Wall clock time and date at job start Sun Mar 7 2021 03:39:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86300 * 109.47021 * 2 1 4 4 C 1.86298 * 109.47196 * 240.00063 * 2 1 3 5 5 C 1.89998 * 109.47058 * 120.00004 * 2 1 3 6 6 C 3.07401 * 109.47002 * 119.99783 * 2 1 3 7 7 C 4.50601 * 109.47061 * 119.99866 * 2 1 3 8 8 C 1.39542 * 120.14032 * 64.80743 * 7 6 5 9 9 C 1.37973 * 119.85104 * 180.02562 * 8 7 6 10 10 C 1.38344 * 120.14409 * 0.02627 * 9 8 7 11 11 C 1.50700 * 119.85640 * 179.97438 * 10 9 8 12 12 N 1.46503 * 109.47231 * 89.99618 * 11 10 9 13 13 C 1.34771 * 119.99794 * 180.02562 * 12 11 10 14 14 O 1.21564 * 120.00708 * 0.02562 * 13 12 11 15 15 C 1.47726 * 119.99713 * 180.02562 * 13 12 11 16 16 C 1.39633 * 120.11806 * 359.97438 * 15 13 12 17 17 C 1.37867 * 119.88004 * 179.97438 * 16 15 13 18 18 C 1.38630 * 120.11686 * 0.02562 * 17 16 15 19 19 F 1.35098 * 119.87978 * 179.97438 * 18 17 16 20 20 C 1.38681 * 120.23910 * 359.97438 * 18 17 16 21 21 C 1.50701 * 119.93837 * 179.97438 * 20 18 17 22 22 O 1.42895 * 109.47079 * 195.00416 * 21 20 18 23 23 Si 1.86301 * 109.47149 * 314.99911 * 21 20 18 24 24 H 1.48506 * 109.47302 * 59.99966 * 23 21 20 25 25 H 1.48503 * 109.47334 * 300.00099 * 23 21 20 26 26 H 1.48500 * 109.47376 * 180.02562 * 23 21 20 27 27 C 1.37809 * 120.12043 * 0.25658 * 20 18 17 28 28 C 1.38338 * 120.28635 * 0.25015 * 10 9 8 29 29 C 1.37977 * 120.14337 * 359.44722 * 28 10 9 30 30 H 1.09000 * 109.47304 * 300.00469 * 1 2 3 31 31 H 1.08994 * 109.47334 * 60.00132 * 1 2 3 32 32 H 1.08998 * 109.46912 * 180.02562 * 1 2 3 33 33 H 1.09001 * 109.46932 * 180.02562 * 3 2 1 34 34 H 1.08999 * 109.47179 * 299.99671 * 3 2 1 35 35 H 1.08994 * 109.47180 * 59.99937 * 3 2 1 36 36 H 1.09004 * 109.46554 * 299.99763 * 4 2 1 37 37 H 1.08994 * 109.47138 * 59.99685 * 4 2 1 38 38 H 1.08994 * 109.47183 * 180.02562 * 4 2 1 39 39 H 1.07994 * 120.07179 * 0.02562 * 8 7 6 40 40 H 1.08004 * 119.92482 * 180.02562 * 9 8 7 41 41 H 1.09006 * 109.47014 * 330.00045 * 11 10 9 42 42 H 1.08998 * 109.47279 * 210.00202 * 11 10 9 43 43 H 0.96998 * 119.99431 * 0.02562 * 12 11 10 44 44 H 1.07997 * 120.06054 * 359.97438 * 16 15 13 45 45 H 1.08000 * 119.93938 * 179.97438 * 17 16 15 46 46 H 1.09001 * 109.47380 * 74.99813 * 21 20 18 47 47 H 0.96696 * 114.00435 * 59.99627 * 22 21 20 48 48 H 1.08004 * 120.06040 * 179.72186 * 27 20 18 49 49 H 1.08006 * 119.92962 * 179.70629 * 28 10 9 50 50 H 1.07994 * 120.07082 * 180.25096 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4963 -0.8957 1.5513 6 6 2.8876 -1.4490 2.5100 7 6 3.3650 -2.1241 3.6792 8 6 3.6939 -3.4789 3.6208 9 6 4.1527 -4.1235 4.7511 10 6 4.2865 -3.4298 5.9405 11 6 4.7877 -4.1404 7.1713 12 7 6.2481 -4.0411 7.2318 13 6 6.9203 -4.6077 8.2534 14 8 6.3149 -5.2015 9.1244 15 6 8.3928 -4.5070 8.3148 16 6 9.0908 -3.8260 7.3154 17 6 10.4650 -3.7346 7.3778 18 6 11.1539 -4.3178 8.4300 19 9 12.5005 -4.2258 8.4861 20 6 10.4656 -4.9954 9.4252 21 6 11.2213 -5.6273 10.5657 22 8 10.3667 -6.5425 11.2542 23 14 12.7013 -6.5415 9.8989 24 1 13.5895 -5.5906 9.1833 25 1 12.2483 -7.5985 8.9593 26 1 13.4457 -7.1648 11.0226 27 6 9.0923 -5.0968 9.3701 28 6 3.9567 -2.0879 6.0064 29 6 3.5026 -1.4300 4.8818 30 1 -0.3634 0.5139 0.8899 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 3.5740 1.7564 -0.0005 34 1 2.1207 2.2703 -0.8900 35 1 2.1206 2.2703 0.8899 36 1 2.1207 -1.9059 -1.5210 37 1 2.1207 -0.3644 -2.4111 38 1 3.5740 -0.8786 -1.5209 39 1 3.5895 -4.0216 2.6930 40 1 4.4081 -5.1721 4.7072 41 1 4.4964 -5.1900 7.1288 42 1 4.3550 -3.6790 8.0589 43 1 6.7312 -3.5676 6.5367 44 1 8.5551 -3.3716 6.4950 45 1 11.0059 -3.2084 6.6051 46 1 11.5539 -4.8515 11.2553 47 1 10.0324 -7.2612 10.7004 48 1 8.5576 -5.6285 10.1433 49 1 4.0588 -1.5530 6.9392 50 1 3.2493 -0.3815 4.9336 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13422146_12496548.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:39:25 Heat of formation + Delta-G solvation = -56.859028 kcal Electronic energy + Delta-G solvation = -30204.466052 eV Core-core repulsion = 25814.554248 eV Total energy + Delta-G solvation = -4389.911804 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 385.142 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.39390 -41.46644 -40.54052 -39.59150 -37.72753 -36.38711 -34.43225 -32.93389 -32.17729 -32.13504 -31.25661 -29.66619 -28.50527 -28.49908 -27.74931 -26.95356 -24.74141 -23.80348 -23.31702 -22.89570 -21.50038 -19.56403 -19.47874 -18.86210 -18.25577 -17.79031 -17.18211 -16.90893 -16.81280 -16.50906 -16.10563 -16.01110 -15.88333 -15.78159 -15.23621 -15.18523 -14.84020 -14.59504 -14.45579 -14.32497 -14.28331 -14.18810 -14.08407 -14.02359 -13.95337 -13.89432 -13.40072 -13.39096 -13.29873 -13.18084 -12.82274 -12.68387 -12.42560 -12.39663 -12.19737 -12.08940 -12.01062 -11.63675 -11.35627 -11.14275 -10.97952 -10.92034 -10.77024 -10.28660 -10.11021 -10.08125 -9.74797 -9.51770 -0.54634 -0.29895 -0.06274 0.26809 1.08235 1.33010 1.44250 1.46961 1.51169 1.55718 1.62166 1.93650 1.98411 2.29856 2.30055 2.37269 2.56149 2.93318 3.01584 3.16598 3.30383 3.44495 3.52892 3.63806 3.72573 3.81248 3.84276 3.87917 4.05353 4.23450 4.25789 4.37902 4.45670 4.57216 4.60477 4.62768 4.62883 4.66888 4.67368 4.67715 4.69443 4.71179 4.78913 4.81820 4.91480 4.97480 5.01372 5.16207 5.22144 5.36647 5.37604 5.40302 5.46154 5.46768 5.53263 5.77044 6.33279 6.40107 6.65696 7.07725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.453 4.453 2 Si 1.142 2.858 3 C -0.452 4.452 4 C -0.452 4.452 5 C -0.388 4.388 6 C -0.145 4.145 7 C 0.014 3.986 8 C -0.099 4.099 9 C -0.097 4.097 10 C -0.106 4.106 11 C 0.161 3.839 12 N -0.723 5.723 13 C 0.561 3.439 14 O -0.528 6.528 15 C -0.142 4.142 16 C -0.060 4.060 17 C -0.152 4.152 18 C 0.117 3.883 19 F -0.121 7.121 20 C -0.158 4.158 21 C -0.078 4.078 22 O -0.534 6.534 23 Si 0.938 3.062 24 H -0.227 1.227 25 H -0.252 1.252 26 H -0.251 1.251 27 C -0.020 4.020 28 C -0.097 4.097 29 C -0.099 4.099 30 H 0.072 0.928 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.077 0.923 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.077 0.923 38 H 0.072 0.928 39 H 0.129 0.871 40 H 0.131 0.869 41 H 0.082 0.918 42 H 0.082 0.918 43 H 0.402 0.598 44 H 0.137 0.863 45 H 0.147 0.853 46 H 0.128 0.872 47 H 0.379 0.621 48 H 0.157 0.843 49 H 0.131 0.869 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.471 2.591 -5.661 6.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.560 4.560 2 Si 1.328 2.672 3 C -0.560 4.560 4 C -0.560 4.560 5 C -0.422 4.422 6 C -0.145 4.145 7 C 0.014 3.986 8 C -0.117 4.117 9 C -0.116 4.116 10 C -0.106 4.106 11 C 0.038 3.962 12 N -0.376 5.376 13 C 0.348 3.652 14 O -0.405 6.405 15 C -0.145 4.145 16 C -0.078 4.078 17 C -0.170 4.170 18 C 0.097 3.903 19 F -0.099 7.099 20 C -0.159 4.159 21 C -0.188 4.188 22 O -0.339 6.339 23 Si 0.758 3.242 24 H -0.150 1.150 25 H -0.175 1.175 26 H -0.175 1.175 27 C -0.038 4.038 28 C -0.116 4.116 29 C -0.117 4.117 30 H 0.091 0.909 31 H 0.096 0.904 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.096 0.904 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.097 0.903 38 H 0.091 0.909 39 H 0.147 0.853 40 H 0.149 0.851 41 H 0.100 0.900 42 H 0.100 0.900 43 H 0.237 0.763 44 H 0.155 0.845 45 H 0.165 0.835 46 H 0.145 0.855 47 H 0.227 0.773 48 H 0.175 0.825 49 H 0.149 0.851 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.005 2.051 -4.734 5.159 hybrid contribution -0.018 0.153 -0.444 0.470 sum -0.013 2.204 -5.178 5.627 Atomic orbital electron populations 1.26118 1.19965 1.04990 1.04975 0.77032 0.66056 0.64714 0.59387 1.26114 1.06693 1.18233 1.04980 1.26113 1.06691 1.08442 1.14776 1.36098 1.00077 1.01327 1.04686 1.20975 0.99761 0.98674 0.95124 1.16260 0.99377 0.92841 0.90107 1.21261 0.98277 0.93169 0.98969 1.21053 0.98557 1.00223 0.91746 1.19945 1.01438 0.94358 0.94903 1.20248 0.79435 1.00968 0.95511 1.45964 1.07514 1.57237 1.26834 1.18117 0.86789 0.78724 0.81525 1.90831 1.69540 1.41941 1.38170 1.19965 0.93214 1.03566 0.97789 1.21190 0.93505 0.95851 0.97283 1.21107 0.94730 1.02351 0.98851 1.17786 0.77440 0.99236 0.95831 1.91602 1.28479 1.93755 1.96077 1.20406 0.95192 1.02586 0.97710 1.24947 1.01038 0.96831 0.95978 1.86530 1.67312 1.40596 1.39429 0.86077 0.78083 0.79583 0.80441 1.14988 1.17519 1.17515 1.20982 0.91731 0.94760 0.96350 1.21058 0.98152 0.93759 0.98600 1.21261 0.98742 1.00208 0.91454 0.90896 0.90355 0.90894 0.90909 0.90353 0.90898 0.90901 0.90348 0.90909 0.85271 0.85093 0.89974 0.89975 0.76262 0.84498 0.83514 0.85454 0.77342 0.82547 0.85083 0.85266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.06 8.65 101.05 0.87 1.93 16 2 Si 1.14 -3.43 14.26 -169.99 -2.42 -5.85 16 3 C -0.45 1.12 8.65 101.05 0.87 1.99 16 4 C -0.45 1.12 8.65 101.05 0.87 2.00 16 5 C -0.39 -0.46 12.14 29.55 0.36 -0.11 16 6 C -0.15 -0.41 13.24 -38.84 -0.51 -0.92 16 7 C 0.01 0.03 5.72 -107.00 -0.61 -0.59 16 8 C -0.10 -0.05 9.75 -39.19 -0.38 -0.43 16 9 C -0.10 0.07 9.68 -39.64 -0.38 -0.31 16 10 C -0.11 0.10 5.25 -104.55 -0.55 -0.45 16 11 C 0.16 -0.12 5.79 -5.19 -0.03 -0.15 16 12 N -0.72 0.71 5.50 -62.47 -0.34 0.37 16 13 C 0.56 0.88 7.77 -12.39 -0.10 0.79 16 14 O -0.53 -2.78 16.34 5.31 0.09 -2.70 16 15 C -0.14 -0.04 5.87 -104.96 -0.62 -0.65 16 16 C -0.06 0.11 9.54 -39.20 -0.37 -0.26 16 17 C -0.15 0.21 10.01 -39.57 -0.40 -0.18 16 18 C 0.12 0.02 6.67 -39.27 -0.26 -0.24 16 19 F -0.12 -0.12 12.82 2.25 0.03 -0.09 16 20 C -0.16 -0.04 5.13 -104.61 -0.54 -0.58 16 21 C -0.08 0.01 2.97 36.01 0.11 0.12 16 22 O -0.53 -0.18 11.64 -35.23 -0.41 -0.59 16 23 Si 0.94 0.07 26.09 -169.99 -4.43 -4.36 16 24 H -0.23 -0.18 5.29 56.52 0.30 0.12 16 25 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 26 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 27 C -0.02 -0.01 8.78 -39.20 -0.34 -0.36 16 28 C -0.10 0.07 9.68 -39.64 -0.38 -0.32 16 29 C -0.10 -0.05 9.75 -39.19 -0.38 -0.44 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 31 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 33 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 34 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 35 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 36 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 37 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 38 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 39 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 40 H 0.13 -0.30 8.06 -52.48 -0.42 -0.72 16 41 H 0.08 -0.03 8.08 -51.93 -0.42 -0.45 16 42 H 0.08 -0.02 8.08 -51.93 -0.42 -0.44 16 43 H 0.40 -1.26 6.49 -40.82 -0.27 -1.52 16 44 H 0.14 -0.63 6.40 -52.49 -0.34 -0.97 16 45 H 0.15 -0.49 8.06 -52.49 -0.42 -0.91 16 46 H 0.13 -0.12 7.96 -51.93 -0.41 -0.53 16 47 H 0.38 -1.08 8.42 45.56 0.38 -0.69 16 48 H 0.16 0.18 6.65 -52.48 -0.35 -0.17 16 49 H 0.13 -0.28 8.06 -52.48 -0.42 -0.71 16 50 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 LS Contribution 433.90 15.07 6.54 6.54 Total: 0.00 -8.59 433.90 -10.29 -18.88 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -6.55 Total: -13.03 kcal Atomic # 6 Polarization: 3.61 SS G_CDS: -2.77 Total: 0.84 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -0.34 Total: 0.37 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -0.32 Total: -3.28 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.03 Total: -0.09 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: -6.86 Total: -10.21 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -8.59 -10.29 -18.88 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13422146_12496548.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.979 kcal (2) G-P(sol) polarization free energy of solvation -8.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.880 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds