Wall clock time and date at job start Sat Mar 6 2021 21:21:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.20758 * 120.00250 * 2 1 4 4 C 1.50700 * 119.99622 * 180.02562 * 2 1 3 5 5 H 1.09000 * 109.47739 * 329.99725 * 4 2 1 6 6 C 1.53002 * 109.47289 * 90.00111 * 4 2 1 7 7 C 1.53004 * 109.47057 * 179.97438 * 6 4 2 8 8 C 1.52991 * 109.47138 * 299.99340 * 7 6 4 9 9 H 1.08997 * 109.47682 * 300.00443 * 8 7 6 10 10 N 1.46499 * 109.47133 * 179.97438 * 8 7 6 11 11 C 1.34777 * 120.00226 * 155.00142 * 10 8 7 12 12 O 1.21699 * 119.99691 * 355.01153 * 11 10 8 13 13 C 1.46673 * 120.00052 * 175.00890 * 11 10 8 14 14 C 1.37886 * 126.22636 * 4.88863 * 13 11 10 15 15 C 1.39874 * 107.08877 * 179.84654 * 14 13 11 16 16 Br 1.89109 * 126.07101 * 180.16110 * 15 14 13 17 17 C 1.35499 * 107.85980 * 0.42105 * 15 14 13 18 18 C 1.50697 * 125.57755 * 179.76184 * 17 15 14 19 19 O 1.42901 * 109.47429 * 125.88952 * 18 17 15 20 20 Si 1.86298 * 109.47335 * 245.88947 * 18 17 15 21 21 N 1.35606 * 108.85364 * 359.73685 * 17 15 14 22 22 C 1.46495 * 125.67859 * 179.97438 * 21 17 15 23 23 C 1.53003 * 109.46863 * 60.00673 * 8 7 6 24 24 C 1.53005 * 109.46885 * 209.99263 * 4 2 1 25 25 H 1.09008 * 109.46741 * 270.00047 * 1 2 3 26 26 H 1.08998 * 109.47218 * 29.99471 * 1 2 3 27 27 H 1.08994 * 109.47103 * 149.99987 * 1 2 3 28 28 H 1.09000 * 109.47549 * 59.99769 * 6 4 2 29 29 H 1.08997 * 109.46596 * 299.99497 * 6 4 2 30 30 H 1.09001 * 109.47000 * 179.97438 * 7 6 4 31 31 H 1.09000 * 109.46907 * 59.99649 * 7 6 4 32 32 H 0.97006 * 119.99847 * 335.00418 * 10 8 7 33 33 H 1.07999 * 126.45537 * 359.97438 * 14 13 11 34 34 H 1.08997 * 109.46829 * 5.88940 * 18 17 15 35 35 H 0.96691 * 114.00377 * 180.02562 * 19 18 17 36 36 H 1.48504 * 109.99919 * 299.47554 * 20 18 17 37 37 H 1.48506 * 109.99701 * 60.78849 * 20 18 17 38 38 H 1.09002 * 109.47163 * 266.82832 * 22 21 17 39 39 H 1.09004 * 109.47028 * 26.82590 * 22 21 17 40 40 H 1.09001 * 109.47327 * 146.81959 * 22 21 17 41 41 H 1.09000 * 109.47657 * 59.99401 * 23 8 7 42 42 H 1.09000 * 109.47355 * 179.97438 * 23 8 7 43 43 H 1.09001 * 109.46818 * 60.00343 * 24 4 2 44 44 H 1.08997 * 109.47740 * 300.00455 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1108 1.0458 0.0000 4 6 2.2604 -1.3052 -0.0006 5 1 1.6714 -2.0651 0.5129 6 6 2.5154 -1.7462 -1.4433 7 6 3.2809 -3.0710 -1.4438 8 6 4.6178 -2.8878 -0.7228 9 1 5.2065 -2.1278 -1.2364 10 7 5.3505 -4.1564 -0.7228 11 6 6.6944 -4.1585 -0.6212 12 8 7.3062 -3.1064 -0.6210 13 6 7.4196 -5.4286 -0.5109 14 6 6.8699 -6.6905 -0.5923 15 6 7.9165 -7.6055 -0.4376 16 35 7.7611 -9.4900 -0.4652 17 6 9.0605 -6.9019 -0.2588 18 6 10.4301 -7.4941 -0.0477 19 8 11.3368 -6.9528 -1.0105 20 14 11.0273 -7.0818 1.6681 21 7 8.7718 -5.5777 -0.3013 22 6 9.7380 -4.4871 -0.1488 23 6 4.3628 -2.4468 0.7199 24 6 3.5974 -1.1225 0.7206 25 1 -0.3633 0.0000 1.0278 26 1 -0.3633 0.8900 -0.5137 27 1 -0.3633 -0.8899 -0.5138 28 1 3.1045 -0.9864 -1.9568 29 1 1.5630 -1.8763 -1.9571 30 1 3.4622 -3.3855 -2.4716 31 1 2.6921 -3.8310 -0.9301 32 1 4.8683 -4.9950 -0.7959 33 1 5.8279 -6.9278 -0.7485 34 1 10.3798 -8.5766 -0.1645 35 1 12.2395 -7.2905 -0.9341 36 1 11.1124 -5.6087 1.8360 37 1 10.1032 -7.6556 2.6791 38 1 9.7779 -4.1806 0.8965 39 1 10.7237 -4.8282 -0.4653 40 1 9.4314 -3.6413 -0.7641 41 1 3.7741 -3.2068 1.2336 42 1 5.3152 -2.3167 1.2338 43 1 3.4158 -0.8083 1.7484 44 1 4.1865 -0.3627 0.2071 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13287736_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:21:55 Heat of formation + Delta-G solvation = -61.106129 kcal Electronic energy + Delta-G solvation = -27634.258454 eV Core-core repulsion = 23599.952538 eV Total energy + Delta-G solvation = -4034.305916 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.072 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.96936 -41.32925 -40.45617 -38.59354 -37.76329 -35.62273 -34.48692 -32.72119 -32.02706 -31.62167 -31.05390 -29.86043 -27.51498 -27.00522 -24.43511 -23.83205 -23.03012 -21.57867 -21.47762 -20.48441 -20.25355 -18.95719 -18.55740 -17.54992 -17.26323 -17.05894 -16.88878 -16.45981 -16.03463 -15.96908 -15.76809 -15.49434 -15.03180 -14.94498 -14.68121 -14.48861 -14.39106 -14.30448 -14.27189 -13.90073 -13.58530 -13.39903 -13.33911 -13.21766 -12.99184 -12.83501 -12.68111 -12.34284 -12.19904 -12.14511 -11.99993 -11.60461 -11.44658 -11.37612 -11.18847 -10.68879 -10.47698 -10.27824 -9.91738 -9.38165 -5.15316 0.02625 0.51221 0.86761 0.95736 1.23922 1.35608 1.53306 1.85629 2.03346 2.14084 3.04496 3.07126 3.41273 3.53572 3.57839 3.62595 3.67503 3.87346 3.98125 4.03371 4.04175 4.10552 4.23978 4.27126 4.30028 4.35174 4.36065 4.41510 4.46923 4.56773 4.61787 4.65552 4.66671 4.77626 4.92398 4.98254 5.05227 5.09105 5.15175 5.19475 5.22166 5.26718 5.39500 5.49473 5.69469 6.32180 6.55038 6.75869 6.96599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C 0.358 3.642 3 O -0.510 6.510 4 C -0.135 4.135 5 H 0.134 0.866 6 C -0.101 4.101 7 C -0.114 4.114 8 C 0.145 3.855 9 H 0.062 0.938 10 N -0.696 5.696 11 C 0.589 3.411 12 O -0.579 6.579 13 C -0.055 4.055 14 C -0.099 4.099 15 C -0.179 4.179 16 Br -0.008 7.008 17 C 0.078 3.922 18 C -0.058 4.058 19 O -0.557 6.557 20 Si 0.777 3.223 21 N -0.400 5.400 22 C 0.060 3.940 23 C -0.120 4.120 24 C -0.104 4.104 25 H 0.110 0.890 26 H 0.076 0.924 27 H 0.116 0.884 28 H 0.049 0.951 29 H 0.103 0.897 30 H 0.084 0.916 31 H 0.104 0.896 32 H 0.419 0.581 33 H 0.187 0.813 34 H 0.108 0.892 35 H 0.412 0.588 36 H -0.279 1.279 37 H -0.293 1.293 38 H 0.073 0.927 39 H 0.113 0.887 40 H 0.095 0.905 41 H 0.091 0.909 42 H 0.041 0.959 43 H 0.064 0.936 44 H 0.045 0.955 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.447 -7.173 0.576 7.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.260 4.260 2 C 0.237 3.763 3 O -0.387 6.387 4 C -0.154 4.154 5 H 0.151 0.849 6 C -0.139 4.139 7 C -0.152 4.152 8 C 0.041 3.959 9 H 0.080 0.920 10 N -0.347 5.347 11 C 0.377 3.623 12 O -0.460 6.460 13 C -0.169 4.169 14 C -0.126 4.126 15 C -0.265 4.265 16 Br 0.076 6.924 17 C -0.043 4.043 18 C -0.168 4.168 19 O -0.368 6.368 20 Si 0.680 3.320 21 N -0.073 5.073 22 C -0.080 4.080 23 C -0.158 4.158 24 C -0.143 4.143 25 H 0.128 0.872 26 H 0.095 0.905 27 H 0.134 0.866 28 H 0.068 0.932 29 H 0.121 0.879 30 H 0.102 0.898 31 H 0.122 0.878 32 H 0.257 0.743 33 H 0.205 0.795 34 H 0.126 0.874 35 H 0.265 0.735 36 H -0.206 1.206 37 H -0.220 1.220 38 H 0.092 0.908 39 H 0.132 0.868 40 H 0.114 0.886 41 H 0.109 0.891 42 H 0.060 0.940 43 H 0.083 0.917 44 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -2.235 -5.531 1.157 6.076 hybrid contribution -0.304 0.445 -0.237 0.588 sum -2.538 -5.086 0.920 5.758 Atomic orbital electron populations 1.22374 0.91830 1.05968 1.05872 1.25309 0.93479 0.89779 0.67779 1.90429 1.73281 1.37038 1.37904 1.21904 0.96926 0.97324 0.99198 0.84851 1.21390 1.02051 0.96793 0.93660 1.21759 0.93212 0.98490 1.01727 1.21083 0.93450 0.84800 0.96527 0.91960 1.45571 1.04585 1.11097 1.73444 1.17009 0.83136 0.86214 0.75943 1.90809 1.68532 1.33953 1.52715 1.20243 0.84004 0.95088 1.17596 1.21574 1.00202 0.88244 1.02595 1.20991 0.95222 0.92041 1.18246 1.96662 1.98254 0.99262 1.98202 1.20125 0.96305 0.82433 1.05459 1.24506 0.85790 1.01026 1.05450 1.86400 1.24669 1.70056 1.55710 0.94750 0.87026 0.79327 0.70929 1.43950 1.06915 1.06081 1.50358 1.22551 0.92931 0.89006 1.03541 1.21828 0.99914 0.97682 0.96383 1.21337 0.95487 0.96934 1.00510 0.87221 0.90544 0.86557 0.93226 0.87885 0.89780 0.87803 0.74291 0.79537 0.87383 0.73538 1.20574 1.22017 0.90842 0.86820 0.88645 0.89061 0.93963 0.91726 0.93638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 1.29 10.24 71.24 0.73 2.02 16 2 C 0.36 0.21 6.32 29.10 0.18 0.39 16 3 O -0.51 -5.78 16.92 -1.45 -0.02 -5.80 16 4 C -0.13 0.57 2.45 -11.54 -0.03 0.54 16 5 H 0.13 -1.42 8.12 -2.39 -0.02 -1.44 16 6 C -0.10 0.58 5.19 30.60 0.16 0.74 16 7 C -0.11 0.85 5.39 30.59 0.16 1.02 16 8 C 0.15 -0.07 2.50 44.99 0.11 0.04 16 9 H 0.06 0.39 7.51 -2.39 -0.02 0.38 16 10 N -0.70 0.49 5.06 -446.51 -2.26 -1.77 16 11 C 0.59 4.29 7.74 86.45 0.67 4.96 16 12 O -0.58 -8.55 14.35 -4.35 -0.06 -8.61 16 13 C -0.06 -0.36 6.88 40.35 0.28 -0.08 16 14 C -0.10 -0.24 10.34 22.58 0.23 -0.01 16 15 C -0.18 -0.84 6.53 22.03 0.14 -0.70 16 16 Br -0.01 -0.02 33.07 -20.37 -0.67 -0.69 16 17 C 0.08 0.44 5.12 41.34 0.21 0.65 16 18 C -0.06 0.03 2.78 71.24 0.20 0.23 16 19 O -0.56 1.30 11.21 -148.98 -1.67 -0.37 16 20 Si 0.78 -1.66 31.56 68.60 2.17 0.50 16 21 N -0.40 -3.10 3.13 -519.61 -1.63 -4.73 16 22 C 0.06 0.39 8.80 127.77 1.12 1.52 16 23 C -0.12 -0.01 5.49 30.58 0.17 0.15 16 24 C -0.10 -0.15 4.80 30.58 0.15 -0.01 16 25 H 0.11 -0.92 8.14 -2.38 -0.02 -0.94 16 26 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 27 H 0.12 -1.42 8.12 -2.39 -0.02 -1.44 16 28 H 0.05 -0.03 8.14 -2.39 -0.02 -0.04 16 29 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 30 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 31 H 0.10 -1.29 8.14 -2.39 -0.02 -1.31 16 32 H 0.42 -3.08 7.50 -92.70 -0.70 -3.78 16 33 H 0.19 -0.94 7.45 -2.91 -0.02 -0.97 16 34 H 0.11 -0.34 6.96 -2.39 -0.02 -0.35 16 35 H 0.41 -5.46 8.74 -74.06 -0.65 -6.11 16 36 H -0.28 -0.88 6.04 99.48 0.60 -0.27 16 37 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 38 H 0.07 0.49 7.52 -2.39 -0.02 0.47 16 39 H 0.11 0.39 5.91 -2.38 -0.01 0.37 16 40 H 0.09 0.89 6.40 -2.39 -0.02 0.87 16 41 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 42 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 43 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 44 H 0.04 0.35 7.86 -2.39 -0.02 0.33 16 Total: 0.00 -27.15 374.37 -0.03 -27.18 By element: Atomic # 1 Polarization: -16.79 SS G_CDS: -0.37 Total: -17.16 kcal Atomic # 6 Polarization: 6.96 SS G_CDS: 4.49 Total: 11.46 kcal Atomic # 7 Polarization: -2.61 SS G_CDS: -3.89 Total: -6.50 kcal Atomic # 8 Polarization: -13.03 SS G_CDS: -1.76 Total: -14.79 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 2.17 Total: 0.50 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.69 kcal Total: -27.15 -0.03 -27.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13287736_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.927 kcal (2) G-P(sol) polarization free energy of solvation -27.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.179 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds