Wall clock time and date at job start Sun Mar 7 2021 03:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37873 * 126.45833 * 2 1 4 4 C 1.46681 * 126.23113 * 359.97438 * 3 2 1 5 5 O 1.21694 * 120.00025 * 359.97438 * 4 3 2 6 6 N 1.34776 * 119.99898 * 179.97438 * 4 3 2 7 7 C 1.46497 * 119.99884 * 179.97438 * 6 4 3 8 8 C 1.50697 * 109.47450 * 180.02562 * 7 6 4 9 9 C 1.38346 * 119.85790 * 269.72887 * 8 7 6 10 10 C 1.37973 * 120.14374 * 179.75766 * 9 8 7 11 11 C 1.39535 * 119.85268 * 0.51333 * 10 9 8 12 12 C 1.43206 * 120.13944 * 179.72331 * 11 10 9 13 13 C 9.66602 * 150.54212 * 180.02562 * 3 1 2 14 14 Si 9.37333 * 173.97650 * 359.92704 * 6 1 2 15 15 C 1.86298 * 109.47247 * 354.31880 * 14 13 12 16 16 C 1.86301 * 109.47082 * 114.32117 * 14 13 12 17 17 C 1.86302 * 109.46868 * 234.31923 * 14 13 12 18 18 C 1.39532 * 119.71861 * 359.74093 * 11 10 9 19 19 C 1.37974 * 119.85812 * 0.02562 * 18 11 10 20 20 N 1.37645 * 107.53664 * 179.97438 * 3 2 1 21 21 C 1.35532 * 108.64316 * 0.02562 * 20 3 2 22 22 C 1.50702 * 125.56743 * 179.97438 * 21 20 3 23 23 O 1.42899 * 109.47019 * 120.02166 * 22 21 20 24 24 Si 1.86303 * 109.46764 * 0.02562 * 22 21 20 25 25 H 1.48504 * 109.47292 * 59.99968 * 24 22 21 26 26 H 1.48501 * 109.46972 * 179.97438 * 24 22 21 27 27 H 1.48494 * 109.47145 * 299.99810 * 24 22 21 28 28 C 1.35456 * 108.87181 * 359.74305 * 21 20 3 29 29 H 1.09002 * 109.47152 * 89.99880 * 1 2 3 30 30 H 1.09001 * 109.46980 * 329.99981 * 1 2 3 31 31 H 1.09004 * 109.47113 * 209.99962 * 1 2 3 32 32 H 0.96998 * 120.00173 * 0.02562 * 6 4 3 33 33 H 1.09001 * 109.47705 * 300.00498 * 7 6 4 34 34 H 1.09002 * 109.47155 * 60.00243 * 7 6 4 35 35 H 1.08007 * 119.92856 * 359.97438 * 9 8 7 36 36 H 1.07997 * 120.07290 * 180.23305 * 10 9 8 37 37 H 1.09005 * 109.46735 * 59.99919 * 15 14 13 38 38 H 1.08999 * 109.47366 * 179.97438 * 15 14 13 39 39 H 1.09003 * 109.47390 * 300.00232 * 15 14 13 40 40 H 1.08997 * 109.47253 * 59.99795 * 16 14 13 41 41 H 1.09001 * 109.46753 * 180.02562 * 16 14 13 42 42 H 1.08997 * 109.46763 * 300.00073 * 16 14 13 43 43 H 1.08998 * 109.47267 * 60.00605 * 17 14 13 44 44 H 1.09001 * 109.46998 * 179.97438 * 17 14 13 45 45 H 1.08997 * 109.47174 * 300.00026 * 17 14 13 46 46 H 1.08001 * 120.07187 * 179.97438 * 18 11 10 47 47 H 1.08001 * 119.93126 * 179.97438 * 19 18 11 48 48 H 0.96997 * 125.68157 * 179.97438 * 20 3 2 49 49 H 1.08998 * 109.47277 * 240.02754 * 22 21 20 50 50 H 0.96701 * 114.00488 * 299.99944 * 23 22 21 51 51 H 1.08006 * 126.06816 * 180.27918 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5093 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8037 3.4999 0.0001 7 6 2.3678 4.8985 -0.0010 8 6 3.5747 5.8009 -0.0007 9 6 4.1221 6.2186 1.1992 10 6 5.2301 7.0408 1.2064 11 6 5.7920 7.4597 -0.0001 12 6 6.9385 8.3178 0.0002 13 6 7.8783 9.0214 0.0021 14 14 9.3993 10.1601 0.0014 15 6 10.9439 9.1331 0.1751 16 6 9.4624 11.1110 -1.5994 17 6 9.2828 11.3527 1.4280 18 6 5.2320 7.0391 -1.2069 19 6 4.1269 6.2130 -1.2004 20 7 3.6284 0.6626 0.0006 21 6 3.6218 -0.6927 0.0004 22 6 4.8434 -1.5753 0.0003 23 8 4.8347 -2.4008 1.1667 24 14 6.3753 -0.5150 0.0013 25 1 6.3836 0.3417 1.2143 26 1 7.5791 -1.3846 0.0019 27 1 6.3844 0.3428 -1.2107 28 6 2.3380 -1.1246 0.0054 29 1 -0.3633 0.0000 -1.0277 30 1 -0.3633 0.8900 0.5138 31 1 -0.3633 -0.8900 0.5138 32 1 3.7500 3.2869 0.0005 33 1 1.7700 5.0922 -0.8917 34 1 1.7682 5.0929 0.8882 35 1 3.6833 5.8975 2.1325 36 1 5.6587 7.3631 2.1438 37 1 11.0120 8.4353 -0.6596 38 1 11.8165 9.7863 0.1742 39 1 10.9070 8.5767 1.1117 40 1 8.5587 11.7118 -1.7010 41 1 10.3353 11.7639 -1.5999 42 1 9.5305 10.4132 -2.4340 43 1 9.2459 10.7963 2.3646 44 1 10.1556 12.0056 1.4278 45 1 8.3791 11.9535 1.3264 46 1 5.6620 7.3602 -2.1441 47 1 3.6921 5.8871 -2.1338 48 1 4.4191 1.2244 0.0004 49 1 4.8373 -2.2041 -0.8900 50 1 4.8395 -1.9071 1.9981 51 1 2.0136 -2.1549 0.0108 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13422146_13940406.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:59:58 Heat of formation + Delta-G solvation = -7.747773 kcal Electronic energy + Delta-G solvation = -28930.263131 eV Core-core repulsion = 24919.197537 eV Total energy + Delta-G solvation = -4011.065594 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 370.163 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.60813 -40.82436 -39.89150 -37.81705 -36.41445 -34.48004 -33.56231 -32.16602 -32.00343 -31.02975 -29.68475 -28.52321 -28.51779 -28.32443 -27.88188 -26.19698 -23.83311 -23.18642 -22.35964 -21.59743 -20.41655 -19.85432 -19.56995 -18.01068 -17.28435 -16.95661 -16.88241 -16.61161 -16.27905 -16.07153 -15.91682 -15.55838 -15.01347 -14.82673 -14.59482 -14.55805 -14.44756 -14.34138 -14.23222 -14.10172 -14.04036 -13.86458 -13.60455 -13.47253 -13.41496 -13.41016 -13.37031 -13.20012 -12.96742 -12.70356 -12.61368 -12.46110 -12.42516 -12.21775 -12.17339 -12.11207 -11.66018 -11.08899 -10.93802 -10.78888 -10.65694 -10.28769 -10.12576 -9.77588 -9.54493 -9.14002 -0.32787 0.23514 0.33918 0.82512 1.11147 1.14678 1.30917 1.44911 1.53655 1.60663 1.64090 1.89075 1.99239 2.27864 2.27944 2.36782 2.37468 2.99219 3.25169 3.42260 3.57256 3.69898 3.76813 3.81507 3.84804 4.19975 4.21324 4.22876 4.31334 4.39633 4.54762 4.57383 4.60778 4.61041 4.65003 4.65591 4.65730 4.67630 4.79084 4.79889 4.88477 4.95479 5.05077 5.12853 5.18043 5.25602 5.34542 5.34772 5.37533 5.44174 5.44990 5.48642 5.68729 5.74183 5.94320 6.16961 6.37270 6.38596 6.63181 7.10949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.067 4.067 3 C -0.053 4.053 4 C 0.591 3.409 5 O -0.519 6.519 6 N -0.731 5.731 7 C 0.163 3.837 8 C -0.107 4.107 9 C -0.098 4.098 10 C -0.099 4.099 11 C 0.015 3.985 12 C -0.146 4.146 13 C -0.387 4.387 14 Si 1.144 2.856 15 C -0.453 4.453 16 C -0.453 4.453 17 C -0.453 4.453 18 C -0.099 4.099 19 C -0.098 4.098 20 N -0.542 5.542 21 C 0.013 3.987 22 C -0.049 4.049 23 O -0.529 6.529 24 Si 0.919 3.081 25 H -0.247 1.247 26 H -0.234 1.234 27 H -0.246 1.246 28 C -0.169 4.169 29 H 0.069 0.931 30 H 0.081 0.919 31 H 0.065 0.935 32 H 0.394 0.606 33 H 0.083 0.917 34 H 0.083 0.917 35 H 0.131 0.869 36 H 0.130 0.870 37 H 0.071 0.929 38 H 0.078 0.922 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.078 0.922 42 H 0.072 0.928 43 H 0.072 0.928 44 H 0.077 0.923 45 H 0.072 0.928 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.408 0.592 49 H 0.132 0.868 50 H 0.378 0.622 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.480 1.833 0.111 5.779 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.165 4.165 4 C 0.379 3.621 5 O -0.394 6.394 6 N -0.383 5.383 7 C 0.040 3.960 8 C -0.107 4.107 9 C -0.116 4.116 10 C -0.117 4.117 11 C 0.014 3.986 12 C -0.146 4.146 13 C -0.421 4.421 14 Si 1.329 2.671 15 C -0.560 4.560 16 C -0.560 4.560 17 C -0.560 4.560 18 C -0.117 4.117 19 C -0.116 4.116 20 N -0.142 5.142 21 C -0.103 4.103 22 C -0.162 4.162 23 O -0.333 6.333 24 Si 0.740 3.260 25 H -0.171 1.171 26 H -0.156 1.156 27 H -0.169 1.169 28 C -0.193 4.193 29 H 0.088 0.912 30 H 0.099 0.901 31 H 0.084 0.916 32 H 0.227 0.773 33 H 0.101 0.899 34 H 0.101 0.899 35 H 0.149 0.851 36 H 0.147 0.853 37 H 0.091 0.909 38 H 0.097 0.903 39 H 0.091 0.909 40 H 0.091 0.909 41 H 0.097 0.903 42 H 0.091 0.909 43 H 0.091 0.909 44 H 0.097 0.903 45 H 0.091 0.909 46 H 0.148 0.852 47 H 0.149 0.851 48 H 0.247 0.753 49 H 0.149 0.851 50 H 0.226 0.774 51 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 5.341 2.128 -0.328 5.759 hybrid contribution 0.293 0.203 0.336 0.490 sum 5.634 2.331 0.008 6.098 Atomic orbital electron populations 1.20394 0.88837 1.03213 1.02545 1.20057 0.96103 0.90496 1.00889 1.20142 0.83275 0.93419 1.19695 1.17026 0.85789 0.82885 0.76418 1.90853 1.15773 1.83084 1.49717 1.45971 1.09420 1.06053 1.76890 1.20234 0.93525 0.78261 1.03964 1.19969 0.97528 0.99649 0.93577 1.21063 0.95556 0.97158 0.97856 1.21264 0.95801 0.97281 0.97346 1.16259 0.92395 0.96108 0.93804 1.20969 0.95390 0.97770 1.00483 1.36113 1.04349 1.02001 0.99626 0.77014 0.59630 0.63041 0.67380 1.26121 1.15127 1.09721 1.05066 1.26116 1.05002 1.08793 1.16135 1.26117 1.05077 1.11023 1.13829 1.21265 0.95840 0.97233 0.97347 1.21064 0.95566 0.97131 0.97869 1.42019 1.07164 1.06540 1.58492 1.20925 0.98030 0.82439 1.08909 1.24433 1.00391 0.98456 0.92880 1.86572 1.96772 1.34870 1.15132 0.86115 0.78645 0.79503 0.81735 1.17075 1.15602 1.16935 1.20640 0.90360 0.99165 1.09167 0.91212 0.90055 0.91616 0.77263 0.89915 0.89913 0.85091 0.85252 0.90937 0.90337 0.90928 0.90878 0.90341 0.90927 0.90922 0.90346 0.90878 0.85247 0.85084 0.75325 0.85082 0.77423 0.83311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.83 36.01 0.35 0.15 16 2 C -0.07 -0.17 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.11 7.06 -81.98 -0.58 -0.69 16 4 C 0.59 1.58 7.79 -12.85 -0.10 1.48 16 5 O -0.52 -3.00 14.80 5.19 0.08 -2.92 16 6 N -0.73 0.11 5.54 -62.80 -0.35 -0.24 16 7 C 0.16 -0.05 5.79 -5.20 -0.03 -0.08 16 8 C -0.11 0.06 5.25 -104.54 -0.55 -0.49 16 9 C -0.10 0.04 9.68 -39.64 -0.38 -0.34 16 10 C -0.10 -0.07 9.75 -39.20 -0.38 -0.45 16 11 C 0.01 0.03 5.72 -107.00 -0.61 -0.58 16 12 C -0.15 -0.42 13.24 -38.83 -0.51 -0.93 16 13 C -0.39 -0.47 12.14 29.55 0.36 -0.11 16 14 Si 1.14 -3.44 14.26 -169.99 -2.42 -5.87 16 15 C -0.45 1.11 8.65 101.05 0.87 1.99 16 16 C -0.45 1.09 8.65 101.05 0.87 1.96 16 17 C -0.45 1.08 8.65 101.05 0.87 1.95 16 18 C -0.10 -0.07 9.75 -39.20 -0.38 -0.46 16 19 C -0.10 0.04 9.68 -39.64 -0.38 -0.34 16 20 N -0.54 0.20 5.47 -5.69 -0.03 0.17 16 21 C 0.01 0.00 6.12 -81.95 -0.50 -0.50 16 22 C -0.05 0.09 2.99 36.01 0.11 0.20 16 23 O -0.53 0.48 12.87 -35.23 -0.45 0.03 16 24 Si 0.92 -2.22 26.24 -169.99 -4.46 -6.68 16 25 H -0.25 0.59 7.11 56.52 0.40 0.99 16 26 H -0.23 0.21 7.11 56.52 0.40 0.61 16 27 H -0.25 0.51 7.11 56.52 0.40 0.91 16 28 C -0.17 -0.23 10.64 -39.98 -0.43 -0.65 16 29 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 30 H 0.08 0.30 6.49 -51.93 -0.34 -0.04 16 31 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.39 -0.84 7.59 -40.82 -0.31 -1.15 16 33 H 0.08 0.01 8.08 -51.93 -0.42 -0.41 16 34 H 0.08 0.00 8.08 -51.93 -0.42 -0.42 16 35 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 36 H 0.13 -0.04 8.06 -52.49 -0.42 -0.47 16 37 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 38 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 39 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 40 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 42 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 43 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 45 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 46 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 47 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 48 H 0.41 -1.07 5.98 -40.82 -0.24 -1.31 16 49 H 0.13 -0.35 7.96 -51.93 -0.41 -0.76 16 50 H 0.38 -1.48 8.70 45.56 0.40 -1.09 16 51 H 0.15 0.07 8.06 -52.48 -0.42 -0.35 16 LS Contribution 439.23 15.07 6.62 6.62 Total: 0.00 -8.63 439.23 -10.29 -18.92 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -7.22 Total: -11.29 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: -2.05 Total: 1.26 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.38 Total: -0.07 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.38 Total: -2.90 kcal Atomic # 14 Polarization: -5.66 SS G_CDS: -6.89 Total: -12.55 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -8.63 -10.29 -18.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13422146_13940406.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.170 kcal (2) G-P(sol) polarization free energy of solvation -8.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds