Wall clock time and date at job start Sat Mar 6 2021 21:34:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38053 * 119.80725 * 300.00041 * 4 2 1 6 6 C 1.38707 * 120.08716 * 179.97438 * 5 4 2 7 7 O 1.35661 * 120.15071 * 179.97438 * 6 5 4 8 8 C 1.40143 * 119.69864 * 0.02562 * 6 5 4 9 9 C 1.47538 * 120.18924 * 180.02562 * 8 6 5 10 10 O 1.21585 * 120.00163 * 0.02562 * 9 8 6 11 11 N 1.34779 * 119.99557 * 179.97438 * 9 8 6 12 12 C 1.46500 * 119.99954 * 180.02562 * 11 9 8 13 13 H 1.09004 * 112.84654 * 23.80198 * 12 11 9 14 14 C 1.53775 * 113.61775 * 154.99898 * 12 11 9 15 15 C 1.53784 * 87.07986 * 139.98184 * 14 12 11 16 16 C 1.52997 * 113.61462 * 89.20323 * 15 14 12 17 17 O 1.42901 * 109.47307 * 179.97438 * 16 15 14 18 18 C 1.50698 * 113.61519 * 220.01995 * 15 14 12 19 19 C 1.38238 * 119.99915 * 359.72878 * 18 15 14 20 20 C 1.38241 * 120.00128 * 179.81184 * 19 18 15 21 21 C 1.38230 * 119.99586 * 0.41732 * 20 19 18 22 22 C 1.38231 * 120.00523 * 359.81145 * 21 20 19 23 23 C 1.38233 * 120.00414 * 180.02562 * 18 15 14 24 24 C 1.53777 * 113.61432 * 252.50295 * 12 11 9 25 25 C 1.39704 * 119.61740 * 0.02562 * 8 6 5 26 26 C 1.37788 * 119.90562 * 359.74390 * 25 8 6 27 27 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 28 28 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 29 29 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 30 30 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 31 31 H 1.07996 * 119.96063 * 359.95760 * 5 4 2 32 32 H 0.96691 * 113.99894 * 89.99800 * 7 6 5 33 33 H 0.96993 * 120.00390 * 0.02562 * 11 9 8 34 34 H 1.09002 * 113.61508 * 254.53192 * 14 12 11 35 35 H 1.08999 * 113.61043 * 25.43347 * 14 12 11 36 36 H 1.09000 * 109.47165 * 299.99727 * 16 15 14 37 37 H 1.09000 * 109.46962 * 59.99862 * 16 15 14 38 38 H 0.96702 * 114.00073 * 180.02562 * 17 16 15 39 39 H 1.08002 * 120.00001 * 0.02562 * 19 18 15 40 40 H 1.08000 * 119.99772 * 180.20740 * 20 19 18 41 41 H 1.08006 * 119.99730 * 179.79562 * 21 20 19 42 42 H 1.07999 * 120.00630 * 179.97438 * 22 21 20 43 43 H 1.07995 * 119.99881 * 359.97438 * 23 18 15 44 44 H 1.09001 * 113.61355 * 334.56350 * 24 12 11 45 45 H 1.08997 * 113.62139 * 105.46921 * 24 12 11 46 46 H 1.07996 * 120.04758 * 179.97438 * 25 8 6 47 47 H 1.08001 * 119.85081 * 180.27762 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5954 -2.0322 -1.4449 6 6 2.0541 -2.6916 -2.5757 7 8 1.7252 -3.9906 -2.7874 8 6 2.8598 -2.0101 -3.4979 9 6 3.3532 -2.7008 -4.7046 10 8 3.0607 -3.8644 -4.9015 11 7 4.1274 -2.0415 -5.5892 12 6 4.6170 -2.7271 -6.7877 13 1 3.9950 -3.5753 -7.0739 14 6 4.9371 -1.7769 -7.9536 15 6 6.1701 -2.6543 -8.2269 16 6 5.8953 -3.8168 -9.1830 17 8 7.0946 -4.5698 -9.3744 18 6 7.4000 -1.8677 -8.6005 19 6 7.3423 -0.4886 -8.6747 20 6 8.4715 0.2333 -9.0136 21 6 9.6562 -0.4246 -9.2865 22 6 9.7128 -1.8040 -9.2169 23 6 8.5844 -2.5256 -8.8748 24 6 6.1197 -3.0505 -6.7419 25 6 3.1930 -0.6730 -3.2679 26 6 2.7245 -0.0322 -2.1416 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 0.9748 -2.5536 -0.7312 32 1 0.9082 -4.1125 -3.2900 33 1 4.3605 -1.1132 -5.4323 34 1 4.1970 -1.8023 -8.7535 35 1 5.1839 -0.7638 -7.6359 36 1 5.1249 -4.4612 -8.7595 37 1 5.5552 -3.4258 -10.1420 38 1 6.9943 -5.3242 -9.9711 39 1 6.4158 0.0252 -8.4647 40 1 8.4272 1.3110 -9.0683 41 1 10.5376 0.1392 -9.5545 42 1 10.6382 -2.3180 -9.4306 43 1 8.6284 -3.6033 -8.8211 44 1 6.6898 -2.3857 -6.0930 45 1 6.3344 -4.1042 -6.5636 46 1 3.8138 -0.1413 -3.9738 47 1 2.9790 1.0028 -1.9670 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270510_13422076.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:34:01 Heat of formation + Delta-G solvation = -62.938114 kcal Electronic energy + Delta-G solvation = -31066.131391 eV Core-core repulsion = 26760.940813 eV Total energy + Delta-G solvation = -4305.190578 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.150 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.02167 -41.34450 -39.85062 -38.89225 -38.38355 -37.28729 -37.23173 -34.78623 -32.86197 -31.70281 -31.50024 -31.14414 -28.49188 -27.41917 -27.00810 -24.87143 -23.97043 -23.61543 -23.16338 -22.29016 -21.53268 -19.97872 -19.30290 -18.72685 -18.60959 -18.31506 -17.83501 -17.18843 -16.85984 -16.55572 -16.31126 -16.17634 -16.09844 -15.92928 -15.69603 -15.56252 -15.43438 -15.16054 -14.97405 -14.56940 -14.32103 -14.09248 -13.76982 -13.62492 -13.48803 -13.36003 -13.29785 -13.09680 -12.95369 -12.45494 -12.40389 -12.28777 -12.11379 -11.83315 -11.65707 -11.55269 -11.39335 -10.87961 -10.83718 -10.66518 -10.18991 -10.03675 -9.82099 -9.68996 -9.46904 -5.06808 -0.43561 0.07567 0.53041 0.64206 1.13513 1.48073 1.74127 1.86169 2.06115 2.55223 2.82003 3.04480 3.05709 3.26224 3.35466 3.40104 3.46460 3.58581 3.66187 3.71749 3.83303 3.91752 3.96999 4.14431 4.17959 4.22228 4.31635 4.34395 4.37071 4.43629 4.51274 4.55419 4.61089 4.66209 4.68793 4.73722 4.87979 4.92859 4.94497 5.00154 5.05064 5.12095 5.16511 5.21304 5.35250 5.46275 5.50571 5.68575 5.80596 5.85473 6.23314 6.25828 6.43374 6.62376 6.68638 7.20213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.081 4.081 3 Si 0.689 3.311 4 C -0.074 4.074 5 C -0.129 4.129 6 C 0.173 3.827 7 O -0.476 6.476 8 C -0.164 4.164 9 C 0.560 3.440 10 O -0.518 6.518 11 N -0.718 5.718 12 C 0.124 3.876 13 H 0.118 0.882 14 C -0.137 4.137 15 C -0.038 4.038 16 C 0.100 3.900 17 O -0.562 6.562 18 C -0.068 4.068 19 C -0.124 4.124 20 C -0.126 4.126 21 C -0.123 4.123 22 C -0.127 4.127 23 C -0.096 4.096 24 C -0.132 4.132 25 C -0.065 4.065 26 C -0.136 4.136 27 H 0.377 0.623 28 H 0.124 0.876 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.141 0.859 32 H 0.398 0.602 33 H 0.399 0.601 34 H 0.082 0.918 35 H 0.099 0.901 36 H 0.054 0.946 37 H 0.052 0.948 38 H 0.379 0.621 39 H 0.121 0.879 40 H 0.119 0.881 41 H 0.118 0.882 42 H 0.120 0.880 43 H 0.147 0.853 44 H 0.089 0.911 45 H 0.080 0.920 46 H 0.134 0.866 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.674 4.007 -2.217 4.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.191 4.191 3 Si 0.590 3.410 4 C -0.075 4.075 5 C -0.148 4.148 6 C 0.126 3.874 7 O -0.287 6.287 8 C -0.168 4.168 9 C 0.347 3.653 10 O -0.393 6.393 11 N -0.370 5.370 12 C 0.019 3.981 13 H 0.136 0.864 14 C -0.175 4.175 15 C -0.039 4.039 16 C 0.022 3.978 17 O -0.369 6.369 18 C -0.068 4.068 19 C -0.141 4.141 20 C -0.144 4.144 21 C -0.141 4.141 22 C -0.145 4.145 23 C -0.113 4.113 24 C -0.171 4.171 25 C -0.084 4.084 26 C -0.153 4.153 27 H 0.225 0.775 28 H 0.141 0.859 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.158 0.842 32 H 0.256 0.744 33 H 0.235 0.765 34 H 0.100 0.900 35 H 0.117 0.883 36 H 0.072 0.928 37 H 0.070 0.930 38 H 0.227 0.773 39 H 0.139 0.861 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.138 0.862 43 H 0.165 0.835 44 H 0.107 0.893 45 H 0.098 0.902 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.055 3.998 -1.096 4.277 hybrid contribution -1.485 0.035 -1.157 1.883 sum -0.431 4.033 -2.253 4.639 Atomic orbital electron populations 1.86630 1.17335 1.79965 1.49347 1.25159 0.84254 1.11367 0.98280 0.94906 0.91606 0.73991 0.80545 1.20390 0.96576 0.94270 0.96287 1.21344 1.01173 0.93949 0.98304 1.18513 0.93455 0.83597 0.91810 1.84765 1.47319 1.19507 1.77106 1.20435 1.04702 0.94844 0.96841 1.18077 0.78320 0.86329 0.82535 1.90831 1.57051 1.15795 1.75664 1.45876 1.52455 1.15574 1.23060 1.22555 0.94864 0.96531 0.84110 0.86394 1.23553 0.96753 0.99011 0.98199 1.20507 0.93220 0.94741 0.95422 1.21890 0.86856 0.91551 0.97456 1.86464 1.33845 1.45732 1.70890 1.19398 0.94188 0.92951 1.00241 1.21116 0.98509 0.93603 1.00921 1.21097 0.93102 0.99748 1.00425 1.21200 0.97962 0.94810 1.00134 1.21260 0.98684 0.94180 1.00358 1.21550 0.91557 1.01485 0.96726 1.23529 0.95877 1.03094 0.94551 1.21139 0.97570 0.92631 0.97021 1.20947 0.99434 1.00216 0.94710 0.77538 0.85863 1.18255 1.17980 0.84157 0.74393 0.76478 0.89953 0.88293 0.92752 0.92979 0.77306 0.86097 0.86265 0.86349 0.86246 0.83547 0.89264 0.90166 0.84854 0.84657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.04 12.76 -35.23 -0.45 -0.49 16 2 C -0.08 0.11 2.81 36.01 0.10 0.21 16 3 Si 0.69 -1.56 29.77 -169.99 -5.06 -6.62 16 4 C -0.07 0.07 5.39 -104.58 -0.56 -0.49 16 5 C -0.13 -0.06 9.53 -39.48 -0.38 -0.43 16 6 C 0.17 0.29 6.72 -38.69 -0.26 0.03 16 7 O -0.48 -1.28 11.58 -40.56 -0.47 -1.75 16 8 C -0.16 -0.14 5.89 -104.84 -0.62 -0.76 16 9 C 0.56 1.22 7.76 -12.47 -0.10 1.12 16 10 O -0.52 -3.00 14.76 -16.59 -0.24 -3.24 16 11 N -0.72 0.61 5.31 -54.06 -0.29 0.32 16 12 C 0.12 -0.09 3.89 -67.12 -0.26 -0.35 16 13 H 0.12 0.08 6.98 -51.93 -0.36 -0.28 16 14 C -0.14 0.31 6.44 -25.92 -0.17 0.14 16 15 C -0.04 0.03 1.06 -154.85 -0.16 -0.14 16 16 C 0.10 -0.11 6.38 37.16 0.24 0.12 16 17 O -0.56 0.38 10.04 -35.23 -0.35 0.03 16 18 C -0.07 -0.07 5.04 -104.62 -0.53 -0.59 16 19 C -0.12 -0.05 9.20 -39.58 -0.36 -0.42 16 20 C -0.13 -0.10 10.05 -39.58 -0.40 -0.50 16 21 C -0.12 -0.15 10.05 -39.59 -0.40 -0.55 16 22 C -0.13 -0.21 10.05 -39.58 -0.40 -0.61 16 23 C -0.10 -0.19 8.84 -39.58 -0.35 -0.54 16 24 C -0.13 0.00 6.99 -25.92 -0.18 -0.18 16 25 C -0.06 0.12 9.54 -39.20 -0.37 -0.25 16 26 C -0.14 0.28 8.64 -39.63 -0.34 -0.06 16 27 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 28 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 29 H -0.26 0.17 7.11 56.52 0.40 0.57 16 30 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 31 H 0.14 0.04 8.06 -52.49 -0.42 -0.39 16 32 H 0.40 -0.40 9.06 45.56 0.41 0.01 16 33 H 0.40 -1.41 6.76 -40.82 -0.28 -1.68 16 34 H 0.08 -0.23 8.10 -51.93 -0.42 -0.65 16 35 H 0.10 -0.33 5.93 -51.93 -0.31 -0.64 16 36 H 0.05 -0.09 7.35 -51.93 -0.38 -0.48 16 37 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 38 H 0.38 -1.66 9.12 45.56 0.42 -1.24 16 39 H 0.12 -0.20 5.76 -52.49 -0.30 -0.50 16 40 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 41 H 0.12 -0.04 8.06 -52.48 -0.42 -0.46 16 42 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 43 H 0.15 0.30 5.43 -52.49 -0.29 0.02 16 44 H 0.09 0.02 8.09 -51.93 -0.42 -0.40 16 45 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 46 H 0.13 -0.65 6.40 -52.49 -0.34 -0.98 16 47 H 0.14 -0.56 4.85 -52.49 -0.25 -0.82 16 LS Contribution 381.66 15.07 5.75 5.75 Total: 0.00 -10.31 381.66 -10.88 -21.19 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -4.27 Total: -10.95 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -5.50 Total: -4.24 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.29 Total: 0.32 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -1.52 Total: -5.45 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.06 Total: -6.62 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -10.31 -10.88 -21.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_13422076.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.752 kcal (2) G-P(sol) polarization free energy of solvation -10.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.186 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.938 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds