Wall clock time and date at job start Sat Mar 6 2021 21:35:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47522 * 2 1 4 4 C 1.50706 * 109.47060 * 120.00231 * 2 1 3 5 5 C 1.38240 * 119.96962 * 245.02244 * 4 2 1 6 6 C 1.38292 * 120.11024 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05498 * 359.76770 * 6 5 4 8 8 C 1.38759 * 119.94155 * 0.50936 * 7 6 5 9 9 O 1.35904 * 120.05121 * 179.74615 * 8 7 6 10 10 C 1.42896 * 117.00266 * 359.72431 * 9 8 7 11 11 C 1.50701 * 109.47005 * 180.02562 * 10 9 8 12 12 O 1.21277 * 119.99990 * 359.97438 * 11 10 9 13 13 N 1.34773 * 119.99877 * 179.97438 * 11 10 9 14 14 C 1.46506 * 120.00137 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.84510 * 23.79898 * 14 13 11 16 16 C 1.53776 * 113.61337 * 155.00130 * 14 13 11 17 17 C 1.53786 * 87.07840 * 140.06502 * 16 14 13 18 18 C 1.53002 * 113.61243 * 89.20097 * 17 16 14 19 19 O 1.42898 * 109.46836 * 181.53124 * 18 17 16 20 20 C 1.50701 * 113.61361 * 220.01530 * 17 16 14 21 21 C 1.38237 * 120.00201 * 305.64211 * 20 17 16 22 22 C 1.38226 * 120.00370 * 179.97438 * 21 20 17 23 23 C 1.38246 * 119.99900 * 0.08915 * 22 21 20 24 24 C 1.38234 * 119.99750 * 359.97438 * 23 22 21 25 25 C 1.38230 * 120.00038 * 125.70770 * 20 17 16 26 26 C 1.53778 * 113.68689 * 252.53797 * 14 13 11 27 27 C 1.38168 * 119.96988 * 64.99690 * 4 2 1 28 28 H 0.96699 * 113.99540 * 59.99550 * 1 2 3 29 29 H 1.08999 * 109.46903 * 239.99736 * 2 1 3 30 30 H 1.48498 * 110.00144 * 298.68082 * 3 2 1 31 31 H 1.48504 * 110.00096 * 59.99691 * 3 2 1 32 32 H 1.07997 * 119.94812 * 359.97438 * 5 4 2 33 33 H 1.08000 * 119.97020 * 180.02562 * 6 5 4 34 34 H 1.08000 * 120.02959 * 180.27296 * 7 6 5 35 35 H 1.08993 * 109.47327 * 59.99847 * 10 9 8 36 36 H 1.09001 * 109.47011 * 299.99945 * 10 9 8 37 37 H 0.97007 * 119.99982 * 359.97438 * 13 11 10 38 38 H 1.08998 * 113.61970 * 25.51715 * 16 14 13 39 39 H 1.09007 * 113.61194 * 254.61104 * 16 14 13 40 40 H 1.09002 * 109.47158 * 301.52510 * 18 17 16 41 41 H 1.08994 * 109.47235 * 61.52799 * 18 17 16 42 42 H 0.96697 * 114.00282 * 179.97438 * 19 18 17 43 43 H 1.08005 * 119.99738 * 0.04437 * 21 20 17 44 44 H 1.08005 * 120.00439 * 180.36720 * 22 21 20 45 45 H 1.07997 * 119.99935 * 179.97438 * 23 22 21 46 46 H 1.07997 * 120.00043 * 179.97438 * 24 23 22 47 47 H 1.08002 * 120.00002 * 359.97438 * 25 20 17 48 48 H 1.09001 * 113.61276 * 105.46289 * 26 14 13 49 49 H 1.08999 * 113.61838 * 334.55444 * 26 14 13 50 50 H 1.07994 * 120.03398 * 0.04386 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.6383 -0.0117 2.1912 6 6 3.1001 -0.6606 3.3217 7 6 2.8518 -2.0081 3.4958 8 6 2.1474 -2.7130 2.5302 9 8 1.9063 -4.0401 2.6969 10 6 2.4125 -4.6470 3.8874 11 6 2.0515 -6.1101 3.8979 12 8 1.4224 -6.5861 2.9768 13 7 2.4279 -6.8896 4.9309 14 6 2.0776 -8.3121 4.9409 15 1 1.8996 -8.7111 3.9423 16 6 3.0274 -9.1744 5.7888 17 6 1.7817 -9.9433 6.2601 18 6 1.4197 -11.1308 5.3657 19 8 0.2349 -11.7569 5.8619 20 6 1.8108 -10.3006 7.7238 21 6 2.8852 -10.9978 8.2439 22 6 2.9121 -11.3251 9.5866 23 6 1.8637 -10.9568 10.4090 24 6 0.7887 -10.2607 9.8887 25 6 0.7625 -9.9324 8.5461 26 6 0.9762 -8.6700 5.9526 27 6 1.6844 -2.0596 1.3976 28 1 -0.3932 0.4418 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5881 2.4585 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 2.8302 1.0428 2.0587 33 1 3.6518 -0.1124 4.0710 34 1 3.2089 -2.5135 4.3810 35 1 1.9756 -4.1583 4.7583 36 1 3.4968 -4.5404 3.9168 37 1 2.9315 -6.5089 5.6675 38 1 3.5261 -8.6214 6.5846 39 1 3.7150 -9.7782 5.1963 40 1 1.2464 -10.7799 4.3484 41 1 2.2387 -11.8499 5.3675 42 1 -0.0542 -12.5194 5.3421 43 1 3.7041 -11.2858 7.6014 44 1 3.7543 -11.8646 9.9942 45 1 1.8846 -11.2128 11.4580 46 1 -0.0305 -9.9734 10.5310 47 1 -0.0773 -9.3882 8.1397 48 1 0.0078 -8.8665 5.4925 49 1 0.9141 -7.9789 6.7933 50 1 1.1324 -2.6052 0.6467 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13270510_4860298.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:35:43 Heat of formation + Delta-G solvation = -61.322255 kcal Electronic energy + Delta-G solvation = -32037.926887 eV Core-core repulsion = 27577.268759 eV Total energy + Delta-G solvation = -4460.658128 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.95525 -41.34864 -40.29099 -39.13645 -38.65793 -37.37355 -37.16484 -34.83604 -32.58959 -32.04838 -31.78921 -31.45840 -29.47806 -28.02694 -27.04836 -26.76149 -24.79209 -23.63328 -23.15277 -22.99981 -22.04267 -21.52841 -19.80771 -19.17205 -18.53090 -18.47298 -18.27982 -17.91072 -17.46326 -17.37066 -17.11476 -16.73208 -16.18669 -16.00850 -15.85977 -15.77046 -15.51970 -15.40782 -15.32985 -14.78666 -14.53379 -14.37584 -14.27694 -14.04530 -13.75836 -13.70756 -13.67162 -13.49840 -13.40172 -13.34228 -13.08973 -12.51939 -12.45374 -12.30948 -12.14904 -12.10244 -11.97326 -11.64998 -11.54587 -11.41099 -10.92362 -10.85635 -10.52031 -10.16383 -9.88812 -9.74778 -9.54872 -9.23148 -4.96344 0.22911 0.44316 0.51005 0.57435 1.24783 1.46116 1.46479 1.60019 1.95199 2.55163 2.65376 2.89889 2.92482 3.21516 3.34685 3.44357 3.56814 3.61868 3.74810 3.79274 3.80229 3.90334 3.90869 3.97160 4.06318 4.14431 4.16788 4.22685 4.25466 4.28805 4.34390 4.39212 4.45668 4.53373 4.57731 4.59602 4.63063 4.64733 4.75762 4.89876 4.95829 4.99741 5.00280 5.16670 5.19453 5.25489 5.37246 5.37979 5.49484 5.63643 5.66990 5.69298 5.75440 6.15534 6.24386 6.38902 6.44399 6.65449 7.07417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.517 3.483 12 O -0.512 6.512 13 N -0.717 5.717 14 C 0.124 3.876 15 H 0.119 0.881 16 C -0.128 4.128 17 C -0.040 4.040 18 C 0.101 3.899 19 O -0.564 6.564 20 C -0.052 4.052 21 C -0.116 4.116 22 C -0.120 4.120 23 C -0.124 4.124 24 C -0.120 4.120 25 C -0.103 4.103 26 C -0.137 4.137 27 C -0.119 4.119 28 H 0.381 0.619 29 H 0.079 0.921 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.095 0.905 37 H 0.403 0.597 38 H 0.097 0.903 39 H 0.082 0.918 40 H 0.054 0.946 41 H 0.051 0.949 42 H 0.381 0.619 43 H 0.118 0.882 44 H 0.120 0.880 45 H 0.120 0.880 46 H 0.120 0.880 47 H 0.120 0.880 48 H 0.080 0.920 49 H 0.091 0.909 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.993 0.403 2.005 6.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.039 4.039 11 C 0.302 3.698 12 O -0.385 6.385 13 N -0.370 5.370 14 C 0.020 3.980 15 H 0.137 0.863 16 C -0.167 4.167 17 C -0.041 4.041 18 C 0.023 3.977 19 O -0.369 6.369 20 C -0.052 4.052 21 C -0.135 4.135 22 C -0.138 4.138 23 C -0.142 4.142 24 C -0.138 4.138 25 C -0.121 4.121 26 C -0.176 4.176 27 C -0.138 4.138 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.186 1.186 31 H -0.180 1.180 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.112 0.888 36 H 0.113 0.887 37 H 0.238 0.762 38 H 0.115 0.885 39 H 0.101 0.899 40 H 0.072 0.928 41 H 0.069 0.931 42 H 0.229 0.771 43 H 0.136 0.864 44 H 0.138 0.862 45 H 0.138 0.862 46 H 0.138 0.862 47 H 0.138 0.862 48 H 0.099 0.901 49 H 0.110 0.890 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.353 0.932 2.171 5.851 hybrid contribution -0.786 -0.474 -0.235 0.947 sum 4.567 0.458 1.936 4.981 Atomic orbital electron populations 1.86605 1.17573 1.80207 1.49769 1.24863 0.84685 1.11165 0.98136 0.94961 0.91611 0.74272 0.80173 1.19023 0.96792 0.92731 0.94796 1.20926 1.01471 0.99811 0.94728 1.20879 0.97691 0.93585 0.96898 1.21288 1.04832 0.96075 1.00266 1.19004 0.95470 0.82426 0.94781 1.86167 1.73824 1.20081 1.40007 1.22470 1.00696 0.91867 0.88851 1.20080 0.79698 0.87532 0.82497 1.90783 1.37894 1.74696 1.35136 1.45783 1.58307 1.09654 1.23267 1.22582 0.95865 0.79457 1.00132 0.86317 1.23449 0.96078 0.97549 0.99587 1.20523 0.97431 0.93845 0.92290 1.21890 0.87685 0.93030 0.95067 1.86506 1.43987 1.49073 1.57352 1.19302 0.94525 0.98078 0.93319 1.20924 0.98202 0.98923 0.95403 1.21123 0.98723 1.00131 0.93805 1.21171 0.94340 0.98820 0.99878 1.21168 0.98396 0.98758 0.95435 1.20980 0.97802 0.99937 0.93331 1.23570 0.98904 0.95841 0.99297 1.20243 1.02526 0.93714 0.97318 0.77145 0.90318 1.18636 1.17963 0.85297 0.84999 0.85207 0.88753 0.88671 0.76184 0.88491 0.89934 0.92832 0.93060 0.77147 0.86419 0.86157 0.86207 0.86152 0.86185 0.90084 0.89020 0.84775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.10 12.81 -35.23 -0.45 -1.55 16 2 C -0.08 -0.05 2.79 36.01 0.10 0.05 16 3 Si 0.69 -0.48 29.85 -169.99 -5.07 -5.55 16 4 C -0.03 -0.07 5.38 -104.64 -0.56 -0.63 16 5 C -0.15 -0.12 8.67 -39.56 -0.34 -0.46 16 6 C -0.07 0.01 10.04 -39.60 -0.40 -0.39 16 7 C -0.21 -0.06 9.04 -39.43 -0.36 -0.41 16 8 C 0.13 0.34 6.69 -39.21 -0.26 0.08 16 9 O -0.29 -1.01 9.67 -39.35 -0.38 -1.39 16 10 C 0.04 -0.02 5.22 36.01 0.19 0.16 16 11 C 0.52 0.77 7.91 -10.99 -0.09 0.68 16 12 O -0.51 -3.32 16.10 -14.35 -0.23 -3.55 16 13 N -0.72 1.22 5.36 -53.02 -0.28 0.93 16 14 C 0.12 -0.13 3.89 -67.12 -0.26 -0.39 16 15 H 0.12 0.07 6.96 -51.93 -0.36 -0.29 16 16 C -0.13 0.32 6.63 -25.92 -0.17 0.15 16 17 C -0.04 0.03 0.88 -154.84 -0.14 -0.11 16 18 C 0.10 -0.08 6.37 37.16 0.24 0.16 16 19 O -0.56 -0.37 13.17 -35.23 -0.46 -0.83 16 20 C -0.05 -0.04 4.36 -104.62 -0.46 -0.50 16 21 C -0.12 -0.06 9.39 -39.59 -0.37 -0.44 16 22 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 23 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 24 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 25 C -0.10 -0.15 9.02 -39.58 -0.36 -0.51 16 26 C -0.14 0.07 5.99 -25.92 -0.16 -0.09 16 27 C -0.12 -0.39 9.62 -39.43 -0.38 -0.77 16 28 H 0.38 -0.80 8.74 45.56 0.40 -0.40 16 29 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 31 H -0.25 -0.58 7.05 56.52 0.40 -0.19 16 32 H 0.13 -0.13 4.86 -52.49 -0.26 -0.38 16 33 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 34 H 0.13 -0.33 6.30 -52.49 -0.33 -0.67 16 35 H 0.09 -0.28 7.65 -51.93 -0.40 -0.68 16 36 H 0.10 -0.32 7.67 -51.93 -0.40 -0.72 16 37 H 0.40 -1.94 8.73 -40.82 -0.36 -2.29 16 38 H 0.10 -0.31 8.07 -51.93 -0.42 -0.73 16 39 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 40 H 0.05 -0.08 7.34 -51.93 -0.38 -0.46 16 41 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.38 -1.22 9.12 45.56 0.42 -0.81 16 43 H 0.12 -0.12 8.03 -52.48 -0.42 -0.54 16 44 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 45 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 46 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 47 H 0.12 0.12 7.01 -52.49 -0.37 -0.25 16 48 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 49 H 0.09 -0.07 7.43 -51.93 -0.39 -0.46 16 50 H 0.13 0.48 8.06 -52.49 -0.42 0.06 16 LS Contribution 413.66 15.07 6.23 6.23 Total: 0.00 -11.79 413.66 -11.87 -23.66 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -6.25 Total: -12.99 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -4.97 Total: -4.96 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.28 Total: 0.93 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.53 Total: -7.32 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.07 Total: -5.55 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -11.79 -11.87 -23.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13270510_4860298.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.658 kcal (2) G-P(sol) polarization free energy of solvation -11.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.664 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds