Wall clock time and date at job start Sat Mar 6 2021 21:31:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.35537 * 125.67814 * 2 1 4 4 C 1.35457 * 108.87164 * 179.97438 * 3 2 1 5 5 C 1.50701 * 126.06905 * 180.02562 * 4 3 2 6 6 O 1.42896 * 109.47106 * 244.97896 * 5 4 3 7 7 Si 1.86300 * 109.46765 * 4.97632 * 5 4 3 8 8 C 1.39838 * 107.86372 * 359.74108 * 4 3 2 9 9 C 1.37649 * 125.68072 * 179.97438 * 2 1 3 10 10 C 1.46684 * 126.22985 * 0.02614 * 9 2 1 11 11 O 1.21696 * 119.99986 * 5.33198 * 10 9 2 12 12 N 1.34773 * 119.99971 * 185.33959 * 10 9 2 13 13 C 1.46503 * 120.00005 * 185.30019 * 12 10 9 14 14 H 1.09002 * 112.85256 * 23.79208 * 13 12 10 15 15 C 1.53777 * 113.61588 * 154.99599 * 13 12 10 16 16 C 1.53787 * 87.08100 * 139.97545 * 15 13 12 17 17 C 1.53001 * 113.61324 * 89.19759 * 16 15 13 18 18 O 1.42893 * 109.47297 * 181.53135 * 17 16 15 19 19 C 1.50694 * 113.61383 * 220.01541 * 16 15 13 20 20 C 1.38243 * 119.99885 * 116.83240 * 19 16 15 21 21 C 1.38228 * 120.00297 * 180.27427 * 20 19 16 22 22 C 1.38239 * 119.99471 * 359.46932 * 21 20 19 23 23 C 1.38234 * 120.00291 * 0.55443 * 22 21 20 24 24 C 1.38230 * 119.99794 * 359.69829 * 23 22 21 25 25 C 1.53782 * 113.60770 * 252.49313 * 13 12 10 26 26 H 1.09004 * 109.47114 * 264.00140 * 1 2 3 27 27 H 1.09009 * 109.47021 * 23.99588 * 1 2 3 28 28 H 1.08998 * 109.47192 * 143.99472 * 1 2 3 29 29 H 1.08000 * 125.56506 * 359.94053 * 3 2 1 30 30 H 1.08999 * 109.47138 * 124.97423 * 5 4 3 31 31 H 0.96698 * 114.00526 * 59.99391 * 6 5 4 32 32 H 1.48498 * 110.00061 * 58.68062 * 7 5 4 33 33 H 1.48503 * 109.99974 * 180.02562 * 7 5 4 34 34 H 1.07995 * 126.45968 * 180.30104 * 8 4 3 35 35 H 0.96998 * 120.00188 * 5.29012 * 12 10 9 36 36 H 1.08998 * 113.61704 * 25.42997 * 15 13 12 37 37 H 1.08996 * 113.61662 * 254.52315 * 15 13 12 38 38 H 1.09000 * 109.47368 * 301.53654 * 17 16 15 39 39 H 1.09003 * 109.46945 * 61.52705 * 17 16 15 40 40 H 0.96699 * 114.00111 * 180.02562 * 18 17 16 41 41 H 1.08003 * 119.99579 * 0.02562 * 20 19 16 42 42 H 1.07997 * 120.00257 * 179.72158 * 21 20 19 43 43 H 1.08005 * 120.00100 * 180.27381 * 22 21 20 44 44 H 1.07999 * 119.99673 * 179.72323 * 23 22 21 45 45 H 1.08003 * 120.00265 * 180.02562 * 24 23 22 46 46 H 1.09004 * 113.61462 * 105.46894 * 25 13 12 47 47 H 1.09000 * 113.61802 * 334.56498 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7537 1.6189 0.0013 6 8 5.4780 1.4522 -1.2192 7 14 4.1926 3.3888 0.1537 8 6 3.5780 -0.6888 0.0070 9 6 2.2678 -1.1181 0.0005 10 6 1.8124 -2.5124 0.0006 11 8 0.6260 -2.7650 -0.0977 12 7 2.7078 -3.5138 0.1097 13 6 2.2673 -4.9062 -0.0066 14 1 1.3390 -5.0110 -0.5683 15 6 3.3769 -5.8670 -0.4655 16 6 2.8156 -6.8753 0.5512 17 6 1.7239 -7.7807 -0.0225 18 8 1.2427 -8.6539 1.0011 19 6 3.8807 -7.6407 1.2931 20 6 4.0022 -7.5042 2.6634 21 6 4.9828 -8.2020 3.3433 22 6 5.8349 -9.0447 2.6545 23 6 5.7139 -9.1809 1.2842 24 6 4.7366 -8.4791 0.6036 25 6 2.2699 -5.6667 1.3300 26 1 -0.3633 -0.1074 1.0221 27 1 -0.3633 0.9389 -0.4180 28 1 -0.3633 -0.8313 -0.6041 29 1 1.9082 2.1236 -0.0009 30 1 5.3985 1.3683 0.8437 31 1 4.9648 1.6581 -2.0124 32 1 3.4108 3.5679 1.4034 33 1 5.3683 4.2960 0.1550 34 1 4.4582 -1.3144 0.0136 35 1 3.6438 -3.3126 0.2651 36 1 4.3819 -5.5195 -0.2264 37 1 3.2746 -6.1891 -1.5017 38 1 0.9020 -7.1686 -0.3939 39 1 2.1350 -8.3719 -0.8408 40 1 0.5471 -9.2582 0.7077 41 1 3.3334 -6.8493 3.2022 42 1 5.0805 -8.0919 4.4132 43 1 6.5983 -9.5933 3.1862 44 1 6.3826 -9.8359 0.7455 45 1 4.6417 -8.5857 -0.4670 46 1 1.2740 -5.8270 1.7431 47 1 2.9723 -5.2644 2.0599 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13270510_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:31:33 Heat of formation + Delta-G solvation = -8.264270 kcal Electronic energy + Delta-G solvation = -29602.287446 eV Core-core repulsion = 25525.412507 eV Total energy + Delta-G solvation = -4076.874940 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.57938 -41.75216 -40.07075 -38.90965 -37.66062 -37.17789 -35.04627 -33.77323 -31.98827 -31.81050 -30.70633 -28.43843 -28.07522 -26.96635 -25.76498 -24.99806 -23.84259 -23.18071 -22.18562 -21.19378 -20.66920 -19.63130 -18.77984 -18.45648 -18.02883 -17.73133 -17.10785 -16.77620 -16.61365 -16.18803 -16.04609 -15.90106 -15.70499 -15.48766 -15.30879 -15.24938 -14.94200 -14.48652 -14.30957 -14.27137 -14.07710 -13.80359 -13.53649 -13.45755 -13.32037 -13.25443 -13.16268 -13.06821 -12.46575 -12.29180 -12.24102 -12.07782 -11.93264 -11.54285 -11.35753 -11.16195 -10.82661 -10.29432 -10.18249 -9.79798 -9.71151 -9.57361 -9.26686 -4.94517 0.38225 0.48022 0.52178 1.42382 1.52136 1.58493 1.74128 2.05078 2.24939 2.31965 2.88090 3.03982 3.28238 3.59938 3.66695 3.68941 3.73432 3.83829 3.88341 4.01795 4.04170 4.16167 4.16850 4.25177 4.28858 4.35130 4.39337 4.40047 4.48969 4.53960 4.62429 4.66484 4.68113 4.71662 4.74512 4.77094 4.77297 4.96247 4.97409 5.03764 5.16443 5.17475 5.19712 5.43086 5.60682 5.65030 5.66879 5.71762 5.87686 6.13675 6.16666 6.43238 6.87288 6.91172 7.07974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.412 5.412 3 C 0.036 3.964 4 C -0.221 4.221 5 C -0.037 4.037 6 O -0.560 6.560 7 Si 0.780 3.220 8 C -0.113 4.113 9 C -0.080 4.080 10 C 0.588 3.412 11 O -0.582 6.582 12 N -0.697 5.697 13 C 0.127 3.873 14 H 0.107 0.893 15 C -0.114 4.114 16 C -0.039 4.039 17 C 0.099 3.901 18 O -0.587 6.587 19 C -0.055 4.055 20 C -0.126 4.126 21 C -0.132 4.132 22 C -0.138 4.138 23 C -0.128 4.128 24 C -0.122 4.122 25 C -0.137 4.137 26 H 0.076 0.924 27 H 0.119 0.881 28 H 0.084 0.916 29 H 0.203 0.797 30 H 0.101 0.899 31 H 0.393 0.607 32 H -0.284 1.284 33 H -0.305 1.305 34 H 0.154 0.846 35 H 0.414 0.586 36 H 0.104 0.896 37 H 0.097 0.903 38 H 0.058 0.942 39 H 0.064 0.936 40 H 0.395 0.605 41 H 0.119 0.881 42 H 0.129 0.871 43 H 0.133 0.867 44 H 0.136 0.864 45 H 0.133 0.867 46 H 0.063 0.937 47 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.722 1.295 -3.809 4.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.084 5.084 3 C -0.101 4.101 4 C -0.227 4.227 5 C -0.148 4.148 6 O -0.368 6.368 7 Si 0.687 3.313 8 C -0.139 4.139 9 C -0.192 4.192 10 C 0.377 3.623 11 O -0.464 6.464 12 N -0.347 5.347 13 C 0.023 3.977 14 H 0.125 0.875 15 C -0.152 4.152 16 C -0.039 4.039 17 C 0.021 3.979 18 O -0.395 6.395 19 C -0.055 4.055 20 C -0.144 4.144 21 C -0.150 4.150 22 C -0.155 4.155 23 C -0.146 4.146 24 C -0.140 4.140 25 C -0.176 4.176 26 H 0.094 0.906 27 H 0.137 0.863 28 H 0.103 0.897 29 H 0.220 0.780 30 H 0.118 0.882 31 H 0.243 0.757 32 H -0.211 1.211 33 H -0.233 1.233 34 H 0.172 0.828 35 H 0.252 0.748 36 H 0.122 0.878 37 H 0.116 0.884 38 H 0.077 0.923 39 H 0.083 0.917 40 H 0.245 0.755 41 H 0.137 0.863 42 H 0.147 0.853 43 H 0.150 0.850 44 H 0.154 0.846 45 H 0.151 0.849 46 H 0.081 0.919 47 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -1.044 1.936 -2.679 3.466 hybrid contribution 0.142 -0.909 0.445 1.022 sum -0.902 1.027 -2.234 2.619 Atomic orbital electron populations 1.22404 0.74810 1.06134 1.04307 1.44037 1.07651 1.04811 1.51934 1.22359 0.89704 0.92534 1.05464 1.19901 0.94271 0.94720 1.13795 1.24470 0.92457 1.08373 0.89469 1.86443 1.42134 1.92195 1.16023 0.93993 0.80235 0.72414 0.84690 1.21415 0.94272 0.95291 1.02934 1.20070 0.90934 0.87603 1.20635 1.17229 0.85347 0.84308 0.75405 1.90778 1.17508 1.85388 1.52709 1.45553 1.11623 1.05102 1.72453 1.22516 0.99251 0.78485 0.97481 0.87526 1.23388 0.98834 0.93040 0.99902 1.20542 0.93834 0.92589 0.96978 1.21986 0.94844 0.91603 0.89467 1.86476 1.59918 1.53795 1.39286 1.19478 0.95492 0.97104 0.93428 1.21161 0.98448 1.00406 0.94348 1.21371 0.95843 0.97166 1.00594 1.21411 0.99963 0.99158 0.95018 1.21407 0.98732 0.99716 0.94696 1.21141 0.95555 0.96742 1.00570 1.23538 1.01711 0.94990 0.97360 0.90576 0.86274 0.89738 0.78023 0.88207 0.75727 1.21105 1.23294 0.82792 0.74840 0.87794 0.88401 0.92342 0.91740 0.75533 0.86318 0.85304 0.84953 0.84607 0.84875 0.91854 0.89127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.48 127.77 1.34 1.24 16 2 N -0.41 -0.69 3.16 -534.30 -1.69 -2.38 16 3 C 0.04 -0.07 9.92 83.48 0.83 0.76 16 4 C -0.22 0.00 5.43 -20.12 -0.11 -0.11 16 5 C -0.04 0.03 3.02 71.24 0.22 0.25 16 6 O -0.56 -0.08 12.88 -148.98 -1.92 -2.00 16 7 Si 0.78 -2.67 30.60 68.60 2.10 -0.57 16 8 C -0.11 -0.19 10.28 22.57 0.23 0.04 16 9 C -0.08 -0.33 6.89 40.35 0.28 -0.05 16 10 C 0.59 3.63 7.77 86.45 0.67 4.30 16 11 O -0.58 -7.09 14.43 -4.34 -0.06 -7.15 16 12 N -0.70 -0.33 5.33 -443.99 -2.37 -2.70 16 13 C 0.13 -0.02 3.86 45.52 0.18 0.16 16 14 H 0.11 0.27 7.04 -2.39 -0.02 0.25 16 15 C -0.11 0.45 6.82 31.12 0.21 0.66 16 16 C -0.04 0.02 0.89 -52.40 -0.05 -0.03 16 17 C 0.10 -0.12 6.28 71.98 0.45 0.33 16 18 O -0.59 -1.26 13.17 -148.98 -1.96 -3.22 16 19 C -0.05 -0.16 4.40 -19.87 -0.09 -0.24 16 20 C -0.13 -0.60 9.04 22.27 0.20 -0.40 16 21 C -0.13 -0.55 10.05 22.27 0.22 -0.33 16 22 C -0.14 -0.43 10.05 22.27 0.22 -0.21 16 23 C -0.13 -0.28 10.05 22.27 0.22 -0.06 16 24 C -0.12 -0.23 9.47 22.27 0.21 -0.02 16 25 C -0.14 -0.18 6.07 31.12 0.19 0.00 16 26 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.12 -1.00 8.12 -2.38 -0.02 -1.02 16 28 H 0.08 0.22 6.56 -2.39 -0.02 0.20 16 29 H 0.20 -1.83 6.21 -2.91 -0.02 -1.85 16 30 H 0.10 0.08 7.96 -2.39 -0.02 0.06 16 31 H 0.39 -3.03 8.70 -74.06 -0.64 -3.68 16 32 H -0.28 -0.31 7.11 99.48 0.71 0.39 16 33 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 34 H 0.15 -0.23 7.49 -2.91 -0.02 -0.25 16 35 H 0.41 -1.56 7.67 -92.71 -0.71 -2.27 16 36 H 0.10 -0.52 8.07 -2.39 -0.02 -0.54 16 37 H 0.10 -0.63 8.10 -2.39 -0.02 -0.65 16 38 H 0.06 -0.15 7.34 -2.39 -0.02 -0.16 16 39 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 40 H 0.40 -2.34 9.12 -74.06 -0.68 -3.01 16 41 H 0.12 0.49 6.53 -2.91 -0.02 0.47 16 42 H 0.13 0.16 8.06 -2.91 -0.02 0.13 16 43 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 44 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 45 H 0.13 -0.26 8.06 -2.91 -0.02 -0.29 16 46 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 47 H 0.09 0.13 6.92 -2.39 -0.02 0.11 16 Total: 0.00 -23.59 386.97 -1.44 -25.03 By element: Atomic # 1 Polarization: -12.32 SS G_CDS: -0.97 Total: -13.30 kcal Atomic # 6 Polarization: 0.86 SS G_CDS: 5.43 Total: 6.29 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -4.06 Total: -5.08 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: -3.94 Total: -12.37 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: 2.10 Total: -0.57 kcal Total: -23.59 -1.44 -25.03 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.765 kcal (2) G-P(sol) polarization free energy of solvation -23.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.828 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds