Wall clock time and date at job start Sat Mar 6 2021 21:34:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47158 * 2 1 4 4 C 1.50705 * 109.46864 * 119.99964 * 2 1 3 5 5 C 1.38241 * 119.96918 * 244.97793 * 4 2 1 6 6 C 1.38290 * 120.10922 * 180.02562 * 5 4 2 7 7 C 1.38129 * 120.05662 * 359.68358 * 6 5 4 8 8 C 1.38756 * 119.94061 * 0.59068 * 7 6 5 9 9 O 1.35894 * 120.05705 * 179.70151 * 8 7 6 10 10 C 1.42904 * 117.00100 * 359.73008 * 9 8 7 11 11 C 1.52999 * 109.47519 * 179.97438 * 10 9 8 12 12 C 1.50698 * 109.47004 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00472 * 0.02562 * 12 11 10 14 14 N 1.34777 * 119.99538 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72653 * 14 12 11 16 16 H 1.09002 * 112.85201 * 24.08188 * 15 14 12 17 17 C 1.53784 * 113.61491 * 155.28109 * 15 14 12 18 18 C 1.53783 * 87.08338 * 139.98310 * 17 15 14 19 19 C 1.52999 * 113.61695 * 89.11538 * 18 17 15 20 20 O 1.42901 * 109.46903 * 180.02562 * 19 18 17 21 21 C 1.50697 * 113.61150 * 220.02159 * 18 17 15 22 22 C 1.38236 * 119.99876 * 359.71985 * 21 18 17 23 23 C 1.38241 * 119.99903 * 179.74634 * 22 21 18 24 24 C 1.38242 * 119.99899 * 0.55436 * 23 22 21 25 25 C 1.38235 * 119.99670 * 359.69963 * 24 23 22 26 26 C 1.38227 * 120.00348 * 0.02562 * 25 24 23 27 27 C 1.53780 * 87.07825 * 334.56565 * 18 17 15 28 28 C 1.38168 * 119.97064 * 65.00053 * 4 2 1 29 29 H 0.96698 * 114.00135 * 60.00111 * 1 2 3 30 30 H 1.09001 * 109.46917 * 240.00006 * 2 1 3 31 31 H 1.48500 * 110.00312 * 298.68099 * 3 2 1 32 32 H 1.48506 * 109.99922 * 59.99775 * 3 2 1 33 33 H 1.07994 * 119.94645 * 0.02562 * 5 4 2 34 34 H 1.07997 * 119.97188 * 179.97438 * 6 5 4 35 35 H 1.07999 * 120.02958 * 180.31912 * 7 6 5 36 36 H 1.09000 * 109.47055 * 59.99243 * 10 9 8 37 37 H 1.09007 * 109.46875 * 300.00253 * 10 9 8 38 38 H 1.09003 * 109.46690 * 59.99935 * 11 10 9 39 39 H 1.08993 * 109.46773 * 300.00271 * 11 10 9 40 40 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 41 41 H 1.09000 * 113.61044 * 254.52540 * 17 15 14 42 42 H 1.08999 * 113.61555 * 25.34324 * 17 15 14 43 43 H 1.09004 * 109.46968 * 299.99772 * 19 18 17 44 44 H 1.08993 * 109.47250 * 60.00123 * 19 18 17 45 45 H 0.96699 * 114.00077 * 180.02562 * 20 19 18 46 46 H 1.07999 * 120.00487 * 0.02562 * 22 21 18 47 47 H 1.07997 * 120.00214 * 180.27519 * 23 22 21 48 48 H 1.07996 * 120.00204 * 179.72285 * 24 23 22 49 49 H 1.08003 * 119.99704 * 179.97438 * 25 24 23 50 50 H 1.08004 * 120.00648 * 179.97438 * 26 25 24 51 51 H 1.08998 * 113.61772 * 270.88604 * 27 18 17 52 52 H 1.09001 * 113.61751 * 139.98662 * 27 18 17 53 53 H 1.07999 * 120.02788 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6390 -0.0118 2.1907 6 6 3.1017 -0.6609 3.3208 7 6 2.8520 -2.0081 3.4958 8 6 2.1468 -2.7128 2.5307 9 8 1.9051 -4.0396 2.6976 10 6 2.4114 -4.6466 3.8881 11 6 2.0431 -6.1316 3.8998 12 6 2.5776 -6.7717 5.1551 13 8 3.1922 -6.1058 5.9612 14 7 2.3718 -8.0842 5.3823 15 6 2.8966 -8.7078 6.5996 16 1 3.0506 -7.9936 7.4086 17 6 2.1252 -9.9672 7.0283 18 6 3.4879 -10.5853 7.3836 19 6 3.9326 -10.3042 8.8202 20 8 5.2030 -10.9155 9.0538 21 6 3.6079 -12.0393 7.0061 22 6 2.5450 -12.6875 6.4054 23 6 2.6569 -14.0199 6.0544 24 6 3.8279 -14.7072 6.3146 25 6 4.8889 -14.0603 6.9201 26 6 4.7790 -12.7265 7.2659 27 6 4.1033 -9.6277 6.3496 28 6 1.6844 -2.0596 1.3977 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5879 2.4586 -1.2242 32 1 1.5614 2.4679 1.2085 33 1 2.8309 1.0427 2.0582 34 1 3.6548 -0.1130 4.0693 35 1 3.2092 -2.5135 4.3809 36 1 1.9752 -4.1575 4.7591 37 1 3.4959 -4.5405 3.9171 38 1 2.4791 -6.6209 3.0288 39 1 0.9587 -6.2372 3.8710 40 1 1.8800 -8.6168 4.7378 41 1 1.4786 -9.8104 7.8917 42 1 1.6176 -10.4697 6.2050 43 1 4.0144 -9.2278 8.9712 44 1 3.1988 -10.7137 9.5144 45 1 5.5472 -10.7783 9.9470 46 1 1.6286 -12.1518 6.2062 47 1 1.8281 -14.5252 5.5811 48 1 3.9138 -15.7492 6.0444 49 1 5.8036 -14.5973 7.1237 50 1 5.6078 -12.2212 7.7393 51 1 4.1377 -10.0382 5.3405 52 1 5.0536 -9.1968 6.6649 53 1 1.1321 -2.6050 0.6468 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13270510_4549614.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:34:55 Heat of formation + Delta-G solvation = -65.814399 kcal Electronic energy + Delta-G solvation = -33699.043068 eV Core-core repulsion = 29082.652527 eV Total energy + Delta-G solvation = -4616.390541 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -41.91889 -41.31753 -40.48584 -39.14873 -38.85276 -37.45765 -37.24283 -34.81495 -33.30361 -32.61497 -31.74961 -31.66454 -30.78651 -28.32504 -27.04542 -26.94538 -25.67617 -24.42934 -23.67645 -23.22998 -22.45992 -21.86525 -21.44296 -19.74194 -19.13600 -18.65071 -18.57171 -17.92841 -17.82422 -17.48097 -17.28979 -17.04574 -16.94842 -16.22874 -16.11178 -15.96984 -15.78826 -15.63870 -15.58472 -15.47090 -14.81841 -14.55892 -14.46597 -14.41905 -14.30830 -14.01771 -13.90129 -13.59708 -13.50485 -13.48037 -13.33498 -13.09345 -12.95251 -12.89253 -12.41865 -12.34760 -12.24210 -11.99174 -11.83638 -11.81573 -11.67370 -11.54513 -11.35481 -11.02745 -10.77257 -10.54077 -10.11837 -9.93559 -9.75026 -9.51991 -9.28407 -4.91170 0.18310 0.38042 0.47982 0.57710 1.28132 1.49291 1.60846 1.71096 1.95178 2.48877 2.61344 2.84431 3.11319 3.37883 3.42185 3.53253 3.55746 3.69955 3.76039 3.83507 3.86144 3.89696 3.94887 4.02807 4.09534 4.16582 4.21838 4.23131 4.24783 4.32833 4.39352 4.40766 4.47726 4.50953 4.59640 4.62040 4.66820 4.67694 4.75202 4.76327 4.80624 4.84718 4.96499 4.98163 5.00046 5.08532 5.21208 5.23691 5.31101 5.36430 5.44324 5.48541 5.64583 5.68156 5.74024 5.80309 6.19369 6.31668 6.45784 6.58229 6.87642 7.14183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.090 4.090 3 Si 0.771 3.229 4 C -0.047 4.047 5 C -0.161 4.161 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.323 6.323 10 C 0.073 3.927 11 C -0.134 4.134 12 C 0.521 3.479 13 O -0.583 6.583 14 N -0.704 5.704 15 C 0.123 3.877 16 H 0.103 0.897 17 C -0.123 4.123 18 C -0.041 4.041 19 C 0.098 3.902 20 O -0.579 6.579 21 C -0.073 4.073 22 C -0.128 4.128 23 C -0.134 4.134 24 C -0.136 4.136 25 C -0.142 4.142 26 C -0.113 4.113 27 C -0.130 4.130 28 C -0.141 4.141 29 H 0.396 0.604 30 H 0.096 0.904 31 H -0.284 1.284 32 H -0.297 1.297 33 H 0.144 0.856 34 H 0.154 0.846 35 H 0.139 0.861 36 H 0.064 0.936 37 H 0.066 0.934 38 H 0.126 0.874 39 H 0.127 0.873 40 H 0.419 0.581 41 H 0.092 0.908 42 H 0.115 0.885 43 H 0.058 0.942 44 H 0.058 0.942 45 H 0.392 0.608 46 H 0.144 0.856 47 H 0.136 0.864 48 H 0.130 0.870 49 H 0.125 0.875 50 H 0.140 0.860 51 H 0.088 0.912 52 H 0.062 0.938 53 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.176 -2.031 -1.165 2.348 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.198 4.198 3 Si 0.676 3.324 4 C -0.047 4.047 5 C -0.178 4.178 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.072 3.928 9 O -0.237 6.237 10 C -0.002 4.002 11 C -0.173 4.173 12 C 0.309 3.691 13 O -0.463 6.463 14 N -0.356 5.356 15 C 0.018 3.982 16 H 0.121 0.879 17 C -0.161 4.161 18 C -0.042 4.042 19 C 0.021 3.979 20 O -0.388 6.388 21 C -0.073 4.073 22 C -0.145 4.145 23 C -0.152 4.152 24 C -0.154 4.154 25 C -0.160 4.160 26 C -0.131 4.131 27 C -0.169 4.169 28 C -0.160 4.160 29 H 0.246 0.754 30 H 0.114 0.886 31 H -0.211 1.211 32 H -0.225 1.225 33 H 0.161 0.839 34 H 0.172 0.828 35 H 0.157 0.843 36 H 0.082 0.918 37 H 0.085 0.915 38 H 0.144 0.856 39 H 0.145 0.855 40 H 0.257 0.743 41 H 0.110 0.890 42 H 0.133 0.867 43 H 0.076 0.924 44 H 0.076 0.924 45 H 0.243 0.757 46 H 0.161 0.839 47 H 0.154 0.846 48 H 0.148 0.852 49 H 0.143 0.857 50 H 0.158 0.842 51 H 0.107 0.893 52 H 0.080 0.920 53 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.053 -1.378 -0.787 1.588 hybrid contribution -1.011 -0.400 0.144 1.096 sum -1.064 -1.778 -0.643 2.169 Atomic orbital electron populations 1.86552 1.18434 1.80802 1.51075 1.25106 0.84176 1.12279 0.98218 0.93965 0.90349 0.71636 0.76449 1.19286 0.97032 0.92790 0.95618 1.21162 1.01413 1.00509 0.94725 1.21228 0.97301 0.93519 0.97269 1.21555 1.04309 0.96498 1.00598 1.19115 0.95753 0.83022 0.94908 1.85946 1.74671 1.20189 1.42934 1.22454 0.99254 0.93059 0.85434 1.21447 1.05441 0.93451 0.96971 1.20633 0.78592 0.82467 0.87402 1.90732 1.42902 1.63631 1.49012 1.45826 1.56944 1.09055 1.23741 1.22468 0.94635 0.93162 0.87936 0.87916 1.23513 0.95320 0.93843 1.03403 1.20560 0.97930 0.90993 0.94675 1.21936 0.85529 0.96630 0.93828 1.86427 1.36215 1.77996 1.38166 1.19578 0.94155 0.94545 0.98992 1.21403 0.99072 0.94956 0.99111 1.21409 0.98276 0.95014 1.00528 1.21439 0.93938 1.00669 0.99378 1.21444 0.99433 0.95420 0.99698 1.21638 0.98874 0.94305 0.98265 1.23476 0.98228 0.95741 0.99462 1.20338 1.03690 0.94351 0.97630 0.75383 0.88575 1.21060 1.22510 0.83895 0.82839 0.84342 0.91772 0.91534 0.85585 0.85536 0.74318 0.88957 0.86687 0.92409 0.92396 0.75696 0.83890 0.84594 0.85219 0.85675 0.84234 0.89349 0.91958 0.85214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.13 12.81 -148.98 -1.91 -4.04 16 2 C -0.09 -0.09 2.79 71.24 0.20 0.10 16 3 Si 0.77 -1.00 29.85 68.60 2.05 1.05 16 4 C -0.05 -0.23 5.38 -19.88 -0.11 -0.34 16 5 C -0.16 -0.48 8.67 22.28 0.19 -0.29 16 6 C -0.08 -0.19 10.04 22.26 0.22 0.03 16 7 C -0.21 -1.01 9.04 22.37 0.20 -0.81 16 8 C 0.12 0.82 6.69 22.51 0.15 0.97 16 9 O -0.32 -1.80 10.14 -92.36 -0.94 -2.74 16 10 C 0.07 0.15 4.03 71.98 0.29 0.44 16 11 C -0.13 0.48 6.07 29.85 0.18 0.66 16 12 C 0.52 0.36 7.83 87.66 0.69 1.05 16 13 O -0.58 -5.59 15.58 -3.04 -0.05 -5.64 16 14 N -0.70 3.11 5.35 -440.03 -2.36 0.75 16 15 C 0.12 -0.31 3.89 45.52 0.18 -0.14 16 16 H 0.10 0.12 6.98 -2.39 -0.02 0.10 16 17 C -0.12 0.74 6.44 31.12 0.20 0.94 16 18 C -0.04 0.07 1.06 -52.40 -0.06 0.01 16 19 C 0.10 -0.22 6.38 71.98 0.46 0.24 16 20 O -0.58 0.43 10.04 -148.98 -1.50 -1.06 16 21 C -0.07 -0.13 5.04 -19.87 -0.10 -0.23 16 22 C -0.13 0.00 9.20 22.27 0.20 0.21 16 23 C -0.13 -0.14 10.05 22.27 0.22 0.09 16 24 C -0.14 -0.36 10.05 22.27 0.22 -0.14 16 25 C -0.14 -0.58 10.05 22.27 0.22 -0.36 16 26 C -0.11 -0.53 8.84 22.27 0.20 -0.33 16 27 C -0.13 0.07 6.99 31.12 0.22 0.28 16 28 C -0.14 -0.98 9.62 22.37 0.22 -0.77 16 29 H 0.40 -1.87 8.74 -74.06 -0.65 -2.52 16 30 H 0.10 -0.28 7.96 -2.39 -0.02 -0.30 16 31 H -0.28 -0.65 7.11 99.48 0.71 0.05 16 32 H -0.30 -1.72 7.05 99.48 0.70 -1.01 16 33 H 0.14 -0.13 4.86 -2.91 -0.01 -0.15 16 34 H 0.15 -0.42 8.06 -2.91 -0.02 -0.45 16 35 H 0.14 0.39 6.30 -2.91 -0.02 0.37 16 36 H 0.06 0.22 7.61 -2.39 -0.02 0.20 16 37 H 0.07 0.21 7.63 -2.38 -0.02 0.19 16 38 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 39 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 40 H 0.42 -4.40 8.73 -92.71 -0.81 -5.21 16 41 H 0.09 -0.67 8.10 -2.39 -0.02 -0.69 16 42 H 0.12 -1.04 5.93 -2.39 -0.01 -1.06 16 43 H 0.06 -0.19 7.34 -2.38 -0.02 -0.20 16 44 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 45 H 0.39 -3.23 9.12 -74.06 -0.68 -3.90 16 46 H 0.14 -0.75 5.76 -2.91 -0.02 -0.77 16 47 H 0.14 -0.40 8.06 -2.91 -0.02 -0.43 16 48 H 0.13 -0.08 8.06 -2.91 -0.02 -0.10 16 49 H 0.13 0.20 8.06 -2.91 -0.02 0.18 16 50 H 0.14 0.76 5.44 -2.91 -0.02 0.74 16 51 H 0.09 -0.03 8.09 -2.39 -0.02 -0.05 16 52 H 0.06 0.19 8.10 -2.39 -0.02 0.17 16 53 H 0.13 0.82 8.06 -2.91 -0.02 0.79 16 Total: 0.00 -24.53 427.48 -1.62 -26.15 By element: Atomic # 1 Polarization: -14.97 SS G_CDS: -1.13 Total: -16.10 kcal Atomic # 6 Polarization: -2.57 SS G_CDS: 4.21 Total: 1.63 kcal Atomic # 7 Polarization: 3.11 SS G_CDS: -2.36 Total: 0.75 kcal Atomic # 8 Polarization: -9.10 SS G_CDS: -4.39 Total: -13.48 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.05 Total: 1.05 kcal Total: -24.53 -1.62 -26.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_4549614.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.664 kcal (2) G-P(sol) polarization free energy of solvation -24.532 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.618 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.150 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds