Wall clock time and date at job start Sat Mar 6 2021 21:21:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 O 1.20751 * 120.00136 * 2 1 4 4 C 1.50699 * 120.00057 * 180.02562 * 2 1 3 5 5 H 1.09009 * 109.47152 * 329.99624 * 4 2 1 6 6 C 1.52993 * 109.47567 * 89.99536 * 4 2 1 7 7 C 1.53000 * 109.47512 * 180.02562 * 6 4 2 8 8 C 1.52995 * 109.46898 * 299.99835 * 7 6 4 9 9 H 1.09002 * 109.47544 * 299.99985 * 8 7 6 10 10 N 1.46499 * 109.47258 * 179.97438 * 8 7 6 11 11 C 1.34784 * 119.99893 * 85.00288 * 10 8 7 12 12 O 1.21283 * 119.99649 * 0.02562 * 11 10 8 13 13 C 1.50697 * 119.99774 * 179.72962 * 11 10 8 14 14 C 1.53543 * 109.82610 * 80.00093 * 13 11 10 15 15 C 1.53037 * 108.56323 * 180.48775 * 14 13 11 16 16 C 1.50209 * 110.31525 * 310.42569 * 15 14 13 17 17 C 1.50697 * 118.54543 * 200.07758 * 16 15 14 18 18 O 1.42902 * 109.47086 * 299.99784 * 17 16 15 19 19 Si 1.86303 * 109.46884 * 180.02562 * 17 16 15 20 20 C 1.31113 * 122.90620 * 20.05378 * 16 15 14 21 21 N 1.38922 * 121.84945 * 359.59149 * 20 16 15 22 22 C 1.53004 * 109.46864 * 60.00173 * 8 7 6 23 23 C 1.52997 * 109.47185 * 210.00045 * 4 2 1 24 24 H 1.08999 * 109.47370 * 239.99770 * 1 2 3 25 25 H 1.09001 * 109.47238 * 359.97438 * 1 2 3 26 26 H 1.09003 * 109.47252 * 119.99637 * 1 2 3 27 27 H 1.09008 * 109.47625 * 300.00234 * 6 4 2 28 28 H 1.08997 * 109.47189 * 59.99979 * 6 4 2 29 29 H 1.09003 * 109.47050 * 180.02562 * 7 6 4 30 30 H 1.09002 * 109.47010 * 60.00146 * 7 6 4 31 31 H 0.97005 * 120.00261 * 265.00500 * 10 8 7 32 32 H 1.08998 * 109.81322 * 319.13103 * 13 11 10 33 33 H 1.08997 * 109.61708 * 300.20620 * 14 13 11 34 34 H 1.08999 * 109.61710 * 60.76156 * 14 13 11 35 35 H 1.08997 * 109.33152 * 70.68374 * 15 14 13 36 36 H 1.08996 * 109.33074 * 190.17055 * 15 14 13 37 37 H 1.08991 * 109.47488 * 59.99590 * 17 16 15 38 38 H 0.96704 * 114.00201 * 300.00486 * 18 17 16 39 39 H 1.48497 * 110.00166 * 58.68146 * 19 17 16 40 40 H 1.48508 * 109.99561 * 179.97438 * 19 17 16 41 41 H 1.08000 * 119.07784 * 179.61975 * 20 16 15 42 42 H 0.96999 * 120.56098 * 193.33438 * 21 20 16 43 43 H 1.08997 * 109.47519 * 59.99913 * 22 8 7 44 44 H 1.09009 * 109.47062 * 179.97438 * 22 8 7 45 45 H 1.08994 * 109.47626 * 59.99799 * 23 4 2 46 46 H 1.09002 * 109.47045 * 299.99582 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0457 0.0000 4 6 2.2605 -1.3051 -0.0006 5 1 1.6714 -2.0650 0.5130 6 6 2.5154 -1.7462 -1.4432 7 6 3.2799 -3.0716 -1.4438 8 6 4.6168 -2.8895 -0.7224 9 1 5.2062 -2.1298 -1.2358 10 7 5.3485 -4.1586 -0.7224 11 6 6.1127 -4.4959 -1.7802 12 8 6.1948 -3.7485 -2.7318 13 6 6.8702 -5.7986 -1.7775 14 6 5.9256 -6.9512 -2.1474 15 6 6.7201 -8.2589 -2.1241 16 6 7.9887 -8.1125 -2.9149 17 6 8.6792 -9.3588 -3.4058 18 8 9.0382 -10.1756 -2.2895 19 14 10.2151 -8.8873 -4.3489 20 6 8.5217 -6.9484 -3.1974 21 7 7.9385 -5.7562 -2.7870 22 6 4.3618 -2.4484 0.7203 23 6 3.5973 -1.1225 0.7207 24 1 -0.3634 -0.5139 0.8899 25 1 -0.3634 1.0277 0.0005 26 1 -0.3634 -0.5138 -0.8900 27 1 1.5630 -1.8764 -1.9572 28 1 3.1045 -0.9864 -1.9568 29 1 3.4619 -3.3856 -2.4716 30 1 2.6904 -3.8312 -0.9303 31 1 5.2831 -4.7562 0.0389 32 1 7.2994 -5.9745 -0.7911 33 1 5.1121 -7.0042 -1.4238 34 1 5.5208 -6.7864 -3.1459 35 1 6.9651 -8.5140 -1.0931 36 1 6.1155 -9.0561 -2.5564 37 1 8.0065 -9.9132 -4.0601 38 1 9.6369 -9.7453 -1.6637 39 1 11.1264 -8.1038 -3.4765 40 1 10.9056 -10.1078 -4.8379 41 1 9.4396 -6.9153 -3.7655 42 1 8.2309 -4.9099 -3.1602 43 1 3.7724 -3.2080 1.2338 44 1 5.3143 -2.3190 1.2345 45 1 3.4158 -0.8083 1.7485 46 1 4.1865 -0.3626 0.2072 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13287736_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:21:33 Heat of formation + Delta-G solvation = -98.122932 kcal Electronic energy + Delta-G solvation = -25965.420556 eV Core-core repulsion = 22242.015996 eV Total energy + Delta-G solvation = -3723.404561 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.67129 -40.94240 -39.73026 -38.54607 -37.39642 -35.39486 -33.24003 -33.20267 -32.17411 -31.70016 -30.07283 -27.47422 -25.45506 -24.48103 -23.97692 -23.52928 -21.63938 -21.45383 -20.36081 -19.39609 -19.16105 -18.06293 -17.58515 -17.11188 -16.86393 -16.43978 -16.34166 -16.02696 -16.01929 -15.78486 -15.30663 -15.23574 -15.06966 -14.81041 -14.52760 -14.34149 -14.13689 -13.92615 -13.64444 -13.50970 -13.35571 -13.10904 -13.01779 -12.90196 -12.71974 -12.42235 -12.32054 -12.28534 -12.00831 -11.69443 -11.64513 -11.46695 -11.30947 -10.87466 -10.47714 -10.29260 -10.20242 -8.49329 -4.89233 0.94007 1.28676 1.42424 1.48697 1.62787 1.80331 2.04716 2.57425 2.94354 3.38664 3.47016 3.49917 3.54376 3.70626 3.79917 3.81137 3.92233 3.93543 4.00047 4.13677 4.16850 4.22722 4.25535 4.30228 4.34155 4.37472 4.44175 4.51678 4.56270 4.62461 4.67217 4.74867 4.82575 4.86932 4.89354 4.95224 4.99646 5.05969 5.09665 5.16220 5.19567 5.25644 5.34926 5.52018 6.17311 6.35186 6.49896 6.58845 6.80002 7.04252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.358 3.642 3 O -0.453 6.453 4 C -0.139 4.139 5 H 0.098 0.902 6 C -0.104 4.104 7 C -0.126 4.126 8 C 0.143 3.857 9 H 0.091 0.909 10 N -0.723 5.723 11 C 0.513 3.487 12 O -0.528 6.528 13 C 0.136 3.864 14 C -0.126 4.126 15 C -0.050 4.050 16 C -0.279 4.279 17 C -0.049 4.049 18 O -0.536 6.536 19 Si 0.665 3.335 20 C 0.144 3.856 21 N -0.732 5.732 22 C -0.125 4.125 23 C -0.105 4.105 24 H 0.093 0.907 25 H 0.082 0.918 26 H 0.093 0.907 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.073 0.927 30 H 0.069 0.931 31 H 0.402 0.598 32 H 0.089 0.911 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.065 0.935 36 H 0.075 0.925 37 H 0.109 0.891 38 H 0.372 0.628 39 H -0.264 1.264 40 H -0.260 1.260 41 H 0.133 0.867 42 H 0.410 0.590 43 H 0.072 0.928 44 H 0.074 0.926 45 H 0.072 0.928 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.596 -1.327 2.514 4.584 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.264 4.264 2 C 0.233 3.767 3 O -0.326 6.326 4 C -0.158 4.158 5 H 0.116 0.884 6 C -0.142 4.142 7 C -0.165 4.165 8 C 0.039 3.961 9 H 0.109 0.891 10 N -0.375 5.375 11 C 0.298 3.702 12 O -0.404 6.404 13 C 0.027 3.973 14 C -0.165 4.165 15 C -0.087 4.087 16 C -0.290 4.290 17 C -0.160 4.160 18 O -0.342 6.342 19 Si 0.567 3.433 20 C 0.023 3.977 21 N -0.365 5.365 22 C -0.163 4.163 23 C -0.143 4.143 24 H 0.111 0.889 25 H 0.101 0.899 26 H 0.112 0.888 27 H 0.092 0.908 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.087 0.913 31 H 0.237 0.763 32 H 0.107 0.893 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.084 0.916 36 H 0.093 0.907 37 H 0.127 0.873 38 H 0.219 0.781 39 H -0.189 1.189 40 H -0.186 1.186 41 H 0.150 0.850 42 H 0.247 0.753 43 H 0.090 0.910 44 H 0.093 0.907 45 H 0.090 0.910 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.802 -0.717 1.558 3.285 hybrid contribution 0.147 -0.297 1.448 1.486 sum -2.654 -1.014 3.006 4.137 Atomic orbital electron populations 1.22362 0.94245 1.05201 1.04616 1.24644 0.92038 0.89989 0.70079 1.90431 1.72065 1.35076 1.35021 1.21833 0.97923 0.97327 0.98751 0.88368 1.21399 1.01153 0.97644 0.93989 1.21898 0.95497 0.97349 1.01735 1.21061 0.92680 0.85613 0.96720 0.89089 1.46027 1.48634 1.22344 1.20450 1.20609 0.79373 0.87607 0.82574 1.90743 1.63394 1.52187 1.34029 1.20996 0.89463 0.92991 0.93898 1.21872 0.97192 0.94175 1.03248 1.19898 0.93237 0.96130 0.99445 1.20910 1.01338 0.93676 1.13058 1.24708 1.06221 0.92549 0.92538 1.86569 1.68231 1.43335 1.36075 0.95481 0.78035 0.82784 0.86974 1.20359 0.95366 0.85665 0.96313 1.44282 1.39411 1.07238 1.45532 1.21812 1.01292 0.97892 0.95305 1.21400 0.94647 0.97241 1.01029 0.88860 0.89903 0.88826 0.90771 0.90960 0.90791 0.91252 0.76343 0.89323 0.90367 0.90383 0.91636 0.90676 0.87282 0.78112 1.18921 1.18563 0.84997 0.75338 0.90980 0.90721 0.90975 0.90443 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 0.56 10.24 36.01 0.37 0.93 16 2 C 0.36 -0.08 6.32 -29.04 -0.18 -0.27 16 3 O -0.45 -1.82 16.90 6.01 0.10 -1.72 16 4 C -0.14 0.32 2.46 -91.78 -0.23 0.09 16 5 H 0.10 -0.41 8.12 -51.92 -0.42 -0.84 16 6 C -0.10 0.20 5.18 -26.73 -0.14 0.06 16 7 C -0.13 0.24 5.49 -26.73 -0.15 0.10 16 8 C 0.14 -0.25 2.45 -67.93 -0.17 -0.41 16 9 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 10 N -0.72 1.79 5.08 -53.81 -0.27 1.51 16 11 C 0.51 0.00 7.06 -10.98 -0.08 -0.07 16 12 O -0.53 -2.05 15.72 5.56 0.09 -1.96 16 13 C 0.14 -0.17 3.36 -68.51 -0.23 -0.40 16 14 C -0.13 0.21 5.47 -26.43 -0.14 0.06 16 15 C -0.05 0.04 5.75 -28.10 -0.16 -0.12 16 16 C -0.28 0.06 5.44 -101.34 -0.55 -0.49 16 17 C -0.05 -0.01 2.83 36.00 0.10 0.10 16 18 O -0.54 -0.86 12.78 -35.23 -0.45 -1.31 16 19 Si 0.66 -0.26 29.68 -169.99 -5.05 -5.31 16 20 C 0.14 -0.07 9.63 -16.08 -0.15 -0.23 16 21 N -0.73 0.17 5.47 -55.34 -0.30 -0.14 16 22 C -0.13 0.39 5.39 -26.70 -0.14 0.25 16 23 C -0.11 0.18 4.80 -26.71 -0.13 0.05 16 24 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 25 H 0.08 -0.14 8.12 -51.93 -0.42 -0.56 16 26 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 27 H 0.07 -0.22 8.14 -51.92 -0.42 -0.64 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.40 -2.03 8.60 -40.82 -0.35 -2.38 16 32 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 38 H 0.37 -0.44 8.70 45.56 0.40 -0.05 16 39 H -0.26 -0.40 7.10 56.52 0.40 0.00 16 40 H -0.26 -0.85 7.11 56.52 0.40 -0.44 16 41 H 0.13 -0.24 4.36 -52.49 -0.23 -0.47 16 42 H 0.41 0.01 8.08 -40.82 -0.33 -0.32 16 43 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.07 -0.22 8.14 -51.92 -0.42 -0.65 16 45 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.08 0.02 7.86 -51.93 -0.41 -0.39 16 LS Contribution 365.10 15.07 5.50 5.50 Total: 0.00 -8.30 365.10 -10.05 -18.36 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -7.69 Total: -14.58 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -1.98 Total: -0.36 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.58 Total: 1.38 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -0.26 Total: -4.99 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.05 Total: -5.31 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.30 -10.05 -18.36 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13287736_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.766 kcal (2) G-P(sol) polarization free energy of solvation -8.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.356 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.123 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds