Wall clock time and date at job start Sat Mar 6 2021 21:31:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47167 * 2 1 4 4 C 1.50701 * 109.47256 * 239.99353 * 2 1 3 5 5 C 1.36438 * 120.29803 * 240.07481 * 4 2 1 6 6 C 1.40095 * 119.25369 * 180.02562 * 5 4 2 7 7 C 1.40856 * 132.86247 * 179.97438 * 6 5 4 8 8 C 1.46562 * 126.58490 * 359.92923 * 7 6 5 9 9 O 1.21723 * 119.99852 * 0.02562 * 8 7 6 10 10 N 1.34777 * 120.00189 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99857 * 179.97438 * 10 8 7 12 12 H 1.08999 * 112.85169 * 336.20082 * 11 10 8 13 13 C 1.53783 * 113.68802 * 107.47353 * 11 10 8 14 14 C 1.53786 * 87.08094 * 139.99255 * 13 11 10 15 15 C 1.52990 * 113.69259 * 89.12614 * 14 13 11 16 16 O 1.42905 * 109.47235 * 80.93424 * 15 14 13 17 17 C 1.50702 * 113.60930 * 220.01741 * 14 13 11 18 18 C 1.38232 * 120.00029 * 331.52168 * 17 14 13 19 19 C 1.38242 * 119.99832 * 180.32829 * 18 17 14 20 20 C 1.38238 * 119.99966 * 359.92172 * 19 18 17 21 21 C 1.38230 * 119.99936 * 0.07225 * 20 19 18 22 22 C 1.38236 * 119.99644 * 151.79136 * 17 14 13 23 23 C 1.53783 * 87.08184 * 334.56426 * 14 13 11 24 24 C 1.40556 * 106.83733 * 180.18764 * 7 6 5 25 25 N 1.30744 * 108.74608 * 359.61577 * 24 7 6 26 26 N 1.36567 * 120.23005 * 359.91494 * 6 5 4 27 27 C 1.36242 * 120.08290 * 0.02584 * 26 6 5 28 28 C 1.35187 * 120.70446 * 0.02562 * 27 26 6 29 29 H 0.96697 * 114.00536 * 300.00768 * 1 2 3 30 30 H 1.08995 * 109.46633 * 120.00093 * 2 1 3 31 31 H 1.48504 * 109.99934 * 178.67867 * 3 2 1 32 32 H 1.48502 * 110.00124 * 299.99454 * 3 2 1 33 33 H 1.08002 * 120.37563 * 359.95207 * 5 4 2 34 34 H 0.97003 * 119.99975 * 0.02562 * 10 8 7 35 35 H 1.08996 * 113.61501 * 25.44435 * 13 11 10 36 36 H 1.09003 * 113.61094 * 254.53554 * 13 11 10 37 37 H 1.08999 * 109.47260 * 200.93125 * 15 14 13 38 38 H 1.08993 * 109.47549 * 320.93323 * 15 14 13 39 39 H 0.96696 * 114.00020 * 179.97438 * 16 15 14 40 40 H 1.07996 * 120.00559 * 0.25030 * 18 17 14 41 41 H 1.07994 * 120.00087 * 179.97438 * 19 18 17 42 42 H 1.07995 * 120.00102 * 180.02562 * 20 19 18 43 43 H 1.08001 * 120.00062 * 179.97438 * 21 20 19 44 44 H 1.07998 * 120.00220 * 359.72443 * 22 17 14 45 45 H 1.08993 * 113.61372 * 139.98119 * 23 14 13 46 46 H 1.09000 * 113.61738 * 270.88782 * 23 14 13 47 47 H 1.07999 * 125.63092 * 179.77707 * 24 7 6 48 48 H 1.08004 * 119.64654 * 179.97438 * 27 26 6 49 49 H 1.08004 * 119.83894 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7149 -1.8212 -1.1121 6 6 3.1703 -2.4643 -2.2705 7 6 3.9737 -3.6018 -2.4820 8 6 4.5742 -4.4513 -1.4496 9 8 4.3950 -4.1977 -0.2727 10 7 5.3241 -5.5139 -1.8035 11 6 5.9247 -6.3626 -0.7715 12 1 6.0566 -5.8449 0.1786 13 6 5.2523 -7.7389 -0.6350 14 6 6.6633 -8.3226 -0.4517 15 6 7.1333 -8.3490 1.0040 16 8 6.5738 -9.4860 1.6647 17 6 6.8684 -9.6385 -1.1568 18 6 5.7960 -10.4854 -1.3655 19 6 5.9854 -11.6956 -2.0063 20 6 7.2470 -12.0581 -2.4399 21 6 8.3193 -11.2111 -2.2314 22 6 8.1300 -10.0012 -1.5901 23 6 7.1820 -7.1114 -1.2446 24 6 4.0940 -3.7623 -3.8732 25 7 3.4174 -2.8133 -4.4657 26 7 2.8305 -1.9833 -3.5026 27 6 2.0466 -0.8743 -3.6105 28 6 1.5966 -0.2370 -2.5064 29 1 -0.3934 0.4418 0.7649 30 1 1.7922 -0.5138 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 2.9821 -2.1998 -0.1365 34 1 5.4666 -5.7162 -2.7414 35 1 4.7559 -8.0746 -1.5454 36 1 4.6232 -7.8315 0.2503 37 1 8.2211 -8.4105 1.0336 38 1 6.8070 -7.4392 1.5078 39 1 6.8303 -9.5668 2.5935 40 1 4.8104 -10.2023 -1.0267 41 1 5.1477 -12.3574 -2.1690 42 1 7.3949 -13.0033 -2.9409 43 1 9.3050 -11.4944 -2.5698 44 1 8.9679 -9.3395 -1.4272 45 1 8.1105 -6.6974 -0.8516 46 1 7.2130 -7.2754 -2.3218 47 1 4.6510 -4.5424 -4.3706 48 1 1.7825 -0.4997 -4.5885 49 1 0.9764 0.6413 -2.6081 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270510_11618758.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:31:41 Heat of formation + Delta-G solvation = 50.276407 kcal Electronic energy + Delta-G solvation = -33807.543867 eV Core-core repulsion = 29283.103110 eV Total energy + Delta-G solvation = -4524.440758 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -43.29950 -41.74740 -40.06085 -39.22187 -38.77720 -37.33243 -37.12228 -34.62260 -34.21946 -32.17766 -31.78862 -31.70572 -30.27100 -28.24936 -27.25628 -26.93801 -25.28002 -24.58983 -23.70115 -23.09663 -23.01728 -22.05179 -21.20678 -19.76346 -19.11395 -18.49670 -18.40950 -18.08165 -17.80684 -17.46282 -17.03042 -16.89762 -16.69551 -16.12065 -15.95035 -15.85869 -15.77893 -15.54037 -15.37621 -15.31088 -14.85853 -14.58972 -14.34944 -14.22479 -14.21322 -13.93578 -13.67341 -13.41760 -13.34331 -13.30747 -13.08456 -12.99347 -12.61705 -12.41033 -12.22565 -12.08597 -12.03872 -11.93286 -11.59663 -11.46142 -11.32712 -10.84120 -10.78776 -10.73834 -10.29394 -9.95920 -9.69417 -9.49095 -8.77774 -5.17201 -0.58088 -0.13745 0.56592 0.62727 0.99288 1.05526 1.12626 1.51720 1.84813 2.01227 2.28235 2.56919 2.96056 2.97331 2.98861 3.11717 3.32911 3.40696 3.59766 3.65315 3.67755 3.76331 3.83538 3.87674 3.96819 4.04667 4.14477 4.20486 4.21809 4.23518 4.30970 4.34009 4.43095 4.47872 4.50705 4.55679 4.67822 4.68151 4.71226 4.73484 4.82218 4.99985 5.05218 5.07161 5.11529 5.14803 5.22934 5.24877 5.27217 5.59976 5.63570 5.69041 5.74301 5.81435 6.20921 6.30473 6.44900 6.62216 6.70215 7.39563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.073 4.073 3 Si 0.703 3.297 4 C -0.031 4.031 5 C -0.093 4.093 6 C 0.168 3.832 7 C -0.315 4.315 8 C 0.603 3.397 9 O -0.550 6.550 10 N -0.718 5.718 11 C 0.127 3.873 12 H 0.118 0.882 13 C -0.137 4.137 14 C -0.040 4.040 15 C 0.102 3.898 16 O -0.564 6.564 17 C -0.052 4.052 18 C -0.102 4.102 19 C -0.120 4.120 20 C -0.125 4.125 21 C -0.120 4.120 22 C -0.117 4.117 23 C -0.130 4.130 24 C 0.120 3.880 25 N -0.312 5.312 26 N -0.265 5.265 27 C 0.114 3.886 28 C -0.146 4.146 29 H 0.388 0.612 30 H 0.082 0.918 31 H -0.256 1.256 32 H -0.249 1.249 33 H 0.165 0.835 34 H 0.399 0.601 35 H 0.090 0.910 36 H 0.079 0.921 37 H 0.050 0.950 38 H 0.054 0.946 39 H 0.381 0.619 40 H 0.120 0.880 41 H 0.120 0.880 42 H 0.119 0.881 43 H 0.120 0.880 44 H 0.118 0.882 45 H 0.080 0.920 46 H 0.095 0.905 47 H 0.199 0.801 48 H 0.178 0.822 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.449 3.214 1.958 3.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.182 4.182 3 Si 0.602 3.398 4 C -0.036 4.036 5 C -0.112 4.112 6 C 0.047 3.953 7 C -0.330 4.330 8 C 0.393 3.607 9 O -0.429 6.429 10 N -0.368 5.368 11 C 0.022 3.978 12 H 0.136 0.864 13 C -0.176 4.176 14 C -0.041 4.041 15 C 0.024 3.976 16 O -0.369 6.369 17 C -0.052 4.052 18 C -0.120 4.120 19 C -0.138 4.138 20 C -0.143 4.143 21 C -0.138 4.138 22 C -0.135 4.135 23 C -0.168 4.168 24 C -0.061 4.061 25 N -0.132 5.132 26 N -0.029 5.029 27 C -0.012 4.012 28 C -0.167 4.167 29 H 0.236 0.764 30 H 0.100 0.900 31 H -0.180 1.180 32 H -0.173 1.173 33 H 0.182 0.818 34 H 0.234 0.766 35 H 0.109 0.891 36 H 0.098 0.902 37 H 0.068 0.932 38 H 0.072 0.928 39 H 0.228 0.772 40 H 0.138 0.862 41 H 0.138 0.862 42 H 0.137 0.863 43 H 0.138 0.862 44 H 0.136 0.864 45 H 0.099 0.901 46 H 0.114 0.886 47 H 0.216 0.784 48 H 0.196 0.804 49 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 0.341 4.001 -0.020 4.015 hybrid contribution 0.657 -1.045 0.502 1.333 sum 0.998 2.956 0.482 3.157 Atomic orbital electron populations 1.86475 1.16444 1.81971 1.50034 1.24697 0.86359 1.10567 0.96619 0.95328 0.81344 0.75563 0.87578 1.19440 0.95950 0.93810 0.94405 1.20701 0.98295 0.93912 0.98335 1.19236 0.95776 0.94235 0.86090 1.19620 1.16094 1.03684 0.93623 1.16841 0.77327 0.79308 0.87265 1.90773 1.61388 1.72162 1.18558 1.45646 1.52608 1.28760 1.09771 1.22495 0.92942 0.89342 0.93003 0.86440 1.23566 0.95824 0.94827 1.03364 1.20525 0.97969 0.91894 0.93715 1.21886 0.96574 0.88639 0.90522 1.86512 1.74889 1.47057 1.28437 1.19325 0.93419 0.94899 0.97524 1.20983 0.98802 0.93918 0.98303 1.21165 0.97290 0.96680 0.98651 1.21157 0.93032 0.99686 1.00387 1.21115 0.98903 0.94446 0.99358 1.20927 0.96438 0.96890 0.99211 1.23451 0.98079 0.94174 1.01087 1.24072 0.94340 0.95767 0.91947 1.77643 1.18327 1.06482 1.10750 1.46095 1.32089 1.18933 1.05811 1.21585 0.92385 0.85369 1.01881 1.20845 1.02816 1.02594 0.90449 0.76409 0.89953 1.17997 1.17271 0.81750 0.76629 0.89137 0.90226 0.93151 0.92820 0.77244 0.86177 0.86190 0.86257 0.86208 0.86440 0.90096 0.88616 0.78420 0.80450 0.82058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.66 12.76 -35.23 -0.45 0.21 16 2 C -0.07 0.08 2.81 36.01 0.10 0.19 16 3 Si 0.70 -1.60 31.97 -169.99 -5.43 -7.04 16 4 C -0.03 -0.04 4.53 -104.55 -0.47 -0.52 16 5 C -0.09 -0.28 9.35 -39.53 -0.37 -0.65 16 6 C 0.17 0.68 6.76 -84.07 -0.57 0.11 16 7 C -0.32 -1.04 6.17 -104.68 -0.65 -1.68 16 8 C 0.60 2.11 7.78 -12.90 -0.10 2.01 16 9 O -0.55 -3.57 15.30 5.17 0.08 -3.50 16 10 N -0.72 -0.18 5.35 -54.35 -0.29 -0.47 16 11 C 0.13 0.00 3.89 -67.11 -0.26 -0.26 16 12 H 0.12 0.16 6.96 -51.93 -0.36 -0.21 16 13 C -0.14 -0.05 5.99 -25.92 -0.16 -0.21 16 14 C -0.04 0.00 0.88 -154.85 -0.14 -0.13 16 15 C 0.10 -0.04 6.37 37.15 0.24 0.20 16 16 O -0.56 -0.54 13.17 -35.23 -0.46 -1.00 16 17 C -0.05 -0.07 4.36 -104.62 -0.46 -0.53 16 18 C -0.10 -0.21 9.03 -39.58 -0.36 -0.57 16 19 C -0.12 -0.22 10.05 -39.58 -0.40 -0.62 16 20 C -0.12 -0.19 10.05 -39.58 -0.40 -0.59 16 21 C -0.12 -0.16 10.05 -39.58 -0.40 -0.55 16 22 C -0.12 -0.14 9.39 -39.58 -0.37 -0.51 16 23 C -0.13 0.20 6.63 -25.91 -0.17 0.02 16 24 C 0.12 0.18 11.44 -17.14 -0.20 -0.02 16 25 N -0.31 -1.13 12.58 30.75 0.39 -0.74 16 26 N -0.26 -0.92 3.86 -10.55 -0.04 -0.96 16 27 C 0.11 0.12 11.17 -16.68 -0.19 -0.07 16 28 C -0.15 -0.09 8.67 -39.95 -0.35 -0.43 16 29 H 0.39 -2.40 8.74 45.56 0.40 -2.00 16 30 H 0.08 -0.19 7.71 -51.93 -0.40 -0.59 16 31 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 32 H -0.25 0.00 7.07 56.52 0.40 0.40 16 33 H 0.17 0.48 7.01 -52.49 -0.37 0.11 16 34 H 0.40 -0.94 7.65 -40.82 -0.31 -1.25 16 35 H 0.09 0.03 7.44 -51.93 -0.39 -0.36 16 36 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 37 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.05 -0.06 7.34 -51.93 -0.38 -0.44 16 39 H 0.38 -1.14 9.12 45.56 0.42 -0.72 16 40 H 0.12 0.20 7.02 -52.49 -0.37 -0.17 16 41 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 42 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 43 H 0.12 -0.04 8.06 -52.49 -0.42 -0.47 16 44 H 0.12 -0.04 8.03 -52.49 -0.42 -0.46 16 45 H 0.08 -0.18 8.10 -51.93 -0.42 -0.60 16 46 H 0.10 -0.20 8.07 -51.93 -0.42 -0.62 16 47 H 0.20 -0.57 7.46 -52.49 -0.39 -0.96 16 48 H 0.18 -0.34 8.06 -52.48 -0.42 -0.76 16 49 H 0.16 -0.21 7.52 -52.48 -0.39 -0.60 16 LS Contribution 411.15 15.07 6.20 6.20 Total: 0.00 -12.05 411.15 -11.21 -23.26 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -5.55 Total: -11.16 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -5.65 Total: -4.80 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: 0.06 Total: -2.17 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -0.83 Total: -4.29 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.43 Total: -7.04 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -12.05 -11.21 -23.26 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_11618758.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.540 kcal (2) G-P(sol) polarization free energy of solvation -12.049 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.263 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds