Wall clock time and date at job start Sat Mar 6 2021 21:35:55
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 N 1.46502 * 1
3 3 C 1.37644 * 125.67958 * 2 1
4 4 C 1.46677 * 126.22251 * 359.97438 * 3 2 1
5 5 O 1.21697 * 120.00111 * 5.44658 * 4 3 2
6 6 N 1.34776 * 119.99656 * 185.44695 * 4 3 2
7 7 C 1.46497 * 119.99554 * 185.14288 * 6 4 3
8 8 H 1.08997 * 112.85314 * 23.80935 * 7 6 4
9 9 C 1.53788 * 113.61219 * 155.00071 * 7 6 4
10 10 C 1.53778 * 87.08021 * 139.98351 * 9 7 6
11 11 C 1.52999 * 113.61662 * 89.20056 * 10 9 7
12 12 O 1.42907 * 109.47036 * 179.97438 * 11 10 9
13 13 C 1.50706 * 113.61252 * 220.01862 * 10 9 7
14 14 C 1.38232 * 119.99584 * 359.72957 * 13 10 9
15 15 C 1.38241 * 119.99440 * 179.78639 * 14 13 10
16 16 C 1.38238 * 120.00217 * 0.44094 * 15 14 13
17 17 C 1.38236 * 119.99665 * 359.80685 * 16 15 14
18 18 C 1.38232 * 120.00119 * 359.97438 * 17 16 15
19 19 C 1.53774 * 87.08182 * 334.56737 * 10 9 7
20 20 C 1.37876 * 107.55017 * 179.97438 * 3 2 1
21 21 C 1.39876 * 107.09572 * 0.02562 * 20 3 2
22 22 Br 1.89095 * 126.07734 * 180.26222 * 21 20 3
23 23 C 1.35504 * 107.85004 * 359.97438 * 21 20 3
24 24 C 1.50699 * 125.57019 * 179.97438 * 23 21 20
25 25 O 1.42906 * 109.47090 * 150.02904 * 24 23 21
26 26 Si 1.86295 * 109.47309 * 30.02809 * 24 23 21
27 27 H 1.09000 * 109.46825 * 265.38835 * 1 2 3
28 28 H 1.09005 * 109.46840 * 25.37691 * 1 2 3
29 29 H 1.08996 * 109.47169 * 145.38134 * 1 2 3
30 30 H 0.97000 * 120.00337 * 5.14325 * 6 4 3
31 31 H 1.09005 * 113.61454 * 254.52768 * 9 7 6
32 32 H 1.09000 * 113.61476 * 25.34804 * 9 7 6
33 33 H 1.08995 * 109.46999 * 299.99947 * 11 10 9
34 34 H 1.09000 * 109.46782 * 60.00082 * 11 10 9
35 35 H 0.96704 * 113.99443 * 180.02562 * 12 11 10
36 36 H 1.07995 * 120.00829 * 359.97438 * 14 13 10
37 37 H 1.08000 * 120.00111 * 180.27326 * 15 14 13
38 38 H 1.07997 * 120.00178 * 179.83185 * 16 15 14
39 39 H 1.08002 * 119.99982 * 180.02562 * 17 16 15
40 40 H 1.08002 * 119.99845 * 179.97438 * 18 17 16
41 41 H 1.09005 * 113.61685 * 270.88588 * 19 10 9
42 42 H 1.09002 * 113.62016 * 139.98306 * 19 10 9
43 43 H 1.08007 * 126.45546 * 180.02562 * 20 3 2
44 44 H 1.08997 * 109.47741 * 270.02844 * 24 23 21
45 45 H 0.96703 * 114.00221 * 180.02562 * 25 24 23
46 46 H 1.48506 * 110.00119 * 59.99655 * 26 24 23
47 47 H 1.48506 * 110.00434 * 181.31603 * 26 24 23
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 7 1.4650 0.0000 0.0000
3 6 2.2678 1.1181 0.0000
4 6 1.8122 2.5123 -0.0005
5 8 0.6259 2.7648 0.0990
6 7 2.7074 3.5137 -0.1113
7 6 2.2663 4.9061 0.0012
8 1 1.3376 5.0120 0.5619
9 6 3.3752 5.8685 0.4587
10 6 2.8144 6.8740 -0.5608
11 6 1.7219 7.7806 0.0098
12 8 1.2666 8.6757 -1.0069
13 6 3.8799 7.6381 -1.3038
14 6 5.2149 7.4035 -1.0324
15 6 6.1923 8.1013 -1.7171
16 6 5.8346 9.0401 -2.6667
17 6 4.4995 9.2783 -2.9343
18 6 3.5221 8.5773 -2.2529
19 6 2.2698 5.6635 -1.3371
20 6 3.5781 0.6890 0.0006
21 6 3.5529 -0.7095 0.0003
22 35 5.0609 -1.8504 0.0079
23 6 2.2558 -1.1015 0.0002
24 6 1.7713 -2.5285 -0.0006
25 8 0.5130 -2.6047 0.6725
26 14 3.0116 -3.6060 0.8776
27 1 -0.3633 -0.0826 1.0244
28 1 -0.3633 0.9286 -0.4405
29 1 -0.3633 -0.8457 -0.5838
30 1 3.6437 3.3124 -0.2654
31 1 3.2719 6.1930 1.4942
32 1 4.3806 5.5200 0.2226
33 1 0.8882 7.1704 0.3571
34 1 2.1249 8.3541 0.8445
35 1 0.5720 9.2818 -0.7150
36 1 5.4944 6.6730 -0.2877
37 1 7.2354 7.9149 -1.5083
38 1 6.5981 9.5871 -3.1996
39 1 4.2199 10.0114 -3.6765
40 1 2.4790 8.7638 -2.4617
41 1 2.9730 5.2596 -2.0655
42 1 1.2743 5.8224 -1.7515
43 1 4.4584 1.3149 0.0011
44 1 1.6549 -2.8722 -1.0284
45 1 0.1406 -3.4963 0.7105
46 1 3.1795 -3.1478 2.2802
47 1 2.5609 -5.0208 0.8560
There are 66 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 66
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_13270510_5000100.mol2 47
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sat Mar 6 2021 21:35:55
Heat of formation + Delta-G solvation = -4.568384 kcal
Electronic energy + Delta-G solvation = -31881.336387 eV
Core-core repulsion = 27464.803710 eV
Total energy + Delta-G solvation = -4416.532677 eV
No. of doubly occupied orbitals = 66
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 421.072 amu
Computer time = 1.27 seconds
Orbital eigenvalues (eV)
-42.88750 -41.79330 -40.16131 -38.85820 -37.93198 -37.23185 -35.17896 -34.43060
-32.58248 -31.71854 -31.65503 -31.11426 -28.44345 -27.39438 -26.94972 -26.89731
-24.67915 -23.44574 -23.15188 -22.29906 -21.52069 -20.57376 -19.71469 -18.78595
-18.64096 -18.53011 -17.74652 -17.40751 -17.11434 -16.81154 -16.25804 -16.21791
-15.98232 -15.74308 -15.47343 -15.41845 -15.16584 -14.77897 -14.61543 -14.45415
-14.28941 -14.11186 -14.02446 -13.84662 -13.59320 -13.46369 -13.31562 -13.18888
-13.05850 -12.95859 -12.78856 -12.39543 -12.22345 -12.02356 -11.82064 -11.58628
-11.52512 -11.33257 -11.16406 -10.82749 -10.75213 -10.19958 -9.88119 -9.71888
-9.50060 -9.30632 -4.69285 0.13952 0.34386 0.50908 0.60852 0.89157
1.23802 1.41464 1.57664 1.94445 2.11115 2.28070 2.87059 2.92550
3.13187 3.43618 3.45314 3.51376 3.58637 3.72651 3.78842 3.88961
4.01900 4.14656 4.19333 4.20093 4.26022 4.30394 4.36710 4.39236
4.43021 4.52409 4.61721 4.62340 4.62811 4.69935 4.77929 4.83365
4.87126 4.99547 5.01263 5.08602 5.22503 5.24756 5.33987 5.46323
5.60964 5.67648 5.76837 5.78113 5.83153 6.22320 6.39696 6.42664
6.89390 7.03451
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.080 3.920
2 N -0.391 5.391
3 C -0.062 4.062
4 C 0.592 3.408
5 O -0.577 6.577
6 N -0.690 5.690
7 C 0.127 3.873
8 H 0.105 0.895
9 C -0.123 4.123
10 C -0.038 4.038
11 C 0.097 3.903
12 O -0.579 6.579
13 C -0.073 4.073
14 C -0.127 4.127
15 C -0.134 4.134
16 C -0.136 4.136
17 C -0.143 4.143
18 C -0.113 4.113
19 C -0.130 4.130
20 C -0.088 4.088
21 C -0.195 4.195
22 Br 0.094 6.906
23 C 0.095 3.905
24 C -0.044 4.044
25 O -0.557 6.557
26 Si 0.620 3.380
27 H 0.074 0.926
28 H 0.092 0.908
29 H 0.102 0.898
30 H 0.419 0.581
31 H 0.095 0.905
32 H 0.118 0.882
33 H 0.058 0.942
34 H 0.059 0.941
35 H 0.392 0.608
36 H 0.145 0.855
37 H 0.137 0.863
38 H 0.129 0.871
39 H 0.124 0.876
40 H 0.140 0.860
41 H 0.089 0.911
42 H 0.062 0.938
43 H 0.192 0.808
44 H 0.111 0.889
45 H 0.402 0.598
46 H -0.297 1.297
47 H -0.252 1.252
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 3.688 0.268 -0.904 3.807
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.061 4.061
2 N -0.063 5.063
3 C -0.176 4.176
4 C 0.380 3.620
5 O -0.459 6.459
6 N -0.341 5.341
7 C 0.023 3.977
8 H 0.123 0.877
9 C -0.160 4.160
10 C -0.039 4.039
11 C 0.020 3.980
12 O -0.388 6.388
13 C -0.073 4.073
14 C -0.144 4.144
15 C -0.152 4.152
16 C -0.154 4.154
17 C -0.161 4.161
18 C -0.131 4.131
19 C -0.169 4.169
20 C -0.115 4.115
21 C -0.281 4.281
22 Br 0.178 6.822
23 C -0.028 4.028
24 C -0.154 4.154
25 O -0.368 6.368
26 Si 0.522 3.478
27 H 0.093 0.907
28 H 0.111 0.889
29 H 0.120 0.880
30 H 0.257 0.743
31 H 0.113 0.887
32 H 0.136 0.864
33 H 0.076 0.924
34 H 0.077 0.923
35 H 0.243 0.757
36 H 0.163 0.837
37 H 0.155 0.845
38 H 0.147 0.853
39 H 0.142 0.858
40 H 0.157 0.843
41 H 0.107 0.893
42 H 0.081 0.919
43 H 0.209 0.791
44 H 0.129 0.871
45 H 0.254 0.746
46 H -0.223 1.223
47 H -0.177 1.177
Dipole moment (debyes) X Y Z Total
from point charges 3.665 -0.152 -0.431 3.693
hybrid contribution -1.900 0.128 0.429 1.952
sum 1.765 -0.024 -0.002 1.765
Atomic orbital electron populations
1.22294 0.74394 1.05127 1.04266 1.43928 1.07834 1.04038 1.50492
1.20213 0.90442 0.87781 1.19130 1.17008 0.85484 0.83797 0.75706
1.90799 1.17619 1.85090 1.52382 1.45490 1.11643 1.04873 1.72080
1.22539 0.99392 0.78289 0.97522 0.87716 1.23543 0.99344 0.93170
0.99958 1.20523 0.94024 0.92681 0.96655 1.21951 0.95075 0.91270
0.89723 1.86434 1.60178 1.52551 1.39627 1.19576 0.93653 0.97106
0.97005 1.21415 0.92014 1.00562 1.00447 1.21410 1.00348 0.96702
0.96693 1.21437 0.96472 0.98815 0.98721 1.21437 0.93512 1.00578
1.00547 1.21628 1.00617 0.95290 0.95518 1.23482 1.01636 0.94587
0.97158 1.21510 0.95612 0.92394 1.01956 1.20619 0.90331 0.95113
1.21993 1.96294 1.32402 1.56194 1.97333 1.20048 0.89411 0.88490
1.04859 1.24321 0.93538 0.94595 1.02943 1.86455 1.34324 1.36420
1.79567 0.92921 0.93654 0.77968 0.83220 0.90716 0.88927 0.87995
0.74296 0.88673 0.86421 0.92403 0.92309 0.75738 0.83714 0.84530
0.85272 0.85781 0.84286 0.89264 0.91911 0.79129 0.87099 0.74583
1.22316 1.17715
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.08 0.36 9.28 127.77 1.19 1.54 16
2 N -0.39 -2.21 3.16 -519.61 -1.64 -3.85 16
3 C -0.06 -0.24 6.88 40.35 0.28 0.04 16
4 C 0.59 2.81 7.77 86.45 0.67 3.48 16
5 O -0.58 -6.78 14.28 -4.34 -0.06 -6.84 16
6 N -0.69 1.64 5.33 -444.00 -2.37 -0.73 16
7 C 0.13 -0.28 3.86 45.52 0.18 -0.10 16
8 H 0.10 0.12 7.05 -2.39 -0.02 0.10 16
9 C -0.12 0.77 6.44 31.12 0.20 0.97 16
10 C -0.04 0.07 1.06 -52.40 -0.06 0.02 16
11 C 0.10 -0.24 6.38 71.98 0.46 0.22 16
12 O -0.58 0.51 10.04 -148.98 -1.50 -0.98 16
13 C -0.07 -0.11 5.03 -19.86 -0.10 -0.21 16
14 C -0.13 0.06 9.20 22.27 0.20 0.26 16
15 C -0.13 -0.09 10.05 22.27 0.22 0.13 16
16 C -0.14 -0.34 10.05 22.27 0.22 -0.11 16
17 C -0.14 -0.57 10.05 22.27 0.22 -0.35 16
18 C -0.11 -0.51 8.84 22.27 0.20 -0.31 16
19 C -0.13 0.05 6.99 31.12 0.22 0.27 16
20 C -0.09 0.07 10.33 22.58 0.23 0.30 16
21 C -0.20 -0.28 6.16 22.03 0.14 -0.15 16
22 Br 0.09 -0.19 28.23 -20.37 -0.58 -0.77 16
23 C 0.09 0.37 6.18 41.34 0.26 0.63 16
24 C -0.04 -0.04 2.89 71.24 0.21 0.17 16
25 O -0.56 -0.58 10.47 -148.98 -1.56 -2.14 16
26 Si 0.62 1.66 27.09 68.60 1.86 3.52 16
27 H 0.07 0.42 8.14 -2.39 -0.02 0.40 16
28 H 0.09 0.61 6.18 -2.38 -0.01 0.59 16
29 H 0.10 0.14 7.11 -2.39 -0.02 0.12 16
30 H 0.42 -3.52 7.68 -92.71 -0.71 -4.23 16
31 H 0.09 -0.74 8.10 -2.38 -0.02 -0.76 16
32 H 0.12 -1.13 5.93 -2.39 -0.01 -1.14 16
33 H 0.06 -0.20 7.35 -2.39 -0.02 -0.22 16
34 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16
35 H 0.39 -3.25 9.12 -74.05 -0.68 -3.92 16
36 H 0.15 -0.85 5.77 -2.91 -0.02 -0.87 16
37 H 0.14 -0.46 8.06 -2.91 -0.02 -0.49 16
38 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16
39 H 0.12 0.21 8.06 -2.91 -0.02 0.18 16
40 H 0.14 0.74 5.44 -2.91 -0.02 0.73 16
41 H 0.09 -0.01 8.09 -2.38 -0.02 -0.03 16
42 H 0.06 0.20 8.10 -2.39 -0.02 0.18 16
43 H 0.19 -1.63 7.49 -2.91 -0.02 -1.65 16
44 H 0.11 -0.42 7.96 -2.39 -0.02 -0.44 16
45 H 0.40 -2.72 8.74 -74.06 -0.65 -3.37 16
46 H -0.30 -3.39 7.11 99.48 0.71 -2.68 16
47 H -0.25 -1.29 7.11 99.48 0.71 -0.59 16
Total: 0.00 -21.59 390.81 -1.85 -23.44
By element:
Atomic # 1 Polarization: -17.50 SS G_CDS: -0.94 Total: -18.44 kcal
Atomic # 6 Polarization: 1.86 SS G_CDS: 4.93 Total: 6.80 kcal
Atomic # 7 Polarization: -0.57 SS G_CDS: -4.01 Total: -4.58 kcal
Atomic # 8 Polarization: -6.85 SS G_CDS: -3.12 Total: -9.97 kcal
Atomic # 14 Polarization: 1.66 SS G_CDS: 1.86 Total: 3.52 kcal
Atomic # 35 Polarization: -0.19 SS G_CDS: -0.58 Total: -0.77 kcal
Total: -21.59 -1.85 -23.44 kcal
The number of atoms in the molecule is 47
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_13270510_5000100.mol2 47
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 18.874 kcal
(2) G-P(sol) polarization free energy of solvation -21.593 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.719 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.850 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.442 kcal
(6) G-S(sol) free energy of system = (1) + (5) -4.568 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.27 seconds