Wall clock time and date at job start Sat Mar 6 2021 21:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35991 * 117.00760 * 2 1 4 4 C 1.38559 * 120.06152 * 0.26823 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.29932 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38379 * 120.13186 * 0.25434 * 9 5 4 11 11 Cl 1.73600 * 120.01311 * 180.02562 * 10 9 5 12 12 C 1.38626 * 119.97583 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07396 * 180.02562 * 12 10 9 14 14 C 1.42895 * 117.00069 * 90.00537 * 13 12 10 15 15 C 1.52999 * 109.47196 * 269.99970 * 14 13 12 16 16 C 1.50696 * 109.47517 * 149.99866 * 14 13 12 17 17 O 1.21280 * 119.99926 * 4.99986 * 16 14 13 18 18 N 1.34775 * 120.00227 * 184.99977 * 16 14 13 19 19 C 1.46506 * 120.00252 * 179.97438 * 18 16 14 20 20 H 1.09004 * 109.46930 * 34.99977 * 19 18 16 21 21 C 1.52996 * 109.47051 * 154.99760 * 19 18 16 22 22 C 1.53006 * 109.46790 * 180.02562 * 21 19 18 23 23 C 1.52999 * 109.47135 * 300.00325 * 22 21 19 24 24 H 1.09004 * 109.47073 * 299.99963 * 23 22 21 25 25 C 1.50705 * 109.46896 * 180.02562 * 23 22 21 26 26 C 1.50695 * 120.00153 * 155.00165 * 25 23 22 27 27 O 1.20760 * 119.99915 * 334.99912 * 25 23 22 28 28 C 1.52996 * 109.47547 * 60.00138 * 23 22 21 29 29 C 1.52999 * 109.47055 * 275.00197 * 19 18 16 30 30 H 1.08996 * 109.47580 * 300.01068 * 1 2 3 31 31 H 1.09002 * 109.46953 * 60.00363 * 1 2 3 32 32 H 1.08996 * 109.47786 * 180.02562 * 1 2 3 33 33 H 1.08003 * 119.99236 * 0.02562 * 4 3 2 34 34 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 35 35 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 36 36 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 37 37 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 38 38 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 39 39 H 1.09001 * 109.47359 * 29.99829 * 14 13 12 40 40 H 1.09000 * 109.47122 * 59.99905 * 15 14 13 41 41 H 1.08997 * 109.47477 * 179.97438 * 15 14 13 42 42 H 1.09003 * 109.47302 * 299.99908 * 15 14 13 43 43 H 0.97002 * 120.00470 * 0.02562 * 18 16 14 44 44 H 1.08995 * 109.47456 * 300.00027 * 21 19 18 45 45 H 1.09002 * 109.47301 * 60.00796 * 21 19 18 46 46 H 1.08993 * 109.47270 * 60.00744 * 22 21 19 47 47 H 1.09004 * 109.46567 * 180.02562 * 22 21 19 48 48 H 1.08999 * 109.47537 * 89.99465 * 26 25 23 49 49 H 1.09003 * 109.47382 * 210.00118 * 26 25 23 50 50 H 1.09004 * 109.47193 * 329.99773 * 26 25 23 51 51 H 1.09000 * 109.46826 * 59.99109 * 28 23 22 52 52 H 1.08990 * 109.47729 * 179.97438 * 28 23 22 53 53 H 1.08994 * 109.46958 * 299.99757 * 29 19 18 54 54 H 1.08996 * 109.47389 * 60.00070 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0056 5 6 1.9221 3.6061 -0.0006 6 6 1.1007 4.8696 -0.0008 7 8 0.2760 4.9014 -1.1673 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0010 10 6 4.0606 2.5236 -0.0005 11 17 5.7939 2.6212 -0.0003 12 6 3.4359 1.2860 -0.0001 13 8 4.1795 0.1471 0.0010 14 6 4.5334 -0.3954 1.2747 15 6 5.8676 0.1995 1.7296 16 6 4.6627 -1.8928 1.1647 17 8 4.5603 -2.4325 0.0834 18 7 4.8921 -2.6323 2.2678 19 6 5.0172 -4.0881 2.1609 20 1 5.5051 -4.3427 1.2200 21 6 5.8541 -4.6151 3.3283 22 6 5.9852 -6.1354 3.2162 23 6 4.5944 -6.7717 3.2574 24 1 4.1063 -6.5175 4.1983 25 6 4.7237 -8.2692 3.1477 26 6 3.6454 -9.1615 3.7063 27 8 5.6913 -8.7541 2.6121 28 6 3.7576 -6.2447 2.0901 29 6 3.6262 -4.7239 2.2025 30 1 -0.3634 0.5140 0.8898 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 0.2147 2.3192 0.0104 34 1 0.4721 4.8944 0.8893 35 1 0.7696 4.8819 -1.9987 36 1 1.4370 7.6000 -0.0023 37 1 3.1198 6.3093 1.1903 38 1 3.7896 4.6446 -0.0015 39 1 3.7595 -0.1501 2.0019 40 1 5.7741 1.2826 1.8093 41 1 6.1374 -0.2139 2.7013 42 1 6.6417 -0.0458 1.0024 43 1 4.9737 -2.2008 3.1327 44 1 6.8450 -4.1622 3.2986 45 1 5.3661 -4.3606 4.2692 46 1 6.4734 -6.3897 2.2755 47 1 6.5810 -6.5109 4.0482 48 1 2.8971 -9.3526 2.9371 49 1 4.0854 -10.1056 4.0277 50 1 3.1737 -8.6719 4.5583 51 1 4.2458 -6.4988 1.1492 52 1 2.7670 -6.6983 2.1191 53 1 3.1384 -4.4693 3.1433 54 1 3.0301 -4.3485 1.3708 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13287736_13428712.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:21:21 Heat of formation + Delta-G solvation = -157.561022 kcal Electronic energy + Delta-G solvation = -38117.458265 eV Core-core repulsion = 33047.748110 eV Total energy + Delta-G solvation = -5069.710155 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.158 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.01827 -41.40637 -40.74527 -39.44824 -39.15949 -38.42382 -37.76149 -36.90797 -35.40764 -33.40211 -32.09735 -31.72192 -31.40437 -31.24555 -29.71051 -28.58658 -26.81288 -25.65882 -24.03738 -23.82244 -23.69553 -22.73957 -21.58154 -21.29523 -20.28508 -19.66513 -18.81739 -18.64556 -18.32472 -17.55583 -17.36166 -17.11003 -16.89395 -16.61805 -16.32834 -16.26919 -16.01491 -16.00206 -15.93226 -15.73435 -15.60838 -15.11017 -14.96858 -14.71969 -14.48813 -14.31120 -14.26769 -14.14898 -13.84023 -13.66647 -13.50389 -13.32469 -13.27396 -13.21376 -12.99477 -12.82424 -12.70895 -12.65882 -12.60635 -12.31890 -12.29508 -12.18470 -12.06550 -11.87395 -11.70801 -11.54821 -11.37459 -11.34466 -10.78722 -10.52718 -10.44507 -10.14383 -9.84777 -9.44356 -4.99136 -0.35528 -0.04213 0.83074 0.96438 1.25734 1.47482 1.60920 1.63687 1.94674 2.15910 2.19807 2.66638 3.07096 3.32863 3.52496 3.55220 3.61829 3.62896 3.72224 3.78160 3.82120 3.92600 3.96552 3.99336 4.03373 4.06809 4.14050 4.25980 4.29602 4.30133 4.32008 4.41802 4.43286 4.44663 4.56092 4.61687 4.64184 4.65982 4.66376 4.68010 4.69122 4.80606 4.82382 4.97181 5.00843 5.07223 5.07842 5.10540 5.11941 5.21018 5.21660 5.25826 5.31545 5.45428 5.89665 6.30532 6.48805 6.55466 6.71196 7.15414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.322 6.322 3 C 0.119 3.881 4 C -0.164 4.164 5 C -0.063 4.063 6 C -0.066 4.066 7 O -0.550 6.550 8 Si 0.759 3.241 9 C -0.133 4.133 10 C -0.017 4.017 11 Cl -0.038 7.038 12 C 0.053 3.947 13 O -0.310 6.310 14 C 0.077 3.923 15 C -0.176 4.176 16 C 0.518 3.482 17 O -0.565 6.565 18 N -0.707 5.707 19 C 0.144 3.856 20 H 0.055 0.945 21 C -0.113 4.113 22 C -0.106 4.106 23 C -0.134 4.134 24 H 0.134 0.866 25 C 0.358 3.642 26 C -0.205 4.205 27 O -0.507 6.507 28 C -0.100 4.100 29 C -0.119 4.119 30 H 0.074 0.926 31 H 0.068 0.932 32 H 0.113 0.887 33 H 0.158 0.842 34 H 0.123 0.877 35 H 0.397 0.603 36 H -0.293 1.293 37 H -0.277 1.277 38 H 0.160 0.840 39 H 0.105 0.895 40 H 0.083 0.917 41 H 0.102 0.898 42 H 0.058 0.942 43 H 0.418 0.582 44 H 0.076 0.924 45 H 0.101 0.899 46 H 0.046 0.954 47 H 0.075 0.925 48 H 0.107 0.893 49 H 0.077 0.923 50 H 0.114 0.886 51 H 0.044 0.956 52 H 0.091 0.909 53 H 0.094 0.906 54 H 0.048 0.952 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.809 3.712 7.600 9.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.236 6.236 3 C 0.072 3.928 4 C -0.183 4.183 5 C -0.064 4.064 6 C -0.177 4.177 7 O -0.358 6.358 8 Si 0.664 3.336 9 C -0.151 4.151 10 C -0.045 4.045 11 Cl -0.009 7.009 12 C 0.007 3.993 13 O -0.226 6.226 14 C 0.018 3.982 15 C -0.233 4.233 16 C 0.304 3.696 17 O -0.443 6.443 18 N -0.360 5.360 19 C 0.040 3.960 20 H 0.073 0.927 21 C -0.151 4.151 22 C -0.144 4.144 23 C -0.153 4.153 24 H 0.152 0.848 25 C 0.236 3.764 26 C -0.262 4.262 27 O -0.384 6.384 28 C -0.138 4.138 29 C -0.158 4.158 30 H 0.092 0.908 31 H 0.086 0.914 32 H 0.132 0.868 33 H 0.176 0.824 34 H 0.140 0.860 35 H 0.247 0.753 36 H -0.220 1.220 37 H -0.204 1.204 38 H 0.177 0.823 39 H 0.122 0.878 40 H 0.101 0.899 41 H 0.120 0.880 42 H 0.077 0.923 43 H 0.255 0.745 44 H 0.094 0.906 45 H 0.119 0.881 46 H 0.065 0.935 47 H 0.094 0.906 48 H 0.125 0.875 49 H 0.096 0.904 50 H 0.133 0.867 51 H 0.063 0.937 52 H 0.110 0.890 53 H 0.113 0.887 54 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -4.279 3.504 7.247 9.117 hybrid contribution -0.232 -0.325 0.305 0.503 sum -4.511 3.179 7.552 9.354 Atomic orbital electron populations 1.23427 0.75933 1.05677 1.02795 1.86213 1.23661 1.25778 1.87900 1.19363 0.90847 0.85989 0.96612 1.21289 1.01587 0.90129 1.05257 1.20228 0.92787 0.95919 0.97436 1.25137 0.99719 1.00807 0.92013 1.86487 1.36272 1.96749 1.16252 0.93665 0.78726 0.73798 0.87384 1.20923 0.92881 0.97340 1.03968 1.20989 0.86187 0.93208 1.04072 1.98393 1.07956 1.98312 1.96200 1.17841 0.87077 0.85658 1.08689 1.86249 1.69887 1.38227 1.28211 1.22307 0.99977 0.90154 0.85776 1.22570 0.94538 1.03301 1.02884 1.20570 0.75698 0.89041 0.84315 1.90735 1.50198 1.74079 1.29272 1.45808 1.72945 1.07291 1.09985 1.21011 0.96682 0.78588 0.99729 0.92695 1.21730 1.00511 0.94770 0.98048 1.21371 0.95870 0.94795 1.02413 1.21900 0.98240 0.92419 1.02702 0.84800 1.25279 0.85196 0.93025 0.72856 1.22373 0.98994 1.00441 1.04354 1.90425 1.33155 1.79110 1.35667 1.21359 1.00606 0.95395 0.96450 1.21835 0.96334 0.94453 1.03147 0.90780 0.91364 0.86829 0.82423 0.85962 0.75254 1.22021 1.20378 0.82292 0.87752 0.89863 0.87971 0.92259 0.74456 0.90561 0.88073 0.93495 0.90632 0.87487 0.90372 0.86701 0.93740 0.89000 0.88724 0.93339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.32 -1.79 10.28 -79.59 -0.82 -2.61 16 3 C 0.12 0.51 6.70 22.56 0.15 0.66 16 4 C -0.16 0.09 8.60 22.36 0.19 0.28 16 5 C -0.06 0.14 5.39 -19.86 -0.11 0.04 16 6 C -0.07 0.28 2.82 71.24 0.20 0.48 16 7 O -0.55 1.90 12.77 -148.98 -1.90 0.00 16 8 Si 0.76 -3.49 29.78 68.60 2.04 -1.45 16 9 C -0.13 0.18 8.45 22.30 0.19 0.37 16 10 C -0.02 -0.05 6.24 22.40 0.14 0.09 16 11 Cl -0.04 -0.10 24.90 -2.72 -0.07 -0.17 16 12 C 0.05 0.33 5.56 22.58 0.13 0.46 16 13 O -0.31 -3.17 8.55 -67.43 -0.58 -3.74 16 14 C 0.08 0.27 3.19 29.85 0.10 0.37 16 15 C -0.18 0.16 8.35 71.98 0.60 0.76 16 16 C 0.52 3.63 7.14 87.66 0.63 4.26 16 17 O -0.57 -10.24 16.17 15.96 0.26 -9.98 16 18 N -0.71 0.94 5.04 -442.53 -2.23 -1.29 16 19 C 0.14 0.01 2.45 44.99 0.11 0.12 16 20 H 0.05 0.43 7.58 -2.38 -0.02 0.41 16 21 C -0.11 0.58 5.39 30.60 0.16 0.75 16 22 C -0.11 0.14 4.74 30.60 0.14 0.28 16 23 C -0.13 0.53 2.45 -11.54 -0.03 0.50 16 24 H 0.13 -1.41 8.10 -2.38 -0.02 -1.43 16 25 C 0.36 0.30 6.38 29.10 0.19 0.48 16 26 C -0.20 1.16 10.25 71.23 0.73 1.89 16 27 O -0.51 -5.58 16.84 -1.45 -0.02 -5.60 16 28 C -0.10 0.21 5.19 30.61 0.16 0.37 16 29 C -0.12 0.18 5.50 30.61 0.17 0.35 16 30 H 0.07 -0.49 7.65 -2.39 -0.02 -0.50 16 31 H 0.07 -0.31 7.68 -2.39 -0.02 -0.33 16 32 H 0.11 -0.59 8.14 -2.39 -0.02 -0.61 16 33 H 0.16 -0.57 6.30 -2.91 -0.02 -0.59 16 34 H 0.12 -0.58 7.96 -2.39 -0.02 -0.60 16 35 H 0.40 -4.21 8.70 -74.05 -0.64 -4.86 16 36 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 37 H -0.28 0.12 7.11 99.48 0.71 0.83 16 38 H 0.16 -0.83 4.86 -2.91 -0.01 -0.85 16 39 H 0.10 -0.08 7.91 -2.39 -0.02 -0.10 16 40 H 0.08 -0.09 5.45 -2.39 -0.01 -0.10 16 41 H 0.10 -0.75 7.93 -2.39 -0.02 -0.77 16 42 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.42 -3.71 8.39 -92.71 -0.78 -4.48 16 44 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 45 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 46 H 0.05 0.23 7.87 -2.39 -0.02 0.21 16 47 H 0.08 -0.14 8.14 -2.38 -0.02 -0.16 16 48 H 0.11 -0.79 8.14 -2.39 -0.02 -0.80 16 49 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 50 H 0.11 -1.31 8.08 -2.39 -0.02 -1.33 16 51 H 0.04 0.16 8.14 -2.39 -0.02 0.14 16 52 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 53 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 54 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 Total: 0.00 -31.07 447.15 1.21 -29.87 By element: Atomic # 1 Polarization: -18.16 SS G_CDS: -0.44 Total: -18.60 kcal Atomic # 6 Polarization: 8.61 SS G_CDS: 4.96 Total: 13.57 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -2.23 Total: -1.29 kcal Atomic # 8 Polarization: -18.87 SS G_CDS: -3.06 Total: -21.93 kcal Atomic # 14 Polarization: -3.49 SS G_CDS: 2.04 Total: -1.45 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.17 kcal Total: -31.07 1.21 -29.87 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13287736_13428712.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.694 kcal (2) G-P(sol) polarization free energy of solvation -31.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds