Wall clock time and date at job start Sun Mar 7 2021 03:33:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86299 * 109.46646 * 2 1 4 4 C 1.86293 * 109.47318 * 240.00288 * 2 1 3 5 5 C 1.90000 * 109.47168 * 119.99863 * 2 1 3 6 6 C 3.07393 * 109.47246 * 120.00035 * 2 1 3 7 7 C 4.50598 * 109.47280 * 119.99999 * 2 1 3 8 8 C 1.39538 * 120.13877 * 86.80945 * 7 6 5 9 9 C 1.37975 * 119.85322 * 179.74079 * 8 7 6 10 10 C 1.38344 * 120.14247 * 0.53432 * 9 8 7 11 11 C 1.50697 * 119.85875 * 179.69958 * 10 9 8 12 12 N 1.46508 * 109.46910 * 270.02048 * 11 10 9 13 13 C 1.34780 * 119.99537 * 179.97438 * 12 11 10 14 14 O 1.21564 * 120.00279 * 0.02562 * 13 12 11 15 15 C 1.47703 * 119.99466 * 179.97438 * 13 12 11 16 16 C 1.39615 * 120.15478 * 0.02562 * 15 13 12 17 17 C 1.38115 * 119.85061 * 179.97438 * 16 15 13 18 18 F 1.35102 * 119.91568 * 180.02562 * 17 16 15 19 19 C 1.38608 * 120.16309 * 0.02562 * 17 16 15 20 20 C 1.50704 * 119.84198 * 179.97438 * 19 17 16 21 21 O 1.42900 * 109.46948 * 284.99413 * 20 19 17 22 22 Si 1.86299 * 109.47189 * 164.99561 * 20 19 17 23 23 H 1.48503 * 109.47055 * 299.99999 * 22 20 19 24 24 H 1.48499 * 109.47066 * 59.99799 * 22 20 19 25 25 H 1.48503 * 109.47218 * 180.02562 * 22 20 19 26 26 C 1.38231 * 120.31652 * 0.02562 * 19 17 16 27 27 C 1.38266 * 120.14626 * 359.70713 * 26 19 17 28 28 F 1.35099 * 120.08775 * 180.29877 * 27 26 19 29 29 C 1.38344 * 120.28621 * 359.71923 * 10 9 8 30 30 C 1.37976 * 120.14217 * 0.02562 * 29 10 9 31 31 H 1.09000 * 109.47332 * 299.99899 * 1 2 3 32 32 H 1.09002 * 109.47176 * 60.00004 * 1 2 3 33 33 H 1.09004 * 109.46801 * 179.97438 * 1 2 3 34 34 H 1.09001 * 109.47058 * 179.97438 * 3 2 1 35 35 H 1.09002 * 109.47329 * 299.99902 * 3 2 1 36 36 H 1.08996 * 109.47529 * 60.00319 * 3 2 1 37 37 H 1.09001 * 109.47264 * 300.00126 * 4 2 1 38 38 H 1.09002 * 109.47236 * 59.99744 * 4 2 1 39 39 H 1.08998 * 109.47688 * 179.97438 * 4 2 1 40 40 H 1.07994 * 120.07438 * 359.97438 * 8 7 6 41 41 H 1.07997 * 119.92811 * 180.25840 * 9 8 7 42 42 H 1.09000 * 109.47322 * 30.01825 * 11 10 9 43 43 H 1.08994 * 109.47456 * 150.02543 * 11 10 9 44 44 H 0.96996 * 119.99768 * 0.02562 * 12 11 10 45 45 H 1.07999 * 120.07607 * 359.95045 * 16 15 13 46 46 H 1.09003 * 109.47144 * 44.99219 * 20 19 17 47 47 H 0.96701 * 113.99816 * 179.97438 * 21 20 19 48 48 H 1.07999 * 119.92514 * 179.97438 * 26 19 17 49 49 H 1.07999 * 119.93193 * 179.97438 * 29 10 9 50 50 H 1.08003 * 120.07184 * 179.97438 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4839 1.7565 0.0000 4 6 2.4841 -0.8781 -1.5211 5 6 2.4964 -0.8956 1.5514 6 6 2.8877 -1.4491 2.5098 7 6 3.3651 -2.1241 3.6791 8 6 4.1119 -3.2964 3.5555 9 6 4.5735 -3.9390 4.6858 10 6 4.2880 -3.4297 5.9400 11 6 4.7897 -4.1405 7.1704 12 7 3.7925 -5.1202 7.6091 13 6 4.0271 -5.8792 8.6978 14 8 5.0658 -5.7506 9.3162 15 6 3.0216 -6.8664 9.1403 16 6 1.8273 -7.0164 8.4329 17 6 0.8916 -7.9419 8.8519 18 9 -0.2643 -8.0884 8.1680 19 6 1.1356 -8.7206 9.9723 20 6 0.1093 -9.7278 10.4235 21 8 -0.9801 -9.0490 11.0516 22 14 0.8885 -10.9074 11.6368 23 1 2.0206 -11.6127 10.9841 24 1 1.3886 -10.1499 12.8121 25 1 -0.1226 -11.9002 12.0809 26 6 2.3152 -8.5770 10.6785 27 6 3.2632 -7.6584 10.2673 28 9 4.4183 -7.5233 10.9548 29 6 3.5437 -2.2708 6.0695 30 6 3.0807 -1.6156 4.9469 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 3.5739 1.7566 0.0005 35 1 2.1205 2.2703 -0.8900 36 1 2.1206 2.2703 0.8900 37 1 2.1207 -1.9058 -1.5212 38 1 2.1207 -0.3643 -2.4111 39 1 3.5740 -0.8777 -1.5214 40 1 4.3313 -3.6977 2.5772 41 1 5.1551 -4.8441 4.5914 42 1 5.7241 -4.6519 6.9391 43 1 4.9599 -3.4146 7.9655 44 1 2.9639 -5.2230 7.1154 45 1 1.6354 -6.4098 7.5602 46 1 -0.2579 -10.2837 9.5608 47 1 -1.6801 -9.6368 11.3673 48 1 2.4985 -9.1868 11.5508 49 1 3.3239 -1.8784 7.0514 50 1 2.4993 -0.7112 5.0494 RHF calculation, no. of doubly occupied orbitals= 71 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13422146_12360598.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:33:55 Heat of formation + Delta-G solvation = -102.217612 kcal Electronic energy + Delta-G solvation = -32917.688198 eV Core-core repulsion = 28056.355522 eV Total energy + Delta-G solvation = -4861.332675 eV No. of doubly occupied orbitals = 71 Molecular weight (most abundant/longest-lived isotopes) = 403.133 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.06630 -49.95344 -41.36664 -40.49277 -39.69615 -37.73203 -36.39182 -34.49625 -33.49379 -32.12035 -31.46453 -31.37799 -29.65382 -28.48950 -28.48578 -28.34655 -26.88162 -24.45877 -23.78966 -23.73883 -22.81197 -21.80378 -19.76825 -19.52543 -18.82980 -18.66278 -18.36361 -17.54647 -17.12567 -16.95170 -16.73202 -16.44402 -16.36449 -16.25993 -16.02436 -15.72481 -15.59903 -15.57745 -15.30943 -14.71330 -14.57615 -14.47780 -14.31105 -14.28311 -14.13759 -14.06917 -13.96673 -13.79540 -13.74869 -13.55502 -13.38269 -13.37823 -13.16689 -13.00794 -12.67996 -12.42151 -12.37947 -12.27002 -12.17791 -12.07498 -12.00474 -11.62183 -11.16891 -10.94831 -10.75522 -10.62361 -10.56667 -10.25551 -10.07830 -9.78454 -9.50697 -0.79927 -0.31563 -0.28863 0.28384 0.88573 1.27088 1.31718 1.34592 1.45596 1.47403 1.57207 1.72719 1.90355 2.27523 2.31294 2.31632 2.34575 2.74163 2.84095 3.01653 3.03537 3.26469 3.40167 3.48472 3.62318 3.69772 3.73778 3.82662 3.89168 4.01703 4.22162 4.24298 4.27121 4.32717 4.48144 4.58294 4.62024 4.64149 4.64302 4.65961 4.68453 4.68784 4.68940 4.70753 4.72652 4.82853 4.92966 5.15158 5.19909 5.37774 5.38031 5.39055 5.41454 5.47658 5.48014 5.78424 6.25830 6.35809 6.67317 7.00365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.452 4.452 2 Si 1.143 2.857 3 C -0.453 4.453 4 C -0.452 4.452 5 C -0.387 4.387 6 C -0.145 4.145 7 C 0.015 3.985 8 C -0.099 4.099 9 C -0.097 4.097 10 C -0.107 4.107 11 C 0.162 3.838 12 N -0.720 5.720 13 C 0.561 3.439 14 O -0.513 6.513 15 C -0.141 4.141 16 C -0.093 4.093 17 C 0.113 3.887 18 F -0.121 7.121 19 C -0.054 4.054 20 C -0.088 4.088 21 O -0.539 6.539 22 Si 0.943 3.057 23 H -0.242 1.242 24 H -0.242 1.242 25 H -0.246 1.246 26 C -0.140 4.140 27 C 0.161 3.839 28 F -0.104 7.104 29 C -0.097 4.097 30 C -0.099 4.099 31 H 0.072 0.928 32 H 0.077 0.923 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.077 0.923 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.077 0.923 39 H 0.072 0.928 40 H 0.130 0.870 41 H 0.131 0.869 42 H 0.083 0.917 43 H 0.083 0.917 44 H 0.402 0.598 45 H 0.152 0.848 46 H 0.086 0.914 47 H 0.386 0.614 48 H 0.155 0.845 49 H 0.132 0.868 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.914 -0.872 -3.864 5.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.560 4.560 2 Si 1.328 2.672 3 C -0.560 4.560 4 C -0.560 4.560 5 C -0.422 4.422 6 C -0.145 4.145 7 C 0.015 3.985 8 C -0.117 4.117 9 C -0.115 4.115 10 C -0.107 4.107 11 C 0.039 3.961 12 N -0.373 5.373 13 C 0.347 3.653 14 O -0.388 6.388 15 C -0.145 4.145 16 C -0.113 4.113 17 C 0.093 3.907 18 F -0.099 7.099 19 C -0.056 4.056 20 C -0.198 4.198 21 O -0.346 6.346 22 Si 0.764 3.236 23 H -0.165 1.165 24 H -0.165 1.165 25 H -0.170 1.170 26 C -0.158 4.158 27 C 0.140 3.860 28 F -0.082 7.082 29 C -0.115 4.115 30 C -0.117 4.117 31 H 0.091 0.909 32 H 0.096 0.904 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.096 0.904 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.096 0.904 39 H 0.091 0.909 40 H 0.147 0.853 41 H 0.149 0.851 42 H 0.102 0.898 43 H 0.102 0.898 44 H 0.238 0.762 45 H 0.170 0.830 46 H 0.104 0.896 47 H 0.235 0.765 48 H 0.172 0.828 49 H 0.149 0.851 50 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.338 -0.880 -2.860 3.797 hybrid contribution -0.906 -0.309 -0.230 0.984 sum -3.243 -1.189 -3.089 4.634 Atomic orbital electron populations 1.26118 1.19965 1.04971 1.04969 0.77030 0.66035 0.64721 0.59390 1.26118 1.06726 1.18232 1.04967 1.26114 1.06714 1.08430 1.14772 1.36094 1.00184 1.01191 1.04708 1.20970 0.99692 0.98743 0.95118 1.16263 0.98106 0.94479 0.89684 1.21260 0.96948 0.94231 0.99235 1.21055 0.99272 0.99831 0.91378 1.19932 0.99972 0.96476 0.94351 1.20265 0.91341 0.90774 0.93706 1.45934 1.22572 1.39397 1.29421 1.17809 0.86121 0.80675 0.80730 1.90899 1.25972 1.67554 1.54394 1.19838 0.96473 1.00575 0.97622 1.21166 0.91836 0.97883 1.00379 1.17167 0.83484 0.97552 0.92468 1.91571 1.45778 1.94547 1.78013 1.19331 0.94812 0.97325 0.94083 1.24734 0.91530 0.99221 1.04287 1.86507 1.32211 1.36916 1.78926 0.85771 0.81030 0.77567 0.79270 1.16519 1.16534 1.16986 1.20988 0.93125 1.00077 1.01625 1.17421 0.83125 0.95124 0.90313 1.91653 1.45106 1.94234 1.77212 1.21061 0.96800 0.94730 0.98931 1.21263 0.99447 0.99970 0.90976 0.90900 0.90359 0.90903 0.90892 0.90357 0.90903 0.90903 0.90356 0.90893 0.85251 0.85069 0.89839 0.89841 0.76203 0.83024 0.89565 0.76526 0.82814 0.85057 0.85245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.03 8.65 101.05 0.87 1.90 16 2 Si 1.14 -3.22 14.26 -169.99 -2.42 -5.64 16 3 C -0.45 1.00 8.65 101.05 0.87 1.87 16 4 C -0.45 1.04 8.65 101.05 0.87 1.91 16 5 C -0.39 -0.55 12.14 29.55 0.36 -0.19 16 6 C -0.15 -0.44 13.24 -38.83 -0.51 -0.96 16 7 C 0.01 0.03 5.72 -107.00 -0.61 -0.58 16 8 C -0.10 -0.08 9.75 -39.19 -0.38 -0.46 16 9 C -0.10 0.05 9.68 -39.64 -0.38 -0.34 16 10 C -0.11 0.06 5.25 -104.55 -0.55 -0.49 16 11 C 0.16 -0.06 5.79 -5.19 -0.03 -0.09 16 12 N -0.72 0.31 5.50 -62.47 -0.34 -0.03 16 13 C 0.56 1.39 7.77 -12.39 -0.10 1.29 16 14 O -0.51 -3.25 15.34 5.31 0.08 -3.17 16 15 C -0.14 -0.19 5.88 -104.92 -0.62 -0.80 16 16 C -0.09 0.06 9.52 -39.11 -0.37 -0.31 16 17 C 0.11 0.05 7.23 -39.49 -0.29 -0.23 16 18 F -0.12 -0.15 16.73 2.25 0.04 -0.11 16 19 C -0.05 -0.02 5.30 -104.49 -0.55 -0.58 16 20 C -0.09 0.11 2.43 36.01 0.09 0.20 16 21 O -0.54 0.37 12.86 -35.23 -0.45 -0.08 16 22 Si 0.94 -1.73 25.48 -169.99 -4.33 -6.06 16 23 H -0.24 0.30 7.11 56.52 0.40 0.70 16 24 H -0.24 0.19 6.72 56.52 0.38 0.57 16 25 H -0.25 0.45 7.11 56.52 0.40 0.85 16 26 C -0.14 -0.10 8.62 -39.57 -0.34 -0.44 16 27 C 0.16 0.37 7.28 -38.97 -0.28 0.09 16 28 F -0.10 -0.47 15.55 2.25 0.04 -0.44 16 29 C -0.10 0.04 9.68 -39.64 -0.38 -0.35 16 30 C -0.10 -0.08 9.75 -39.19 -0.38 -0.46 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 32 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 33 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 34 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 35 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 36 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 40 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 41 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 42 H 0.08 -0.01 8.08 -51.93 -0.42 -0.43 16 43 H 0.08 0.00 8.08 -51.93 -0.42 -0.42 16 44 H 0.40 -1.05 6.50 -40.82 -0.27 -1.32 16 45 H 0.15 -0.52 6.40 -52.49 -0.34 -0.85 16 46 H 0.09 -0.24 7.89 -51.93 -0.41 -0.65 16 47 H 0.39 -2.00 8.74 45.56 0.40 -1.60 16 48 H 0.15 -0.11 4.86 -52.49 -0.25 -0.36 16 49 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 50 H 0.13 -0.03 8.06 -52.48 -0.42 -0.45 16 LS Contribution 442.12 15.07 6.66 6.66 Total: 0.00 -9.52 442.12 -9.39 -18.91 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -5.94 Total: -11.04 kcal Atomic # 6 Polarization: 3.71 SS G_CDS: -2.72 Total: 0.99 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.34 Total: -0.03 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.37 Total: -3.25 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.07 Total: -0.55 kcal Atomic # 14 Polarization: -4.94 SS G_CDS: -6.76 Total: -11.70 kcal Total LS contribution 6.66 Total: 6.66 kcal Total: -9.52 -9.39 -18.91 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13422146_12360598.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.306 kcal (2) G-P(sol) polarization free energy of solvation -9.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.911 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds