Wall clock time and date at job start Sat Mar 6 2021 21:31:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47167 * 2 1 4 4 C 1.50701 * 109.47256 * 239.99353 * 2 1 3 5 5 C 1.36438 * 120.29803 * 240.07481 * 4 2 1 6 6 C 1.40095 * 119.25369 * 180.02562 * 5 4 2 7 7 C 1.40856 * 132.86247 * 179.97438 * 6 5 4 8 8 C 1.46562 * 126.58490 * 359.92923 * 7 6 5 9 9 O 1.21723 * 119.99852 * 0.02562 * 8 7 6 10 10 N 1.34777 * 120.00189 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99857 * 179.97438 * 10 8 7 12 12 H 1.08999 * 112.85169 * 336.20082 * 11 10 8 13 13 C 1.53783 * 113.68802 * 107.47353 * 11 10 8 14 14 C 1.53786 * 87.08094 * 139.99255 * 13 11 10 15 15 C 1.52990 * 113.69259 * 89.12614 * 14 13 11 16 16 O 1.42905 * 109.47235 * 80.93424 * 15 14 13 17 17 C 1.50702 * 113.60930 * 220.01741 * 14 13 11 18 18 C 1.38232 * 120.00029 * 331.52168 * 17 14 13 19 19 C 1.38242 * 119.99832 * 180.32829 * 18 17 14 20 20 C 1.38238 * 119.99966 * 359.92172 * 19 18 17 21 21 C 1.38230 * 119.99936 * 0.07225 * 20 19 18 22 22 C 1.38236 * 119.99644 * 151.79136 * 17 14 13 23 23 C 1.53783 * 87.08184 * 334.56426 * 14 13 11 24 24 C 1.40556 * 106.83733 * 180.18764 * 7 6 5 25 25 N 1.30744 * 108.74608 * 359.61577 * 24 7 6 26 26 N 1.36567 * 120.23005 * 359.91494 * 6 5 4 27 27 C 1.36242 * 120.08290 * 0.02584 * 26 6 5 28 28 C 1.35187 * 120.70446 * 0.02562 * 27 26 6 29 29 H 0.96697 * 114.00536 * 300.00768 * 1 2 3 30 30 H 1.08995 * 109.46633 * 120.00093 * 2 1 3 31 31 H 1.48504 * 109.99934 * 178.67867 * 3 2 1 32 32 H 1.48502 * 110.00124 * 299.99454 * 3 2 1 33 33 H 1.08002 * 120.37563 * 359.95207 * 5 4 2 34 34 H 0.97003 * 119.99975 * 0.02562 * 10 8 7 35 35 H 1.08996 * 113.61501 * 25.44435 * 13 11 10 36 36 H 1.09003 * 113.61094 * 254.53554 * 13 11 10 37 37 H 1.08999 * 109.47260 * 200.93125 * 15 14 13 38 38 H 1.08993 * 109.47549 * 320.93323 * 15 14 13 39 39 H 0.96696 * 114.00020 * 179.97438 * 16 15 14 40 40 H 1.07996 * 120.00559 * 0.25030 * 18 17 14 41 41 H 1.07994 * 120.00087 * 179.97438 * 19 18 17 42 42 H 1.07995 * 120.00102 * 180.02562 * 20 19 18 43 43 H 1.08001 * 120.00062 * 179.97438 * 21 20 19 44 44 H 1.07998 * 120.00220 * 359.72443 * 22 17 14 45 45 H 1.08993 * 113.61372 * 139.98119 * 23 14 13 46 46 H 1.09000 * 113.61738 * 270.88782 * 23 14 13 47 47 H 1.07999 * 125.63092 * 179.77707 * 24 7 6 48 48 H 1.08004 * 119.64654 * 179.97438 * 27 26 6 49 49 H 1.08004 * 119.83894 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7149 -1.8212 -1.1121 6 6 3.1703 -2.4643 -2.2705 7 6 3.9737 -3.6018 -2.4820 8 6 4.5742 -4.4513 -1.4496 9 8 4.3950 -4.1977 -0.2727 10 7 5.3241 -5.5139 -1.8035 11 6 5.9247 -6.3626 -0.7715 12 1 6.0566 -5.8449 0.1786 13 6 5.2523 -7.7389 -0.6350 14 6 6.6633 -8.3226 -0.4517 15 6 7.1333 -8.3490 1.0040 16 8 6.5738 -9.4860 1.6647 17 6 6.8684 -9.6385 -1.1568 18 6 5.7960 -10.4854 -1.3655 19 6 5.9854 -11.6956 -2.0063 20 6 7.2470 -12.0581 -2.4399 21 6 8.3193 -11.2111 -2.2314 22 6 8.1300 -10.0012 -1.5901 23 6 7.1820 -7.1114 -1.2446 24 6 4.0940 -3.7623 -3.8732 25 7 3.4174 -2.8133 -4.4657 26 7 2.8305 -1.9833 -3.5026 27 6 2.0466 -0.8743 -3.6105 28 6 1.5966 -0.2370 -2.5064 29 1 -0.3934 0.4418 0.7649 30 1 1.7922 -0.5138 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 2.9821 -2.1998 -0.1365 34 1 5.4666 -5.7162 -2.7414 35 1 4.7559 -8.0746 -1.5454 36 1 4.6232 -7.8315 0.2503 37 1 8.2211 -8.4105 1.0336 38 1 6.8070 -7.4392 1.5078 39 1 6.8303 -9.5668 2.5935 40 1 4.8104 -10.2023 -1.0267 41 1 5.1477 -12.3574 -2.1690 42 1 7.3949 -13.0033 -2.9409 43 1 9.3050 -11.4944 -2.5698 44 1 8.9679 -9.3395 -1.4272 45 1 8.1105 -6.6974 -0.8516 46 1 7.2130 -7.2754 -2.3218 47 1 4.6510 -4.5424 -4.3706 48 1 1.7825 -0.4997 -4.5885 49 1 0.9764 0.6413 -2.6081 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13270510_11618758.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:31:39 Heat of formation + Delta-G solvation = 47.415533 kcal Electronic energy + Delta-G solvation = -33807.667924 eV Core-core repulsion = 29283.103110 eV Total energy + Delta-G solvation = -4524.564815 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -43.42685 -41.78510 -40.22403 -39.25533 -38.86431 -37.28724 -37.15326 -34.77736 -34.31068 -32.28661 -31.85749 -31.76901 -30.36164 -28.26349 -27.29191 -26.92197 -25.36971 -24.63240 -23.81421 -23.15737 -23.08703 -22.11729 -21.36833 -19.79805 -19.18199 -18.48906 -18.37946 -18.11437 -17.85291 -17.53772 -17.12107 -17.04751 -16.72136 -16.14240 -16.02339 -15.95233 -15.84652 -15.52319 -15.46634 -15.39854 -14.94888 -14.59549 -14.37561 -14.28013 -14.24902 -13.96237 -13.71849 -13.43319 -13.42195 -13.32372 -13.13209 -13.05508 -12.59763 -12.44983 -12.28329 -12.14660 -12.07938 -11.99079 -11.73743 -11.48917 -11.33269 -11.02278 -10.85784 -10.80638 -10.24730 -10.08741 -9.77499 -9.55631 -8.91701 -5.02131 -0.69865 -0.25762 0.49805 0.54374 0.89813 0.92971 1.21773 1.63377 1.90055 1.96241 2.18873 2.38049 2.90377 2.94584 3.05685 3.09186 3.32857 3.40001 3.59031 3.66930 3.69032 3.74307 3.79216 3.88607 3.89671 4.05179 4.12162 4.18597 4.19044 4.25312 4.30802 4.31440 4.45139 4.46912 4.51912 4.55985 4.63942 4.67856 4.72384 4.76797 4.80006 4.98393 4.99825 5.01190 5.03878 5.09062 5.16572 5.19173 5.22110 5.51790 5.54061 5.63024 5.66985 5.74544 6.15622 6.17573 6.55262 6.85112 6.88239 7.23227 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.083 4.083 3 Si 0.804 3.196 4 C -0.032 4.032 5 C -0.120 4.120 6 C 0.148 3.852 7 C -0.337 4.337 8 C 0.601 3.399 9 O -0.589 6.589 10 N -0.703 5.703 11 C 0.126 3.874 12 H 0.103 0.897 13 C -0.136 4.136 14 C -0.039 4.039 15 C 0.099 3.901 16 O -0.586 6.586 17 C -0.055 4.055 18 C -0.119 4.119 19 C -0.133 4.133 20 C -0.137 4.137 21 C -0.128 4.128 22 C -0.123 4.123 23 C -0.114 4.114 24 C 0.132 3.868 25 N -0.337 5.337 26 N -0.275 5.275 27 C 0.109 3.891 28 C -0.151 4.151 29 H 0.409 0.591 30 H 0.092 0.908 31 H -0.305 1.305 32 H -0.273 1.273 33 H 0.155 0.845 34 H 0.413 0.587 35 H 0.090 0.910 36 H 0.061 0.939 37 H 0.063 0.937 38 H 0.057 0.943 39 H 0.395 0.605 40 H 0.116 0.884 41 H 0.128 0.872 42 H 0.132 0.868 43 H 0.136 0.864 44 H 0.134 0.866 45 H 0.095 0.905 46 H 0.107 0.893 47 H 0.238 0.762 48 H 0.206 0.794 49 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.879 3.756 1.285 4.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.191 4.191 3 Si 0.706 3.294 4 C -0.038 4.038 5 C -0.139 4.139 6 C 0.027 3.973 7 C -0.352 4.352 8 C 0.391 3.609 9 O -0.471 6.471 10 N -0.353 5.353 11 C 0.021 3.979 12 H 0.121 0.879 13 C -0.175 4.175 14 C -0.040 4.040 15 C 0.021 3.979 16 O -0.394 6.394 17 C -0.055 4.055 18 C -0.137 4.137 19 C -0.151 4.151 20 C -0.155 4.155 21 C -0.146 4.146 22 C -0.141 4.141 23 C -0.152 4.152 24 C -0.049 4.049 25 N -0.158 5.158 26 N -0.039 5.039 27 C -0.016 4.016 28 C -0.172 4.172 29 H 0.261 0.739 30 H 0.110 0.890 31 H -0.233 1.233 32 H -0.199 1.199 33 H 0.173 0.827 34 H 0.251 0.749 35 H 0.109 0.891 36 H 0.079 0.921 37 H 0.081 0.919 38 H 0.075 0.925 39 H 0.244 0.756 40 H 0.134 0.866 41 H 0.146 0.854 42 H 0.150 0.850 43 H 0.154 0.846 44 H 0.152 0.848 45 H 0.113 0.887 46 H 0.125 0.875 47 H 0.253 0.747 48 H 0.222 0.778 49 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 0.753 4.514 -0.688 4.627 hybrid contribution 0.485 -1.187 0.746 1.484 sum 1.237 3.326 0.059 3.550 Atomic orbital electron populations 1.86424 1.16025 1.82618 1.51680 1.24901 0.86819 1.11541 0.95875 0.94238 0.76987 0.72763 0.85364 1.19870 0.94803 0.93074 0.96014 1.20703 1.00141 0.95216 0.97862 1.19563 0.96192 0.94843 0.86721 1.19744 1.16969 1.04053 0.94424 1.16985 0.77373 0.79816 0.86773 1.90743 1.63007 1.73339 1.20040 1.45528 1.51429 1.27634 1.10695 1.22464 0.93948 0.88857 0.92627 0.87884 1.23525 0.96122 0.95263 1.02552 1.20538 0.97506 0.91789 0.94122 1.21979 0.97220 0.88443 0.90258 1.86473 1.75448 1.47636 1.29836 1.19474 0.93437 0.95240 0.97372 1.21094 0.99048 0.94520 0.99066 1.21366 0.97971 0.96877 0.98846 1.21397 0.93019 1.00439 1.00607 1.21401 0.99601 0.94466 0.99126 1.21161 0.96754 0.97214 0.98947 1.23397 0.97640 0.92565 1.01588 1.24653 0.93345 0.95700 0.91178 1.77574 1.19413 1.07345 1.11444 1.46304 1.32532 1.19517 1.05526 1.22185 0.91447 0.84607 1.03382 1.21165 1.02878 1.03155 0.90006 0.73882 0.88995 1.23254 1.19894 0.82704 0.74946 0.89112 0.92052 0.91904 0.92453 0.75583 0.86637 0.85407 0.84998 0.84620 0.84780 0.88658 0.87459 0.74650 0.77753 0.79987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.73 12.76 -148.98 -1.90 -0.17 16 2 C -0.08 0.18 2.81 71.24 0.20 0.38 16 3 Si 0.80 -3.87 31.97 68.60 2.19 -1.67 16 4 C -0.03 -0.12 4.53 -19.82 -0.09 -0.21 16 5 C -0.12 -0.99 9.35 22.30 0.21 -0.78 16 6 C 0.15 1.48 6.76 39.50 0.27 1.75 16 7 C -0.34 -2.70 6.17 -19.90 -0.12 -2.83 16 8 C 0.60 5.22 7.78 86.41 0.67 5.89 16 9 O -0.59 -9.25 15.30 -4.42 -0.07 -9.32 16 10 N -0.70 -0.74 5.35 -444.07 -2.38 -3.11 16 11 C 0.13 0.09 3.89 45.52 0.18 0.27 16 12 H 0.10 0.43 6.96 -2.39 -0.02 0.41 16 13 C -0.14 -0.26 5.99 31.12 0.19 -0.07 16 14 C -0.04 0.00 0.88 -52.40 -0.05 -0.04 16 15 C 0.10 -0.05 6.37 71.98 0.46 0.41 16 16 O -0.59 -1.50 13.17 -148.98 -1.96 -3.46 16 17 C -0.06 -0.16 4.36 -19.87 -0.09 -0.24 16 18 C -0.12 -0.60 9.03 22.27 0.20 -0.40 16 19 C -0.13 -0.56 10.05 22.27 0.22 -0.34 16 20 C -0.14 -0.41 10.05 22.27 0.22 -0.18 16 21 C -0.13 -0.25 10.05 22.27 0.22 -0.02 16 22 C -0.12 -0.19 9.39 22.27 0.21 0.02 16 23 C -0.11 0.43 6.63 31.12 0.21 0.64 16 24 C 0.13 0.42 11.44 85.42 0.98 1.40 16 25 N -0.34 -2.58 12.58 -56.62 -0.71 -3.29 16 26 N -0.27 -2.17 3.86 -187.28 -0.72 -2.89 16 27 C 0.11 0.25 11.17 83.30 0.93 1.18 16 28 C -0.15 -0.21 8.67 22.03 0.19 -0.02 16 29 H 0.41 -5.57 8.74 -74.06 -0.65 -6.22 16 30 H 0.09 -0.39 7.71 -2.39 -0.02 -0.41 16 31 H -0.30 -1.05 7.11 99.48 0.71 -0.34 16 32 H -0.27 0.21 7.07 99.48 0.70 0.91 16 33 H 0.16 1.42 7.01 -2.91 -0.02 1.40 16 34 H 0.41 -2.13 7.65 -92.71 -0.71 -2.84 16 35 H 0.09 0.15 7.44 -2.39 -0.02 0.13 16 36 H 0.06 0.34 8.10 -2.39 -0.02 0.32 16 37 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.06 -0.09 7.34 -2.39 -0.02 -0.10 16 39 H 0.39 -2.13 9.12 -74.06 -0.68 -2.80 16 40 H 0.12 0.58 7.02 -2.91 -0.02 0.56 16 41 H 0.13 0.19 8.06 -2.91 -0.02 0.16 16 42 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 43 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 44 H 0.13 -0.31 8.03 -2.91 -0.02 -0.34 16 45 H 0.09 -0.57 8.10 -2.39 -0.02 -0.59 16 46 H 0.11 -0.61 8.07 -2.39 -0.02 -0.63 16 47 H 0.24 -1.64 7.46 -2.91 -0.02 -1.66 16 48 H 0.21 -0.92 8.06 -2.91 -0.02 -0.94 16 49 H 0.18 -0.62 7.52 -2.91 -0.02 -0.65 16 Total: 0.00 -30.03 411.15 -1.31 -31.34 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -0.97 Total: -14.21 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: 5.21 Total: 6.79 kcal Atomic # 7 Polarization: -5.49 SS G_CDS: -3.81 Total: -9.29 kcal Atomic # 8 Polarization: -9.02 SS G_CDS: -3.93 Total: -12.95 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: 2.19 Total: -1.67 kcal Total: -30.03 -1.31 -31.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_11618758.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.754 kcal (2) G-P(sol) polarization free energy of solvation -30.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.339 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds