Wall clock time and date at job start Sun Mar 7 2021 04:16:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.37641 * 125.67133 * 2 1 4 4 C 1.46670 * 126.23046 * 0.02562 * 3 2 1 5 5 O 1.21700 * 119.99555 * 3.94755 * 4 3 2 6 6 N 1.34767 * 120.00578 * 183.93908 * 4 3 2 7 7 C 1.46501 * 120.00515 * 174.64108 * 6 4 3 8 8 C 1.50698 * 109.47562 * 180.02562 * 7 6 4 9 9 C 1.38340 * 119.85886 * 89.99557 * 8 7 6 10 10 C 1.37976 * 120.14372 * 180.02562 * 9 8 7 11 11 C 1.39528 * 119.85345 * 359.97438 * 10 9 8 12 12 C 1.43200 * 120.14203 * 179.97438 * 11 10 9 13 13 C 9.66392 * 150.33301 * 173.67521 * 3 1 2 14 14 Si 9.37195 * 173.31059 * 20.63441 * 6 1 2 15 15 C 1.86300 * 109.47048 * 289.16389 * 14 13 12 16 16 C 1.86290 * 109.47170 * 49.16704 * 14 13 12 17 17 C 1.86302 * 109.47016 * 169.16699 * 14 13 12 18 18 C 1.39534 * 119.72219 * 0.25274 * 11 10 9 19 19 C 1.37981 * 119.85257 * 359.51708 * 18 11 10 20 20 C 1.37886 * 107.54719 * 179.75796 * 3 2 1 21 21 C 1.39879 * 107.09149 * 0.23883 * 20 3 2 22 22 Br 1.89097 * 126.07384 * 179.97438 * 21 20 3 23 23 C 1.35501 * 107.85432 * 0.02562 * 21 20 3 24 24 C 1.50700 * 125.57305 * 179.97438 * 23 21 20 25 25 O 1.42907 * 109.47106 * 122.93953 * 24 23 21 26 26 Si 1.86302 * 109.47246 * 242.93913 * 24 23 21 27 27 H 1.48493 * 109.47393 * 292.65516 * 26 24 23 28 28 H 1.48497 * 109.46803 * 52.65632 * 26 24 23 29 29 H 1.48498 * 109.46869 * 172.65588 * 26 24 23 30 30 H 1.08994 * 109.46964 * 84.19613 * 1 2 3 31 31 H 1.09004 * 109.46605 * 204.19606 * 1 2 3 32 32 H 1.08999 * 109.47023 * 324.19327 * 1 2 3 33 33 H 0.97001 * 120.00013 * 354.64367 * 6 4 3 34 34 H 1.08998 * 109.47079 * 60.00075 * 7 6 4 35 35 H 1.08999 * 109.47247 * 300.00717 * 7 6 4 36 36 H 1.08000 * 119.92633 * 0.02646 * 9 8 7 37 37 H 1.08001 * 120.06997 * 179.97438 * 10 9 8 38 38 H 1.08999 * 109.47253 * 60.00173 * 15 14 13 39 39 H 1.08997 * 109.46930 * 180.02562 * 15 14 13 40 40 H 1.09002 * 109.47356 * 300.00187 * 15 14 13 41 41 H 1.08997 * 109.47524 * 60.00288 * 16 14 13 42 42 H 1.09009 * 109.47151 * 179.97438 * 16 14 13 43 43 H 1.09005 * 109.47316 * 299.99700 * 16 14 13 44 44 H 1.09000 * 109.47345 * 59.99194 * 17 14 13 45 45 H 1.08999 * 109.47178 * 180.02562 * 17 14 13 46 46 H 1.09001 * 109.46927 * 299.99828 * 17 14 13 47 47 H 1.08000 * 120.07540 * 179.71930 * 18 11 10 48 48 H 1.08000 * 119.92670 * 180.23418 * 19 18 11 49 49 H 1.08000 * 126.45349 * 180.27578 * 20 3 2 50 50 H 1.09000 * 109.47297 * 2.94390 * 24 23 21 51 51 H 0.96699 * 114.00208 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8121 2.5123 0.0005 5 8 0.6236 2.7640 0.0736 6 7 2.7094 3.5146 -0.0797 7 6 2.2506 4.9009 -0.1976 8 6 3.4425 5.8202 -0.2703 9 6 3.9917 6.1400 -1.4991 10 6 5.0834 6.9806 -1.5725 11 6 5.6331 7.5088 -0.4039 12 6 6.7664 8.3814 -0.4728 13 6 7.6966 9.0957 -0.5269 14 14 9.2007 10.2531 -0.6173 15 6 10.1064 10.2226 1.0103 16 6 10.3425 9.6828 -1.9743 17 6 8.6276 11.9890 -0.9766 18 6 5.0774 7.1785 0.8327 19 6 3.9828 6.3405 0.8921 20 6 3.5781 0.6892 0.0056 21 6 3.5530 -0.7093 0.0033 22 35 5.0610 -1.8501 0.0081 23 6 2.2560 -1.1015 -0.0040 24 6 1.7715 -2.5285 -0.0091 25 8 0.9190 -2.7462 1.1169 26 14 0.8231 -2.8567 -1.5787 27 1 -0.4345 -2.0672 -1.5715 28 1 1.6490 -2.4614 -2.7478 29 1 0.4990 -4.3031 -1.6679 30 1 -0.3633 0.1039 -1.0224 31 1 -0.3633 -0.9374 0.4212 32 1 -0.3633 0.8334 0.6012 33 1 3.6591 3.3182 -0.0595 34 1 1.6453 5.1584 0.6715 35 1 1.6523 5.0100 -1.1021 36 1 3.5650 5.7308 -2.4029 37 1 5.5114 7.2292 -2.5324 38 1 10.4417 9.2070 1.2206 39 1 10.9690 10.8870 0.9586 40 1 9.4383 10.5564 1.8043 41 1 9.8126 9.7007 -2.9266 42 1 11.2052 10.3471 -2.0265 43 1 10.6778 8.6671 -1.7641 44 1 7.9594 12.3228 -0.1828 45 1 9.4905 12.6530 -1.0290 46 1 8.0977 12.0069 -1.9290 47 1 5.5012 7.5805 1.7412 48 1 3.5495 6.0872 1.8484 49 1 4.4582 1.3152 0.0112 50 1 2.6263 -3.2025 0.0467 51 1 0.5698 -3.6459 1.1777 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13422146_5000100.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:16:33 Heat of formation + Delta-G solvation = 6.323687 kcal Electronic energy + Delta-G solvation = -30935.977060 eV Core-core repulsion = 26585.703647 eV Total energy + Delta-G solvation = -4350.273413 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 448.073 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.76506 -40.79881 -39.89385 -37.87124 -36.38637 -34.62781 -34.12152 -32.46445 -32.09015 -31.37181 -30.83906 -29.63784 -28.47392 -28.47184 -27.99787 -27.30452 -26.13605 -23.76094 -23.26640 -22.74679 -21.46408 -20.39282 -19.50419 -18.99067 -18.69709 -17.30530 -17.09188 -17.00230 -16.61420 -16.32440 -16.05266 -15.93294 -15.50075 -15.23346 -14.88125 -14.60280 -14.54135 -14.42220 -14.30151 -14.28345 -14.26509 -14.14508 -14.05297 -13.95486 -13.81036 -13.61967 -13.36770 -13.36428 -13.19795 -13.15184 -12.87119 -12.65237 -12.36939 -12.35162 -12.16268 -12.05590 -12.01014 -11.80768 -11.59956 -11.26554 -11.02893 -10.91649 -10.73667 -10.72191 -10.24039 -10.04708 -9.71173 -9.47979 -9.18240 -0.26136 0.20922 0.31558 0.71730 0.84559 1.16000 1.26800 1.36518 1.41551 1.44299 1.59069 1.63127 1.76319 2.17215 2.26491 2.32920 2.33585 2.49982 3.03758 3.06414 3.47493 3.54838 3.66208 3.76412 3.84046 3.86018 3.92004 4.02273 4.26329 4.27715 4.30005 4.32912 4.48299 4.57505 4.60916 4.65613 4.65774 4.68098 4.69948 4.70256 4.70343 4.72149 4.76387 4.85292 4.95846 5.19272 5.24324 5.34838 5.39458 5.41931 5.44319 5.49232 5.49341 5.68131 5.81459 5.89685 6.32745 6.37405 6.69657 7.08081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.385 5.385 3 C -0.035 4.035 4 C 0.593 3.407 5 O -0.540 6.540 6 N -0.714 5.714 7 C 0.165 3.835 8 C -0.106 4.106 9 C -0.096 4.096 10 C -0.099 4.099 11 C 0.015 3.985 12 C -0.145 4.145 13 C -0.388 4.388 14 Si 1.143 2.857 15 C -0.452 4.452 16 C -0.452 4.452 17 C -0.453 4.453 18 C -0.099 4.099 19 C -0.096 4.096 20 C -0.109 4.109 21 C -0.160 4.160 22 Br -0.020 7.020 23 C 0.091 3.909 24 C -0.062 4.062 25 O -0.543 6.543 26 Si 0.928 3.072 27 H -0.240 1.240 28 H -0.240 1.240 29 H -0.239 1.239 30 H 0.080 0.920 31 H 0.100 0.900 32 H 0.107 0.893 33 H 0.406 0.594 34 H 0.083 0.917 35 H 0.081 0.919 36 H 0.131 0.869 37 H 0.129 0.871 38 H 0.072 0.928 39 H 0.077 0.923 40 H 0.072 0.928 41 H 0.072 0.928 42 H 0.077 0.923 43 H 0.072 0.928 44 H 0.072 0.928 45 H 0.077 0.923 46 H 0.072 0.928 47 H 0.129 0.871 48 H 0.131 0.869 49 H 0.156 0.844 50 H 0.098 0.902 51 H 0.387 0.613 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.143 0.068 -1.115 2.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.057 5.057 3 C -0.150 4.150 4 C 0.381 3.619 5 O -0.418 6.418 6 N -0.366 5.366 7 C 0.042 3.958 8 C -0.106 4.106 9 C -0.115 4.115 10 C -0.117 4.117 11 C 0.015 3.985 12 C -0.145 4.145 13 C -0.423 4.423 14 Si 1.328 2.672 15 C -0.560 4.560 16 C -0.560 4.560 17 C -0.560 4.560 18 C -0.117 4.117 19 C -0.115 4.115 20 C -0.136 4.136 21 C -0.245 4.245 22 Br 0.064 6.936 23 C -0.030 4.030 24 C -0.173 4.173 25 O -0.349 6.349 26 Si 0.747 3.253 27 H -0.163 1.163 28 H -0.162 1.162 29 H -0.162 1.162 30 H 0.099 0.901 31 H 0.118 0.882 32 H 0.126 0.874 33 H 0.241 0.759 34 H 0.101 0.899 35 H 0.100 0.900 36 H 0.149 0.851 37 H 0.147 0.853 38 H 0.091 0.909 39 H 0.096 0.904 40 H 0.091 0.909 41 H 0.091 0.909 42 H 0.096 0.904 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.096 0.904 46 H 0.091 0.909 47 H 0.147 0.853 48 H 0.149 0.851 49 H 0.174 0.826 50 H 0.116 0.884 51 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges 0.972 0.266 -1.726 1.999 hybrid contribution 0.065 -0.520 0.382 0.648 sum 1.038 -0.253 -1.344 1.717 Atomic orbital electron populations 1.22625 0.74872 1.06417 1.04554 1.43724 1.07256 1.03835 1.50932 1.19960 0.89741 0.87736 1.17536 1.16809 0.85599 0.83154 0.76353 1.90835 1.16031 1.84681 1.50291 1.45674 1.10064 1.05719 1.75179 1.20233 0.93597 0.78313 1.03649 1.19916 0.97625 0.99463 0.93645 1.21045 0.95593 0.97373 0.97458 1.21252 0.95946 0.96732 0.97741 1.16256 0.92567 0.95876 0.93845 1.20977 0.95486 0.97613 1.00378 1.36088 1.04227 1.02206 0.99734 0.77026 0.59875 0.62921 0.67350 1.26114 1.08376 1.04982 1.16553 1.26116 1.10442 1.06483 1.12986 1.26120 1.06498 1.17880 1.05542 1.21259 0.95868 0.97635 0.96902 1.21056 0.95590 0.96590 0.98215 1.21193 0.95172 0.92937 1.04330 1.20693 0.90929 0.94370 1.18536 1.96662 1.35739 1.62964 1.98214 1.19493 0.89023 0.87827 1.06652 1.24370 0.99615 0.92689 1.00585 1.86479 1.66199 1.36136 1.46126 0.86049 0.80761 0.82267 0.76253 1.16301 1.16222 1.16194 0.90133 0.88157 0.87442 0.75876 0.89905 0.90046 0.85102 0.85276 0.90885 0.90371 0.90905 0.90911 0.90370 0.90883 0.90898 0.90372 0.90910 0.85267 0.85078 0.82595 0.88414 0.76432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.07 8.57 59.85 0.51 0.59 16 2 N -0.39 -0.99 3.12 -115.59 -0.36 -1.35 16 3 C -0.04 -0.09 6.89 -81.98 -0.56 -0.65 16 4 C 0.59 1.53 7.77 -12.86 -0.10 1.43 16 5 O -0.54 -2.86 14.79 5.19 0.08 -2.79 16 6 N -0.71 0.06 5.53 -62.80 -0.35 -0.28 16 7 C 0.16 -0.06 5.80 -5.19 -0.03 -0.09 16 8 C -0.11 0.05 5.25 -104.55 -0.55 -0.50 16 9 C -0.10 0.03 9.68 -39.64 -0.38 -0.35 16 10 C -0.10 -0.09 9.75 -39.20 -0.38 -0.48 16 11 C 0.01 0.03 5.72 -107.01 -0.61 -0.58 16 12 C -0.14 -0.46 13.24 -38.84 -0.51 -0.98 16 13 C -0.39 -0.60 12.15 29.55 0.36 -0.24 16 14 Si 1.14 -3.08 14.26 -169.99 -2.42 -5.50 16 15 C -0.45 0.98 8.65 101.05 0.87 1.85 16 16 C -0.45 0.98 8.65 101.05 0.87 1.86 16 17 C -0.45 0.95 8.65 101.05 0.87 1.82 16 18 C -0.10 -0.10 9.75 -39.19 -0.38 -0.48 16 19 C -0.10 0.02 9.68 -39.64 -0.38 -0.36 16 20 C -0.11 -0.15 10.34 -39.10 -0.40 -0.55 16 21 C -0.16 -0.35 6.53 -39.95 -0.26 -0.61 16 22 Br -0.02 -0.03 33.05 -68.01 -2.25 -2.28 16 23 C 0.09 0.20 5.17 -81.91 -0.42 -0.23 16 24 C -0.06 0.01 2.78 36.01 0.10 0.11 16 25 O -0.54 0.42 11.43 -35.23 -0.40 0.02 16 26 Si 0.93 -0.69 26.51 -169.99 -4.51 -5.20 16 27 H -0.24 0.10 6.11 56.52 0.35 0.45 16 28 H -0.24 -0.19 7.11 56.52 0.40 0.21 16 29 H -0.24 0.31 7.11 56.52 0.40 0.71 16 30 H 0.08 0.05 7.77 -51.93 -0.40 -0.36 16 31 H 0.10 0.01 5.72 -51.93 -0.30 -0.29 16 32 H 0.11 0.24 6.57 -51.93 -0.34 -0.11 16 33 H 0.41 -0.73 7.36 -40.82 -0.30 -1.03 16 34 H 0.08 0.00 8.08 -51.93 -0.42 -0.42 16 35 H 0.08 -0.02 8.08 -51.93 -0.42 -0.44 16 36 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 37 H 0.13 -0.01 8.06 -52.49 -0.42 -0.44 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 39 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 41 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 42 H 0.08 -0.22 7.96 -51.92 -0.41 -0.64 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 45 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 46 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 47 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 49 H 0.16 -0.18 7.45 -52.49 -0.39 -0.57 16 50 H 0.10 -0.12 6.95 -51.93 -0.36 -0.48 16 51 H 0.39 -2.09 8.74 45.56 0.40 -1.69 16 LS Contribution 454.66 15.07 6.85 6.85 Total: 0.00 -8.77 454.66 -11.56 -20.33 By element: Atomic # 1 Polarization: -4.56 SS G_CDS: -6.80 Total: -11.36 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -1.40 Total: 1.56 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.71 Total: -1.64 kcal Atomic # 8 Polarization: -2.44 SS G_CDS: -0.33 Total: -2.77 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: -6.93 Total: -10.70 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 6.85 Total: 6.85 kcal Total: -8.77 -11.56 -20.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13422146_5000100.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.653 kcal (2) G-P(sol) polarization free energy of solvation -8.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.329 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.324 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds