Wall clock time and date at job start Sat Mar 6 2021 21:21:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 O 1.20761 * 119.99996 * 2 1 4 4 C 1.50702 * 120.00303 * 179.97438 * 2 1 3 5 5 H 1.09003 * 109.47108 * 330.00221 * 4 2 1 6 6 C 1.52996 * 109.47261 * 89.99943 * 4 2 1 7 7 C 1.52994 * 109.47386 * 180.02562 * 6 4 2 8 8 C 1.52999 * 109.47449 * 300.00168 * 7 6 4 9 9 H 1.09003 * 109.46903 * 300.00159 * 8 7 6 10 10 N 1.46493 * 109.47638 * 179.97438 * 8 7 6 11 11 C 1.34784 * 119.99864 * 84.99998 * 10 8 7 12 12 O 1.21597 * 119.99613 * 359.72388 * 11 10 8 13 13 C 1.47520 * 119.99967 * 179.72956 * 11 10 8 14 14 C 1.39776 * 120.06775 * 179.72575 * 13 11 10 15 15 C 1.37625 * 119.92966 * 179.76151 * 14 13 11 16 16 C 1.50700 * 119.96673 * 180.27370 * 15 14 13 17 17 O 1.42898 * 109.47515 * 105.21328 * 16 15 14 18 18 Si 1.86304 * 109.46876 * 345.21426 * 16 15 14 19 19 C 1.39193 * 120.07089 * 0.49112 * 15 14 13 20 20 N 1.39053 * 119.93286 * 179.76161 * 19 15 14 21 21 C 1.46902 * 110.99604 * 120.02118 * 20 19 15 22 22 C 1.46896 * 110.99847 * 243.97353 * 20 19 15 23 23 C 1.39243 * 120.13637 * 359.78129 * 19 15 14 24 24 C 1.37586 * 120.06723 * 359.95917 * 23 19 15 25 25 C 1.53006 * 109.46809 * 59.99578 * 8 7 6 26 26 C 1.52994 * 109.47460 * 300.00415 * 25 8 7 27 27 H 1.09004 * 109.46958 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47292 * 300.00089 * 1 2 3 29 29 H 1.08999 * 109.46831 * 60.00576 * 1 2 3 30 30 H 1.09003 * 109.47419 * 300.00597 * 6 4 2 31 31 H 1.09003 * 109.46833 * 60.00109 * 6 4 2 32 32 H 1.09003 * 109.47448 * 180.02562 * 7 6 4 33 33 H 1.09003 * 109.47197 * 60.00146 * 7 6 4 34 34 H 0.97000 * 120.00740 * 264.72691 * 10 8 7 35 35 H 1.08009 * 120.03377 * 0.02562 * 14 13 11 36 36 H 1.09000 * 109.47388 * 225.21861 * 16 15 14 37 37 H 0.96695 * 114.00174 * 179.97438 * 17 16 15 38 38 H 1.48500 * 110.00207 * 60.00382 * 18 16 15 39 39 H 1.48505 * 109.99990 * 181.31925 * 18 16 15 40 40 H 1.08993 * 109.47612 * 60.00454 * 21 20 19 41 41 H 1.09010 * 109.46527 * 180.02562 * 21 20 19 42 42 H 1.08997 * 109.46995 * 299.99736 * 21 20 19 43 43 H 1.09002 * 109.47561 * 60.00285 * 22 20 19 44 44 H 1.08999 * 109.47144 * 179.97438 * 22 20 19 45 45 H 1.09003 * 109.47529 * 300.00147 * 22 20 19 46 46 H 1.08004 * 119.96461 * 179.97438 * 23 19 15 47 47 H 1.07999 * 120.03324 * 179.97438 * 24 23 19 48 48 H 1.09003 * 109.46914 * 60.00587 * 25 8 7 49 49 H 1.09004 * 109.46741 * 180.02562 * 25 8 7 50 50 H 1.09003 * 109.47448 * 180.02562 * 26 25 8 51 51 H 1.09003 * 109.47197 * 299.99998 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2606 -1.3051 0.0006 5 1 1.6715 -2.0646 0.5147 6 6 2.5156 -1.7474 -1.4417 7 6 3.2801 -3.0727 -1.4411 8 6 4.6169 -2.8900 -0.7198 9 1 5.2063 -2.1308 -1.2338 10 7 5.3487 -4.1591 -0.7187 11 6 6.1129 -4.4973 -1.7762 12 8 6.1909 -3.7512 -2.7332 13 6 6.8545 -5.7725 -1.7726 14 6 7.6429 -6.1273 -2.8709 15 6 8.3375 -7.3153 -2.8625 16 6 9.1926 -7.6958 -4.0436 17 8 10.5709 -7.5180 -3.7108 18 14 8.7602 -6.6138 -5.4973 19 6 8.2474 -8.1681 -1.7660 20 7 8.9465 -9.3701 -1.7626 21 6 9.8923 -9.4258 -0.6399 22 6 8.0259 -10.5144 -1.7327 23 6 7.4584 -7.8202 -0.6727 24 6 6.7658 -6.6313 -0.6729 25 6 4.3618 -2.4477 0.7226 26 6 3.5974 -1.1224 0.7220 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5137 -0.8900 30 1 1.5632 -1.8780 -1.9555 31 1 3.1046 -0.9879 -1.9558 32 1 3.4622 -3.3876 -2.4687 33 1 2.6906 -3.8319 -0.9271 34 1 5.2865 -4.7543 0.0447 35 1 7.7103 -5.4677 -3.7236 36 1 9.0127 -8.7395 -4.3013 37 1 11.1806 -7.7449 -4.4262 38 1 9.0012 -5.1881 -5.1589 39 1 9.5742 -7.0001 -6.6778 40 1 9.3469 -9.3361 0.2995 41 1 10.4260 -10.3760 -0.6613 42 1 10.6061 -8.6065 -0.7253 43 1 7.3829 -10.4866 -2.6125 44 1 8.5988 -11.4417 -1.7311 45 1 7.4128 -10.4641 -0.8329 46 1 7.3902 -8.4841 0.1764 47 1 6.1537 -6.3622 0.1751 48 1 3.7724 -3.2070 1.2366 49 1 5.3143 -2.3171 1.2364 50 1 3.4160 -0.8071 1.7496 51 1 4.1868 -0.3632 0.2080 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13287736_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:21:19 Heat of formation + Delta-G solvation = -68.495271 kcal Electronic energy + Delta-G solvation = -30849.247133 eV Core-core repulsion = 26715.137424 eV Total energy + Delta-G solvation = -4134.109709 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.193 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.72602 -41.12761 -40.30692 -38.57523 -37.76368 -37.19604 -35.31750 -33.06427 -32.16148 -31.81323 -31.19291 -29.80864 -28.62095 -26.87883 -26.22347 -24.33209 -23.90381 -22.99926 -22.70481 -21.43716 -20.91809 -20.29305 -18.86384 -18.38905 -17.77772 -17.62540 -17.09813 -16.62830 -16.49227 -16.24319 -16.00563 -15.98856 -15.81584 -15.52419 -15.17673 -15.06703 -14.97194 -14.71330 -14.60739 -14.31947 -14.00433 -13.72830 -13.65822 -13.56363 -13.45892 -13.32391 -13.30460 -13.08599 -12.95178 -12.74907 -12.69519 -12.67759 -12.34512 -12.24627 -12.06258 -11.67163 -11.61850 -11.38903 -10.93368 -10.42462 -10.30686 -10.11973 -10.07743 -9.75118 -9.55335 -4.88162 -0.31072 0.17990 0.97556 1.36378 1.66883 1.76426 2.04516 2.06291 2.68303 2.76013 2.98530 3.38055 3.51113 3.54915 3.65675 3.75106 3.77924 3.87381 3.97987 4.04524 4.07266 4.10615 4.18365 4.24073 4.25383 4.27366 4.32208 4.37005 4.43370 4.44030 4.44939 4.48943 4.50229 4.58869 4.65443 4.69546 4.78424 4.84398 4.90286 4.93133 4.93154 4.95090 5.05708 5.07103 5.09512 5.15148 5.19683 5.27501 5.28426 5.45947 5.59329 5.78037 6.25973 6.45703 6.53831 6.58460 7.21067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.359 3.641 3 O -0.455 6.455 4 C -0.139 4.139 5 H 0.098 0.902 6 C -0.103 4.103 7 C -0.126 4.126 8 C 0.143 3.857 9 H 0.092 0.908 10 N -0.724 5.724 11 C 0.561 3.439 12 O -0.530 6.530 13 C -0.137 4.137 14 C -0.051 4.051 15 C -0.059 4.059 16 C -0.052 4.052 17 O -0.528 6.528 18 Si 0.666 3.334 19 C 0.142 3.858 20 N -0.509 5.509 21 C 0.030 3.970 22 C 0.025 3.975 23 C -0.159 4.159 24 C -0.069 4.069 25 C -0.125 4.125 26 C -0.105 4.105 27 H 0.082 0.918 28 H 0.093 0.907 29 H 0.092 0.908 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.075 0.925 33 H 0.068 0.932 34 H 0.399 0.601 35 H 0.145 0.855 36 H 0.082 0.918 37 H 0.377 0.623 38 H -0.252 1.252 39 H -0.258 1.258 40 H 0.031 0.969 41 H 0.075 0.925 42 H 0.074 0.926 43 H 0.073 0.927 44 H 0.076 0.924 45 H 0.032 0.968 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.071 0.929 49 H 0.074 0.926 50 H 0.071 0.929 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.477 -6.664 3.063 8.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.263 4.263 2 C 0.234 3.766 3 O -0.328 6.328 4 C -0.158 4.158 5 H 0.116 0.884 6 C -0.142 4.142 7 C -0.165 4.165 8 C 0.039 3.961 9 H 0.110 0.890 10 N -0.375 5.375 11 C 0.349 3.651 12 O -0.407 6.407 13 C -0.140 4.140 14 C -0.070 4.070 15 C -0.060 4.060 16 C -0.163 4.163 17 O -0.334 6.334 18 Si 0.568 3.432 19 C 0.048 3.952 20 N -0.229 5.229 21 C -0.116 4.116 22 C -0.122 4.122 23 C -0.179 4.179 24 C -0.089 4.089 25 C -0.163 4.163 26 C -0.143 4.143 27 H 0.101 0.899 28 H 0.111 0.889 29 H 0.111 0.889 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.094 0.906 33 H 0.087 0.913 34 H 0.234 0.766 35 H 0.162 0.838 36 H 0.100 0.900 37 H 0.225 0.775 38 H -0.176 1.176 39 H -0.183 1.183 40 H 0.049 0.951 41 H 0.094 0.906 42 H 0.093 0.907 43 H 0.092 0.908 44 H 0.095 0.905 45 H 0.051 0.949 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.089 0.911 49 H 0.093 0.907 50 H 0.090 0.910 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.784 -4.837 1.922 6.435 hybrid contribution 0.556 -0.788 1.328 1.641 sum -3.228 -5.624 3.250 7.254 Atomic orbital electron populations 1.22308 0.94309 1.04733 1.04970 1.24664 0.91990 0.90025 0.69930 1.90432 1.71968 1.35143 1.35231 1.21878 0.97921 0.97230 0.98808 0.88379 1.21389 1.01150 0.97701 0.93925 1.21903 0.95444 0.97253 1.01889 1.21057 0.92711 0.85674 0.96643 0.88985 1.45973 1.48655 1.22488 1.20407 1.18160 0.78617 0.85728 0.82619 1.90818 1.63772 1.52149 1.34008 1.19823 1.02063 0.95770 0.96319 1.21183 0.93317 0.94688 0.97794 1.19127 0.97851 0.93698 0.95327 1.24501 0.83610 1.06310 1.01845 1.86577 1.14609 1.90042 1.42207 0.95270 0.91477 0.79981 0.76483 1.18798 0.92631 0.91393 0.92402 1.59396 1.17756 1.00338 1.45443 1.22453 0.95544 1.03603 0.90005 1.22516 0.95580 0.92729 1.01356 1.21608 0.98997 0.97925 0.99357 1.21139 0.97554 0.93344 0.96818 1.21807 1.01251 0.97852 0.95424 1.21393 0.94670 0.97276 1.00978 0.89942 0.88896 0.88902 0.90740 0.90932 0.90605 0.91308 0.76551 0.83806 0.90034 0.77502 1.17632 1.18335 0.95089 0.90622 0.90686 0.90838 0.90493 0.94901 0.85269 0.85415 0.91062 0.90731 0.91033 0.90431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 0.49 10.32 36.00 0.37 0.86 16 2 C 0.36 0.06 6.32 -29.04 -0.18 -0.12 16 3 O -0.45 -2.01 16.92 6.00 0.10 -1.90 16 4 C -0.14 0.24 2.40 -91.77 -0.22 0.02 16 5 H 0.10 -0.36 8.05 -51.93 -0.42 -0.78 16 6 C -0.10 0.14 5.19 -26.74 -0.14 0.00 16 7 C -0.13 0.14 5.49 -26.73 -0.15 -0.01 16 8 C 0.14 -0.07 2.45 -67.93 -0.17 -0.24 16 9 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 10 N -0.72 0.49 5.03 -54.85 -0.28 0.22 16 11 C 0.56 1.40 7.73 -12.47 -0.10 1.31 16 12 O -0.53 -3.31 16.00 5.28 0.08 -3.23 16 13 C -0.14 -0.21 5.88 -104.95 -0.62 -0.82 16 14 C -0.05 -0.13 8.19 -39.23 -0.32 -0.45 16 15 C -0.06 -0.11 5.31 -104.49 -0.55 -0.67 16 16 C -0.05 -0.05 2.32 36.01 0.08 0.03 16 17 O -0.53 -1.07 12.86 -35.23 -0.45 -1.52 16 18 Si 0.67 0.52 30.19 -169.99 -5.13 -4.61 16 19 C 0.14 0.15 4.70 -83.86 -0.39 -0.24 16 20 N -0.51 -0.20 4.20 -186.86 -0.78 -0.98 16 21 C 0.03 -0.01 9.34 60.07 0.56 0.55 16 22 C 0.02 -0.04 9.38 60.06 0.56 0.53 16 23 C -0.16 0.06 8.53 -39.45 -0.34 -0.27 16 24 C -0.07 0.06 9.53 -39.23 -0.37 -0.31 16 25 C -0.13 0.28 5.39 -26.73 -0.14 0.14 16 26 C -0.11 0.10 4.80 -26.73 -0.13 -0.02 16 27 H 0.08 -0.36 7.94 -51.93 -0.41 -0.77 16 28 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 30 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 33 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.40 -1.36 6.62 -40.82 -0.27 -1.63 16 35 H 0.14 0.46 4.46 -52.48 -0.23 0.23 16 36 H 0.08 0.00 7.77 -51.93 -0.40 -0.41 16 37 H 0.38 -0.63 8.74 45.56 0.40 -0.24 16 38 H -0.25 -1.10 6.75 56.52 0.38 -0.72 16 39 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 40 H 0.03 -0.04 7.10 -51.93 -0.37 -0.40 16 41 H 0.08 -0.10 8.12 -51.92 -0.42 -0.52 16 42 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 43 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.08 -0.17 8.12 -51.93 -0.42 -0.59 16 45 H 0.03 -0.07 7.32 -51.93 -0.38 -0.45 16 46 H 0.13 -0.26 6.99 -52.48 -0.37 -0.62 16 47 H 0.13 -0.50 6.39 -52.49 -0.34 -0.83 16 48 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 49 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 50 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 51 H 0.08 0.07 7.86 -51.93 -0.41 -0.34 16 LS Contribution 404.93 15.07 6.10 6.10 Total: 0.00 -9.14 404.93 -10.90 -20.04 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -8.30 Total: -14.39 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -2.24 Total: 0.28 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -1.06 Total: -0.77 kcal Atomic # 8 Polarization: -6.39 SS G_CDS: -0.27 Total: -6.65 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: -5.13 Total: -4.61 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.14 -10.90 -20.04 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13287736_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.454 kcal (2) G-P(sol) polarization free energy of solvation -9.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.902 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.041 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds