.36 -2.49 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 35 H 0.05 -0.12 7.84 -51.93 -0.41 -0.53 16 36 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.38 -1.60 9.12 45.56 0.42 -1.19 16 38 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 39 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 40 H 0.11 0.09 8.06 -52.49 -0.42 -0.34 16 41 H 0.12 0.03 8.06 -52.48 -0.42 -0.40 16 42 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 43 H 0.12 0.39 8.06 -52.49 -0.42 -0.04 16 LS Contribution 364.26 15.07 5.49 5.49 Total: 0.00 -12.15 364.26 -10.81 -22.96 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -5.34 Total: -13.50 kcal Atomic # 6 Polarization: -1.36 SS G_CDS: -4.34 Total: -5.70 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.54 Total: 0.49 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.85 Total: -4.57 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.23 Total: -5.17 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -12.15 -10.81 -22.96 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270474_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.924 kcal (2) G-P(sol) polarization free energy of solvation -12.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.230 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.809 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.962 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.039 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds