Wall clock time and date at job start Sun Mar 7 2021 02:57:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35539 * 125.67757 * 2 1 4 4 C 1.35447 * 108.87141 * 180.29784 * 3 2 1 5 5 C 1.50698 * 126.06632 * 179.68950 * 4 3 2 6 6 O 1.42894 * 109.47614 * 300.01732 * 5 4 3 7 7 Si 1.86307 * 109.46926 * 180.02562 * 5 4 3 8 8 H 1.48497 * 109.47076 * 60.00326 * 7 5 4 9 9 H 1.48504 * 109.46879 * 180.02562 * 7 5 4 10 10 H 1.48498 * 109.47119 * 300.00010 * 7 5 4 11 11 C 1.39835 * 107.86320 * 359.72723 * 4 3 2 12 12 C 1.37644 * 125.68071 * 179.83202 * 2 1 3 13 13 C 1.46684 * 126.23289 * 359.97438 * 12 2 1 14 14 O 1.21698 * 119.99928 * 357.78347 * 13 12 2 15 15 N 1.34776 * 120.00292 * 177.78924 * 13 12 2 16 16 C 1.46498 * 120.00004 * 175.22494 * 15 13 12 17 17 C 1.50703 * 109.46881 * 179.97438 * 16 15 13 18 18 C 1.38342 * 119.85791 * 90.00037 * 17 16 15 19 19 C 1.37972 * 120.14366 * 180.02562 * 18 17 16 20 20 C 1.39537 * 119.85225 * 359.97404 * 19 18 17 21 21 C 1.43202 * 120.14083 * 179.97438 * 20 19 18 22 22 C 9.79625 * 92.85977 * 3.62980 * 7 1 2 23 23 Si 9.37186 * 173.48890 * 345.65104 * 15 1 2 24 24 C 1.86297 * 109.47318 * 56.92962 * 23 22 21 25 25 C 1.86301 * 109.47116 * 176.92684 * 23 22 21 26 26 C 1.86299 * 109.47032 * 296.93046 * 23 22 21 27 27 C 1.39541 * 119.72187 * 0.25550 * 20 19 18 28 28 C 1.37973 * 119.85048 * 359.51275 * 27 20 19 29 29 H 1.08998 * 109.47327 * 265.97472 * 1 2 3 30 30 H 1.09000 * 109.47167 * 25.97785 * 1 2 3 31 31 H 1.09005 * 109.46694 * 145.97161 * 1 2 3 32 32 H 1.08001 * 125.56372 * 359.97438 * 3 2 1 33 33 H 1.09008 * 109.46996 * 60.02235 * 5 4 3 34 34 H 0.96696 * 114.00261 * 300.00250 * 6 5 4 35 35 H 1.08006 * 126.45571 * 179.97438 * 11 4 3 36 36 H 0.97005 * 119.99467 * 355.22289 * 15 13 12 37 37 H 1.08998 * 109.47014 * 59.99816 * 16 15 13 38 38 H 1.08994 * 109.46815 * 299.99418 * 16 15 13 39 39 H 1.08001 * 119.93077 * 0.02562 * 18 17 16 40 40 H 1.07996 * 120.07609 * 179.97438 * 19 18 17 41 41 H 1.09003 * 109.47444 * 59.99235 * 24 23 22 42 42 H 1.09001 * 109.47655 * 179.97438 * 24 23 22 43 43 H 1.09004 * 109.47081 * 299.99971 * 24 23 22 44 44 H 1.09010 * 109.46862 * 60.00077 * 25 23 22 45 45 H 1.08991 * 109.47207 * 179.97438 * 25 23 22 46 46 H 1.08997 * 109.46866 * 300.00422 * 25 23 22 47 47 H 1.08988 * 109.47673 * 60.00167 * 26 23 22 48 48 H 1.09001 * 109.46712 * 180.02562 * 26 23 22 49 49 H 1.08997 * 109.47154 * 299.99654 * 26 23 22 50 50 H 1.08000 * 120.07209 * 179.72511 * 27 20 19 51 51 H 1.08005 * 119.92864 * 180.23156 * 28 27 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5521 0.7094 -0.0067 5 6 4.7536 1.6190 -0.0156 6 8 4.7199 2.4414 -1.1837 7 14 6.3089 0.5933 -0.0232 8 1 6.3294 -0.2657 -1.2343 9 1 7.4929 1.4897 -0.0313 10 1 6.3441 -0.2614 1.1907 11 6 3.5779 -0.6887 -0.0047 12 6 2.2678 -1.1180 0.0033 13 6 1.8125 -2.5124 0.0079 14 8 0.6225 -2.7637 0.0499 15 7 2.7119 -3.5153 -0.0343 16 6 2.2642 -4.9058 0.0758 17 6 3.4562 -5.8247 0.0000 18 6 4.1201 -6.1887 1.1579 19 6 5.2124 -7.0292 1.0952 20 6 5.6468 -7.5128 -0.1395 21 6 6.7801 -8.3851 -0.2117 22 6 7.7105 -9.0991 -0.2648 23 14 9.2145 -10.2561 -0.3633 24 6 9.0612 -11.3474 -1.8654 25 6 10.7716 -9.2411 -0.4896 26 6 9.2854 -11.3143 1.1683 27 6 4.9758 -7.1381 -1.3042 28 6 3.8819 -6.3007 -1.2273 29 1 -0.3634 -0.0721 1.0251 30 1 -0.3633 0.9238 -0.4501 31 1 -0.3633 -0.8518 -0.5751 32 1 1.9082 2.1236 -0.0004 33 1 4.7385 2.2497 0.8734 34 1 4.7310 1.9459 -2.0140 35 1 4.4583 -1.3144 -0.0090 36 1 3.6557 -3.3162 -0.1375 37 1 1.5786 -5.1324 -0.7407 38 1 1.7546 -5.0490 1.0286 39 1 3.7826 -5.8140 2.1129 40 1 5.7301 -7.3123 1.9998 41 1 9.0196 -10.7283 -2.7616 42 1 9.9242 -12.0108 -1.9223 43 1 8.1502 -11.9413 -1.7916 44 1 10.8613 -8.6025 0.3894 45 1 11.6344 -9.9047 -0.5457 46 1 10.7300 -8.6220 -1.3857 47 1 8.3745 -11.9082 1.2422 48 1 10.1485 -11.9777 1.1119 49 1 9.3752 -10.6758 2.0472 50 1 5.3098 -7.5055 -2.2632 51 1 3.3593 -6.0129 -2.1276 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13422146_10803934.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:57:25 Heat of formation + Delta-G solvation = 0.339939 kcal Electronic energy + Delta-G solvation = -28896.773770 eV Core-core repulsion = 24886.058886 eV Total energy + Delta-G solvation = -4010.714885 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 370.163 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.53720 -40.77242 -39.83245 -37.70195 -36.34869 -34.52544 -33.84821 -32.10587 -31.87662 -30.46711 -29.64619 -28.53671 -28.48615 -28.48566 -27.26718 -25.65683 -23.77515 -23.75813 -22.71055 -21.09381 -20.70687 -19.51874 -19.16900 -17.41551 -17.12311 -17.06998 -16.94113 -16.54074 -16.11970 -15.94513 -15.82902 -15.69185 -15.37571 -14.98295 -14.63302 -14.55545 -14.45585 -14.32167 -14.28791 -14.15776 -14.06605 -13.96989 -13.74720 -13.67544 -13.38073 -13.37797 -13.20820 -13.16519 -13.15269 -12.66354 -12.37193 -12.28155 -12.16867 -12.06872 -12.05219 -11.76442 -11.61351 -11.08434 -10.92769 -10.75010 -10.37079 -10.23058 -10.06254 -9.73225 -9.49183 -9.21091 -0.27273 0.29917 0.43777 1.25039 1.35226 1.44497 1.48411 1.55129 1.57828 1.63117 1.68566 2.00211 2.17042 2.31600 2.32303 2.34223 2.50199 3.05007 3.47363 3.57164 3.70337 3.75222 3.83768 3.84725 3.90503 4.02839 4.17230 4.25694 4.27873 4.29008 4.32651 4.58413 4.59736 4.64089 4.64305 4.64488 4.68640 4.68896 4.69088 4.70896 4.71860 4.74638 4.84038 4.94376 5.09252 5.19119 5.26885 5.38188 5.40387 5.43105 5.47898 5.48101 5.65701 5.79988 5.90868 6.14807 6.40993 6.66299 6.68248 7.12893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.407 5.407 3 C 0.054 3.946 4 C -0.212 4.212 5 C -0.045 4.045 6 O -0.544 6.544 7 Si 0.951 3.049 8 H -0.253 1.253 9 H -0.256 1.256 10 H -0.252 1.252 11 C -0.142 4.142 12 C -0.047 4.047 13 C 0.591 3.409 14 O -0.545 6.545 15 N -0.717 5.717 16 C 0.165 3.835 17 C -0.106 4.106 18 C -0.097 4.097 19 C -0.099 4.099 20 C 0.014 3.986 21 C -0.145 4.145 22 C -0.388 4.388 23 Si 1.144 2.856 24 C -0.453 4.453 25 C -0.453 4.453 26 C -0.453 4.453 27 C -0.099 4.099 28 C -0.097 4.097 29 H 0.079 0.921 30 H 0.086 0.914 31 H 0.100 0.900 32 H 0.175 0.825 33 H 0.113 0.887 34 H 0.375 0.625 35 H 0.142 0.858 36 H 0.404 0.596 37 H 0.082 0.918 38 H 0.081 0.919 39 H 0.131 0.869 40 H 0.129 0.871 41 H 0.072 0.928 42 H 0.077 0.923 43 H 0.072 0.928 44 H 0.072 0.928 45 H 0.077 0.923 46 H 0.072 0.928 47 H 0.072 0.928 48 H 0.077 0.923 49 H 0.072 0.928 50 H 0.129 0.871 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.604 -1.472 -0.337 3.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.079 5.079 3 C -0.083 4.083 4 C -0.218 4.218 5 C -0.157 4.157 6 O -0.349 6.349 7 Si 0.774 3.226 8 H -0.176 1.176 9 H -0.180 1.180 10 H -0.176 1.176 11 C -0.168 4.168 12 C -0.161 4.161 13 C 0.379 3.621 14 O -0.424 6.424 15 N -0.369 5.369 16 C 0.042 3.958 17 C -0.106 4.106 18 C -0.115 4.115 19 C -0.117 4.117 20 C 0.014 3.986 21 C -0.145 4.145 22 C -0.422 4.422 23 Si 1.330 2.670 24 C -0.561 4.561 25 C -0.560 4.560 26 C -0.560 4.560 27 C -0.117 4.117 28 C -0.115 4.115 29 H 0.098 0.902 30 H 0.105 0.895 31 H 0.119 0.881 32 H 0.192 0.808 33 H 0.131 0.869 34 H 0.222 0.778 35 H 0.160 0.840 36 H 0.240 0.760 37 H 0.100 0.900 38 H 0.099 0.901 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.091 0.909 42 H 0.096 0.904 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.096 0.904 46 H 0.091 0.909 47 H 0.091 0.909 48 H 0.096 0.904 49 H 0.091 0.909 50 H 0.147 0.853 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.951 -1.651 0.163 2.561 hybrid contribution -0.323 0.097 -0.341 0.479 sum 1.628 -1.554 -0.178 2.258 Atomic orbital electron populations 1.22310 0.75527 1.05103 1.04475 1.43922 1.07083 1.04869 1.51993 1.21913 0.89745 0.91637 1.04990 1.19758 0.94790 0.93635 1.13580 1.24263 1.02396 0.97755 0.91236 1.86483 1.97154 1.35791 1.15472 0.85691 0.76640 0.78670 0.81616 1.17636 1.18000 1.17562 1.21189 0.94705 0.94784 1.06122 1.19857 0.90059 0.87574 1.18596 1.16956 0.85523 0.83467 0.76142 1.90823 1.15917 1.84883 1.50763 1.45695 1.10678 1.05425 1.75082 1.20222 0.93675 0.78308 1.03606 1.19935 0.97541 0.99476 0.93689 1.21052 0.94973 0.97217 0.98276 1.21256 0.96589 0.96931 0.96896 1.16260 0.92521 0.95933 0.93868 1.20971 0.95480 0.97627 1.00402 1.36090 1.04230 1.02185 0.99715 0.77005 0.59841 0.62897 0.67303 1.26120 1.05099 1.10021 1.14810 1.26120 1.15267 1.09615 1.05036 1.26116 1.04971 1.09714 1.15243 1.21258 0.95196 0.97450 0.97771 1.21053 0.96228 0.96810 0.97415 0.90215 0.89497 0.88117 0.80804 0.86941 0.77775 0.84033 0.76049 0.89987 0.90081 0.85085 0.85264 0.90919 0.90366 0.90900 0.90911 0.90373 0.90912 0.90899 0.90375 0.90913 0.85267 0.85097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.02 10.44 59.85 0.62 0.60 16 2 N -0.41 -0.54 3.16 -120.23 -0.38 -0.92 16 3 C 0.05 0.02 11.28 -16.91 -0.19 -0.17 16 4 C -0.21 -0.12 5.41 -105.02 -0.57 -0.69 16 5 C -0.04 0.02 3.00 36.00 0.11 0.12 16 6 O -0.54 -0.17 12.87 -35.23 -0.45 -0.62 16 7 Si 0.95 -0.37 25.92 -169.99 -4.41 -4.77 16 8 H -0.25 0.05 7.11 56.52 0.40 0.45 16 9 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 10 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 11 C -0.14 -0.11 8.83 -39.12 -0.35 -0.46 16 12 C -0.05 -0.10 6.89 -81.98 -0.56 -0.66 16 13 C 0.59 1.58 7.78 -12.85 -0.10 1.48 16 14 O -0.54 -2.93 14.80 5.19 0.08 -2.86 16 15 N -0.72 -0.15 5.53 -62.80 -0.35 -0.50 16 16 C 0.16 -0.03 5.80 -5.19 -0.03 -0.06 16 17 C -0.11 0.03 5.25 -104.54 -0.55 -0.52 16 18 C -0.10 0.02 9.68 -39.64 -0.38 -0.37 16 19 C -0.10 -0.10 9.75 -39.19 -0.38 -0.48 16 20 C 0.01 0.03 5.72 -107.00 -0.61 -0.58 16 21 C -0.14 -0.45 13.24 -38.84 -0.51 -0.97 16 22 C -0.39 -0.56 12.15 29.55 0.36 -0.20 16 23 Si 1.14 -3.21 14.26 -169.99 -2.42 -5.63 16 24 C -0.45 1.01 8.65 101.05 0.87 1.88 16 25 C -0.45 1.01 8.65 101.05 0.87 1.88 16 26 C -0.45 1.00 8.65 101.05 0.87 1.88 16 27 C -0.10 -0.10 9.75 -39.19 -0.38 -0.48 16 28 C -0.10 0.02 9.68 -39.64 -0.38 -0.37 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.09 -0.23 8.13 -51.93 -0.42 -0.66 16 31 H 0.10 0.11 6.61 -51.93 -0.34 -0.23 16 32 H 0.17 -0.28 8.06 -52.49 -0.42 -0.71 16 33 H 0.11 -0.12 7.96 -51.92 -0.41 -0.53 16 34 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 35 H 0.14 -0.14 5.77 -52.48 -0.30 -0.45 16 36 H 0.40 -0.56 7.37 -40.82 -0.30 -0.86 16 37 H 0.08 0.01 8.08 -51.93 -0.42 -0.41 16 38 H 0.08 0.00 8.08 -51.93 -0.42 -0.41 16 39 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 40 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 41 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 42 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.14 7.96 -51.92 -0.41 -0.55 16 45 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.07 -0.13 7.96 -51.94 -0.41 -0.55 16 48 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 49 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 50 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 51 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 LS Contribution 439.28 15.07 6.62 6.62 Total: 0.00 -8.71 439.28 -9.89 -18.60 By element: Atomic # 1 Polarization: -4.49 SS G_CDS: -7.28 Total: -11.77 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -1.29 Total: 1.85 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -0.73 Total: -1.41 kcal Atomic # 8 Polarization: -3.10 SS G_CDS: -0.38 Total: -3.48 kcal Atomic # 14 Polarization: -3.58 SS G_CDS: -6.83 Total: -10.41 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -8.71 -9.89 -18.60 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13422146_10803934.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.942 kcal (2) G-P(sol) polarization free energy of solvation -8.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.602 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.340 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds