Wall clock time and date at job start Sat Mar 6 2021 21:33:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.38978 * 119.95393 * 2 1 4 4 O 1.35709 * 119.91382 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.17298 * 180.02562 * 3 2 1 6 6 C 1.50701 * 119.95294 * 180.02562 * 5 3 2 7 7 O 1.42904 * 109.47044 * 74.97820 * 6 5 3 8 8 Si 1.86295 * 109.47138 * 194.97157 * 6 5 3 9 9 C 1.37676 * 120.09110 * 359.97438 * 5 3 2 10 10 C 1.39753 * 119.90789 * 0.02562 * 9 5 3 11 11 C 1.47608 * 120.08579 * 179.97438 * 10 9 5 12 12 O 1.21586 * 119.99786 * 0.02562 * 11 10 9 13 13 N 1.34775 * 120.00199 * 180.02562 * 11 10 9 14 14 C 1.46494 * 120.00296 * 180.02562 * 13 11 10 15 15 H 1.09006 * 112.85058 * 336.19416 * 14 13 11 16 16 C 1.53784 * 113.61712 * 107.50212 * 14 13 11 17 17 C 1.53779 * 87.08310 * 139.98431 * 16 14 13 18 18 C 1.52994 * 113.61568 * 89.11873 * 17 16 14 19 19 O 1.42893 * 109.47525 * 82.50136 * 18 17 16 20 20 C 1.50702 * 113.61370 * 220.02271 * 17 16 14 21 21 C 1.38238 * 119.99707 * 331.52436 * 20 17 16 22 22 C 1.38238 * 119.99774 * 179.74918 * 21 20 17 23 23 C 1.38233 * 119.99572 * 0.54480 * 22 21 20 24 24 C 1.38231 * 120.00468 * 359.70408 * 23 22 21 25 25 C 1.38231 * 120.00071 * 151.79615 * 20 17 16 26 26 C 1.53777 * 113.61666 * 204.99705 * 14 13 11 27 27 C 1.37721 * 119.95338 * 180.29701 * 2 1 3 28 28 H 1.08997 * 109.46577 * 89.99854 * 1 2 3 29 29 H 1.08998 * 109.47025 * 210.00128 * 1 2 3 30 30 H 1.09003 * 109.46662 * 330.00635 * 1 2 3 31 31 H 0.96702 * 114.00059 * 270.02590 * 4 3 2 32 32 H 1.09002 * 109.47374 * 314.97772 * 6 5 3 33 33 H 0.96710 * 113.99695 * 299.99217 * 7 6 5 34 34 H 1.48509 * 109.99473 * 60.00293 * 8 6 5 35 35 H 1.48501 * 109.99962 * 181.31744 * 8 6 5 36 36 H 1.07992 * 120.04676 * 180.02562 * 9 5 3 37 37 H 0.97001 * 119.99859 * 359.97438 * 13 11 10 38 38 H 1.09001 * 113.61403 * 25.43277 * 16 14 13 39 39 H 1.09003 * 113.61161 * 254.53492 * 16 14 13 40 40 H 1.09003 * 109.46800 * 202.50563 * 18 17 16 41 41 H 1.09005 * 109.47162 * 322.49607 * 18 17 16 42 42 H 0.96701 * 114.00585 * 179.97438 * 19 18 17 43 43 H 1.08007 * 120.00098 * 359.97438 * 21 20 17 44 44 H 1.07999 * 120.00002 * 180.27568 * 22 21 20 45 45 H 1.08011 * 119.99643 * 179.72753 * 23 22 21 46 46 H 1.08002 * 119.99966 * 179.97438 * 24 23 22 47 47 H 1.07999 * 120.00098 * 0.02562 * 25 20 17 48 48 H 1.09012 * 113.61226 * 105.46803 * 26 14 13 49 49 H 1.08996 * 113.69492 * 334.58180 * 26 14 13 50 50 H 1.07993 * 120.04995 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5912 1.2095 -0.0005 6 6 4.3386 2.5181 0.0000 7 8 4.2721 3.1040 1.3017 8 14 6.1198 2.2160 -0.4546 9 6 4.2860 0.0209 -0.0005 10 6 3.5918 -1.1921 -0.0005 11 6 4.3328 -2.4687 -0.0011 12 8 5.5487 -2.4658 -0.0011 13 7 3.6617 -3.6374 -0.0016 14 6 4.3970 -4.9044 -0.0016 15 1 5.4046 -4.8091 -0.4067 16 6 4.3393 -5.6503 1.3420 17 6 4.1915 -6.9459 0.5269 18 6 5.5275 -7.5966 0.1627 19 8 5.9927 -8.3783 1.2647 20 6 3.2055 -7.9210 1.1167 21 6 2.9818 -7.9378 2.4807 22 6 2.0735 -8.8288 3.0212 23 6 1.3973 -9.7106 2.1989 24 6 1.6249 -9.6973 0.8356 25 6 2.5290 -8.8025 0.2944 26 6 3.6021 -6.0781 -0.5976 27 6 2.1947 -1.1932 -0.0062 28 1 -0.3632 0.0000 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8901 0.5138 31 1 1.3223 2.7176 -0.8841 32 1 3.8878 3.1944 -0.7263 33 1 3.3724 3.2892 1.6042 34 1 6.2025 1.6067 -1.8064 35 1 6.8749 3.4944 -0.4266 36 1 5.3659 0.0259 -0.0005 37 1 2.6917 -3.6397 -0.0013 38 1 3.4602 -5.4073 1.9389 39 1 5.2671 -5.5962 1.9116 40 1 5.3933 -8.2390 -0.7076 41 1 6.2585 -6.8214 -0.0672 42 1 6.8370 -8.8215 1.1040 43 1 3.5139 -7.2523 3.1238 44 1 1.8953 -8.8389 4.0864 45 1 0.6909 -10.4097 2.6218 46 1 1.0969 -10.3865 0.1932 47 1 2.7074 -8.7927 -0.7707 48 1 3.9347 -6.3696 -1.5940 49 1 2.5213 -5.9533 -0.5319 50 1 1.6548 -2.1285 -0.0106 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270510_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:33:41 Heat of formation + Delta-G solvation = -80.669569 kcal Electronic energy + Delta-G solvation = -33219.816444 eV Core-core repulsion = 28758.319353 eV Total energy + Delta-G solvation = -4461.497091 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.02827 -41.49751 -40.20409 -38.96887 -37.75422 -37.57906 -37.17145 -34.88819 -34.04433 -32.22698 -31.77574 -31.29425 -28.30969 -28.14789 -27.02823 -26.86395 -25.39029 -24.27952 -23.13532 -22.46643 -22.08691 -21.47700 -19.80493 -19.64024 -18.75485 -18.50089 -18.13278 -17.88439 -17.54408 -16.98418 -16.81329 -16.20970 -16.10519 -16.01126 -15.80450 -15.63628 -15.42290 -15.28334 -15.04750 -14.70688 -14.49331 -14.32808 -14.26040 -14.05058 -13.82481 -13.72016 -13.51632 -13.44884 -13.36886 -13.19893 -13.07094 -12.82399 -12.46774 -12.28978 -12.24603 -12.08936 -11.95183 -11.52068 -11.38868 -11.25702 -11.18285 -10.93179 -10.85449 -10.14568 -10.00695 -9.74250 -9.72980 -9.53182 -4.81668 -0.45674 0.02657 0.52677 0.58961 1.38340 1.60523 1.69973 2.00359 2.02819 2.53950 2.90653 2.92490 2.94352 3.24420 3.35387 3.47611 3.53783 3.61992 3.67732 3.81578 3.85847 3.92339 3.98735 4.04823 4.15614 4.18157 4.21598 4.28376 4.30274 4.37490 4.42025 4.46343 4.48047 4.53899 4.57703 4.60703 4.61698 4.66625 4.77535 4.92272 4.92885 4.97749 5.00369 5.03077 5.08422 5.18241 5.18931 5.20990 5.39965 5.48264 5.65134 5.70720 5.77146 6.17084 6.36475 6.39366 6.56712 6.67096 7.13108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.112 4.112 3 C 0.142 3.858 4 O -0.492 6.492 5 C -0.143 4.143 6 C -0.070 4.070 7 O -0.533 6.533 8 Si 0.738 3.262 9 C -0.040 4.040 10 C -0.135 4.135 11 C 0.562 3.438 12 O -0.529 6.529 13 N -0.715 5.715 14 C 0.123 3.877 15 H 0.120 0.880 16 C -0.137 4.137 17 C -0.040 4.040 18 C 0.101 3.899 19 O -0.563 6.563 20 C -0.052 4.052 21 C -0.102 4.102 22 C -0.120 4.120 23 C -0.124 4.124 24 C -0.120 4.120 25 C -0.116 4.116 26 C -0.130 4.130 27 C -0.069 4.069 28 H 0.073 0.927 29 H 0.071 0.929 30 H 0.077 0.923 31 H 0.396 0.604 32 H 0.072 0.928 33 H 0.369 0.631 34 H -0.249 1.249 35 H -0.251 1.251 36 H 0.147 0.853 37 H 0.401 0.599 38 H 0.091 0.909 39 H 0.081 0.919 40 H 0.051 0.949 41 H 0.054 0.946 42 H 0.381 0.619 43 H 0.120 0.880 44 H 0.120 0.880 45 H 0.120 0.880 46 H 0.120 0.880 47 H 0.117 0.883 48 H 0.081 0.919 49 H 0.095 0.905 50 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.131 -2.162 -2.817 5.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.113 4.113 3 C 0.097 3.903 4 O -0.303 6.303 5 C -0.144 4.144 6 C -0.178 4.178 7 O -0.338 6.338 8 Si 0.636 3.364 9 C -0.058 4.058 10 C -0.138 4.138 11 C 0.350 3.650 12 O -0.406 6.406 13 N -0.366 5.366 14 C 0.018 3.982 15 H 0.138 0.862 16 C -0.176 4.176 17 C -0.040 4.040 18 C 0.023 3.977 19 O -0.369 6.369 20 C -0.052 4.052 21 C -0.120 4.120 22 C -0.138 4.138 23 C -0.142 4.142 24 C -0.138 4.138 25 C -0.134 4.134 26 C -0.168 4.168 27 C -0.088 4.088 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.096 0.904 31 H 0.253 0.747 32 H 0.089 0.911 33 H 0.218 0.782 34 H -0.173 1.173 35 H -0.176 1.176 36 H 0.164 0.836 37 H 0.237 0.763 38 H 0.109 0.891 39 H 0.100 0.900 40 H 0.069 0.931 41 H 0.072 0.928 42 H 0.228 0.772 43 H 0.138 0.862 44 H 0.138 0.862 45 H 0.138 0.862 46 H 0.138 0.862 47 H 0.135 0.865 48 H 0.100 0.900 49 H 0.114 0.886 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.493 -1.857 -2.562 4.028 hybrid contribution -1.777 0.346 -1.054 2.095 sum -4.270 -1.511 -3.616 5.796 Atomic orbital electron populations 1.20743 0.89680 1.03907 1.02809 1.20172 0.97275 0.92034 1.01816 1.18329 0.88767 0.85289 0.97939 1.84709 1.75860 1.35885 1.33880 1.20640 0.93492 0.96494 1.03756 1.25313 1.12931 0.90941 0.88662 1.86751 1.33003 1.82717 1.31348 0.92532 0.75548 0.84899 0.83420 1.20934 1.00174 0.90016 0.94713 1.19868 0.93479 0.93529 1.06915 1.18153 0.87293 0.83595 0.75989 1.90812 1.13196 1.87462 1.49103 1.45861 1.10163 1.05285 1.75327 1.22587 0.97508 0.80875 0.97215 0.86201 1.23573 1.03703 0.93329 0.96970 1.20522 0.93659 0.92624 0.97244 1.21890 0.93146 0.93872 0.88757 1.86510 1.42817 1.67455 1.40095 1.19308 0.96014 0.96364 0.93505 1.20985 0.97577 0.98997 0.94455 1.21167 0.96810 0.95957 0.99839 1.21165 1.00073 0.99125 0.93867 1.21117 0.98502 0.98868 0.95332 1.20921 0.97144 0.95890 0.99492 1.23450 1.00926 0.94037 0.98366 1.21100 0.92600 0.97834 0.97216 0.90858 0.90957 0.90389 0.74666 0.91064 0.78238 1.17329 1.17599 0.83615 0.76341 0.89073 0.90044 0.93128 0.92779 0.77182 0.86154 0.86156 0.86234 0.86196 0.86453 0.89990 0.88627 0.84964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.30 9.78 36.01 0.35 0.65 16 2 C -0.11 0.10 5.89 -104.53 -0.62 -0.52 16 3 C 0.14 -0.02 6.62 -39.02 -0.26 -0.28 16 4 O -0.49 0.78 11.41 -18.83 -0.21 0.56 16 5 C -0.14 -0.13 5.27 -104.54 -0.55 -0.68 16 6 C -0.07 -0.06 2.33 36.01 0.08 0.02 16 7 O -0.53 -1.11 12.65 -35.23 -0.45 -1.56 16 8 Si 0.74 0.87 30.17 -169.99 -5.13 -4.26 16 9 C -0.04 -0.06 8.20 -39.22 -0.32 -0.38 16 10 C -0.13 -0.12 5.88 -104.96 -0.62 -0.73 16 11 C 0.56 1.03 7.76 -12.44 -0.10 0.93 16 12 O -0.53 -2.75 15.94 5.29 0.08 -2.66 16 13 N -0.72 0.73 5.30 -54.04 -0.29 0.44 16 14 C 0.12 -0.12 3.89 -67.12 -0.26 -0.38 16 15 H 0.12 0.03 6.98 -51.93 -0.36 -0.33 16 16 C -0.14 0.07 5.98 -25.92 -0.15 -0.08 16 17 C -0.04 0.03 0.89 -154.85 -0.14 -0.11 16 18 C 0.10 -0.10 6.38 37.15 0.24 0.14 16 19 O -0.56 -0.25 13.13 -35.23 -0.46 -0.71 16 20 C -0.05 -0.04 4.33 -104.62 -0.45 -0.49 16 21 C -0.10 -0.15 9.02 -39.58 -0.36 -0.51 16 22 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 23 C -0.12 -0.13 10.05 -39.59 -0.40 -0.53 16 24 C -0.12 -0.10 10.05 -39.59 -0.40 -0.49 16 25 C -0.12 -0.07 9.39 -39.58 -0.37 -0.44 16 26 C -0.13 0.31 6.63 -25.92 -0.17 0.13 16 27 C -0.07 0.08 9.18 -39.22 -0.36 -0.28 16 28 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 30 H 0.08 -0.15 7.52 -51.93 -0.39 -0.54 16 31 H 0.40 -2.16 9.06 45.56 0.41 -1.74 16 32 H 0.07 -0.02 7.82 -51.93 -0.41 -0.43 16 33 H 0.37 0.03 8.60 45.56 0.39 0.42 16 34 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 35 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 36 H 0.15 0.21 4.70 -52.49 -0.25 -0.04 16 37 H 0.40 -1.39 6.75 -40.82 -0.28 -1.67 16 38 H 0.09 -0.06 7.45 -51.93 -0.39 -0.45 16 39 H 0.08 0.06 8.10 -51.93 -0.42 -0.36 16 40 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.05 -0.09 7.34 -51.93 -0.38 -0.47 16 42 H 0.38 -1.30 9.12 45.56 0.42 -0.89 16 43 H 0.12 0.12 7.03 -52.48 -0.37 -0.25 16 44 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 45 H 0.12 -0.06 8.06 -52.48 -0.42 -0.49 16 46 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 47 H 0.12 -0.11 8.03 -52.49 -0.42 -0.53 16 48 H 0.08 -0.25 8.10 -51.92 -0.42 -0.67 16 49 H 0.10 -0.28 8.07 -51.93 -0.42 -0.70 16 50 H 0.13 -0.53 6.39 -52.49 -0.34 -0.86 16 LS Contribution 409.98 15.07 6.18 6.18 Total: 0.00 -9.26 409.98 -10.87 -20.13 By element: Atomic # 1 Polarization: -8.20 SS G_CDS: -5.35 Total: -13.55 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: -5.25 Total: -4.57 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.29 Total: 0.44 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -1.04 Total: -4.37 kcal Atomic # 14 Polarization: 0.87 SS G_CDS: -5.13 Total: -4.26 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.26 -10.87 -20.13 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.538 kcal (2) G-P(sol) polarization free energy of solvation -9.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.801 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds