Wall clock time and date at job start Sun Mar 7 2021 00:04:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42906 * 109.47017 * 2 1 4 4 C 1.35902 * 116.99578 * 84.70446 * 3 2 1 5 5 C 1.38734 * 120.05617 * 174.63604 * 4 3 2 6 6 C 1.38144 * 119.94761 * 179.72767 * 5 4 3 7 7 C 1.38263 * 120.05121 * 0.25056 * 6 5 4 8 8 C 1.50702 * 119.94383 * 179.97438 * 7 6 5 9 9 O 1.42899 * 109.47167 * 300.00925 * 8 7 6 10 10 Si 1.86290 * 109.47540 * 180.02562 * 8 7 6 11 11 C 1.38261 * 120.11754 * 0.02562 * 7 6 5 12 12 C 1.38151 * 120.05164 * 359.97438 * 11 7 6 13 13 C 1.50703 * 109.46785 * 240.00705 * 2 1 3 14 14 O 1.21284 * 120.00253 * 120.00103 * 13 2 1 15 15 N 1.34773 * 119.99946 * 299.99227 * 13 2 1 16 16 C 1.46500 * 119.99956 * 180.02562 * 15 13 2 17 17 H 1.08993 * 112.84883 * 23.80932 * 16 15 13 18 18 C 1.53785 * 113.61161 * 155.00601 * 16 15 13 19 19 C 1.53782 * 87.08280 * 89.11505 * 18 16 15 20 20 H 1.08994 * 113.61231 * 270.79732 * 19 18 16 21 21 C 1.50699 * 113.61483 * 139.98030 * 19 18 16 22 22 C 1.38449 * 119.98984 * 119.72092 * 21 19 18 23 23 F 1.35099 * 120.00947 * 0.02600 * 22 21 19 24 24 C 1.38437 * 119.97658 * 179.76569 * 22 21 19 25 25 C 1.38399 * 119.94677 * 0.49373 * 24 22 21 26 26 F 1.35101 * 120.00915 * 179.78729 * 25 24 22 27 27 C 1.38492 * 119.97492 * 359.76260 * 25 24 22 28 28 C 1.38180 * 120.02680 * 359.97438 * 27 25 24 29 29 C 1.53783 * 87.08199 * 25.43049 * 19 18 16 30 30 H 1.09004 * 109.47516 * 59.99500 * 1 2 3 31 31 H 1.08995 * 109.47195 * 180.02562 * 1 2 3 32 32 H 1.09007 * 109.46713 * 299.99634 * 1 2 3 33 33 H 1.08991 * 109.47357 * 120.00284 * 2 1 3 34 34 H 1.07999 * 120.02566 * 0.02562 * 5 4 3 35 35 H 1.07997 * 119.97270 * 180.23339 * 6 5 4 36 36 H 1.09007 * 109.46983 * 59.99664 * 8 7 6 37 37 H 0.96702 * 113.99421 * 299.99221 * 9 8 7 38 38 H 1.48496 * 109.99975 * 58.68007 * 10 8 7 39 39 H 1.48497 * 110.00445 * 180.02562 * 10 8 7 40 40 H 1.07999 * 119.97520 * 179.97438 * 11 7 6 41 41 H 1.08007 * 120.02409 * 180.02562 * 12 11 7 42 42 H 0.97003 * 119.99754 * 0.02562 * 15 13 2 43 43 H 1.09002 * 113.61223 * 203.66630 * 18 16 15 44 44 H 1.09003 * 113.61430 * 334.47987 * 18 16 15 45 45 H 1.08003 * 120.02722 * 180.25272 * 24 22 21 46 46 H 1.08002 * 119.98176 * 179.97438 * 27 25 24 47 47 H 1.08000 * 119.97674 * 179.97438 * 28 27 25 48 48 H 1.08995 * 113.61417 * 220.02071 * 29 19 18 49 49 H 1.08996 * 113.61398 * 89.11520 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1065 1.9662 1.2058 5 6 2.6655 3.2330 1.2923 6 6 2.7611 3.8623 2.5183 7 6 2.3051 3.2286 3.6593 8 6 2.4112 3.9171 4.9957 9 8 3.7834 4.1965 5.2800 10 14 1.7159 2.8092 6.3221 11 6 1.7529 1.9637 3.5767 12 6 1.6550 1.3301 2.3530 13 6 2.0322 -0.7103 -1.2306 14 8 2.7295 -0.1208 -2.0289 15 7 1.7067 -2.0006 -1.4439 16 6 2.1954 -2.6912 -2.6399 17 1 3.1009 -2.2420 -3.0477 18 6 2.2848 -4.2178 -2.4764 19 6 0.8301 -4.2771 -2.9715 20 1 0.0933 -4.1982 -2.1722 21 6 0.5573 -5.4263 -3.9075 22 6 -0.3864 -6.3824 -3.5729 23 9 -1.0632 -6.2849 -2.4077 24 6 -0.6402 -7.4353 -4.4351 25 6 0.0574 -7.5364 -5.6262 26 9 -0.1862 -8.5658 -6.4666 27 6 1.0048 -6.5818 -5.9564 28 6 1.2534 -5.5283 -5.0975 29 6 1.1040 -2.9468 -3.6928 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 1.8933 -0.5138 0.8899 34 1 3.0211 3.7288 0.4011 35 1 3.1927 4.8501 2.5856 36 1 1.8484 4.8503 4.9693 37 1 4.3450 3.4102 5.3188 38 1 2.4545 1.5212 6.3469 39 1 1.8140 3.4770 7.6448 40 1 1.3978 1.4706 4.4695 41 1 1.2231 0.3422 2.2889 42 1 1.1488 -2.4720 -0.8055 43 1 2.9964 -4.6886 -3.1546 44 1 2.4090 -4.5396 -1.4424 45 1 -1.3792 -8.1793 -4.1768 46 1 1.5495 -6.6608 -6.8856 47 1 1.9927 -4.7845 -5.3556 48 1 0.2736 -2.2428 -3.6407 49 1 1.4929 -3.0702 -4.7036 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:04:40 Heat of formation + Delta-G solvation = -105.927654 kcal Electronic energy + Delta-G solvation = -34649.129295 eV Core-core repulsion = 29566.311173 eV Total energy + Delta-G solvation = -5082.818123 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -50.10391 -50.03600 -41.99485 -41.37467 -40.32077 -39.27619 -38.58034 -37.24343 -34.95759 -33.30393 -32.06093 -31.90987 -31.66526 -31.23626 -26.97678 -26.90686 -26.46959 -25.44705 -24.44643 -24.07545 -23.04442 -22.49182 -21.58043 -20.48088 -19.59017 -19.40409 -18.69604 -18.32581 -18.17345 -17.51238 -17.08858 -17.02984 -16.87940 -16.83729 -16.65532 -16.39502 -16.36534 -16.18610 -15.72393 -15.68341 -15.56643 -15.42290 -15.31919 -14.85309 -14.66903 -14.50329 -14.18310 -14.10791 -13.96875 -13.78077 -13.66650 -13.60712 -13.50324 -13.38986 -12.97974 -12.92311 -12.69206 -12.26568 -12.25285 -12.16579 -12.07341 -11.91235 -11.61662 -11.51664 -10.89326 -10.59600 -10.29349 -10.19545 -10.05473 -9.69477 -9.22737 -4.99144 -0.22427 -0.14701 0.26573 0.27986 1.27401 1.34777 1.43328 1.56630 1.94739 2.15986 2.38000 2.63608 2.73900 3.12306 3.28048 3.30598 3.34486 3.37154 3.44077 3.49392 3.50485 3.62895 3.66397 3.69413 3.75821 3.79765 3.84150 3.87757 4.01735 4.17792 4.26319 4.37287 4.40212 4.47042 4.47602 4.53150 4.56616 4.61667 4.65206 4.67089 4.72137 4.78166 4.80205 4.85253 4.88969 4.92508 4.93642 5.09421 5.14938 5.23581 5.36894 5.48414 5.61223 5.66768 6.16932 6.32764 6.40441 7.00670 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.146 4.146 6 C -0.051 4.051 7 C -0.156 4.156 8 C -0.070 4.070 9 O -0.530 6.530 10 Si 0.681 3.319 11 C -0.075 4.075 12 C -0.208 4.208 13 C 0.522 3.478 14 O -0.509 6.509 15 N -0.710 5.710 16 C 0.121 3.879 17 H 0.110 0.890 18 C -0.134 4.134 19 C -0.075 4.075 20 H 0.104 0.896 21 C -0.116 4.116 22 C 0.133 3.867 23 F -0.129 7.129 24 C -0.190 4.190 25 C 0.128 3.872 26 F -0.130 7.130 27 C -0.159 4.159 28 C -0.060 4.060 29 C -0.142 4.142 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.080 0.920 33 H 0.102 0.898 34 H 0.135 0.865 35 H 0.134 0.866 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.130 0.870 41 H 0.133 0.867 42 H 0.403 0.597 43 H 0.102 0.898 44 H 0.080 0.920 45 H 0.149 0.851 46 H 0.145 0.855 47 H 0.146 0.854 48 H 0.079 0.921 49 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.825 -3.166 1.054 4.372 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.164 4.164 6 C -0.069 4.069 7 C -0.156 4.156 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.583 3.417 11 C -0.092 4.092 12 C -0.227 4.227 13 C 0.307 3.693 14 O -0.382 6.382 15 N -0.364 5.364 16 C 0.016 3.984 17 H 0.128 0.872 18 C -0.172 4.172 19 C -0.093 4.093 20 H 0.122 0.878 21 C -0.117 4.117 22 C 0.114 3.886 23 F -0.107 7.107 24 C -0.209 4.209 25 C 0.108 3.892 26 F -0.108 7.108 27 C -0.178 4.178 28 C -0.078 4.078 29 C -0.181 4.181 30 H 0.096 0.904 31 H 0.098 0.902 32 H 0.099 0.901 33 H 0.119 0.881 34 H 0.153 0.847 35 H 0.152 0.848 36 H 0.136 0.864 37 H 0.223 0.777 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.147 0.853 41 H 0.151 0.849 42 H 0.238 0.762 43 H 0.120 0.880 44 H 0.099 0.901 45 H 0.167 0.833 46 H 0.163 0.837 47 H 0.163 0.837 48 H 0.097 0.903 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.356 -2.501 1.041 3.590 hybrid contribution 0.478 -0.928 0.225 1.067 sum -1.878 -3.429 1.266 4.109 Atomic orbital electron populations 1.22376 0.92198 1.03952 1.05069 1.22184 0.95980 0.83328 0.97891 1.86229 1.80900 1.25337 1.27101 1.19081 0.95155 0.92802 0.83928 1.20544 1.03249 0.93592 0.99055 1.20860 0.95985 0.99565 0.90460 1.20194 1.03637 0.95611 0.96178 1.24955 0.86831 1.07315 0.98879 1.86601 1.18121 1.36229 1.92712 0.95131 0.91042 0.77555 0.77982 1.20781 0.97333 0.94038 0.97086 1.21202 1.07372 1.01729 0.92385 1.20093 0.80410 0.81874 0.86958 1.90784 1.36056 1.65372 1.45940 1.45528 1.54109 1.11470 1.25254 1.21853 0.98363 0.92463 0.85708 0.87225 1.23455 0.95887 0.94807 1.03076 1.21561 0.98126 0.92308 0.97331 0.87797 1.19785 0.97603 0.96955 0.97314 1.17131 0.93226 0.95427 0.82825 1.91526 1.78229 1.95772 1.45198 1.21086 1.04278 1.00920 0.94664 1.17345 0.96841 0.86490 0.88485 1.91563 1.93259 1.56314 1.69684 1.21263 0.99364 0.94915 1.02224 1.20778 0.98140 0.97057 0.91812 1.23589 0.99656 0.95822 0.99002 0.90368 0.90206 0.90082 0.88072 0.84664 0.84772 0.86434 0.77676 1.18607 1.18233 0.85280 0.84925 0.76240 0.87974 0.90132 0.83293 0.83729 0.83662 0.90266 0.88313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.57 9.06 37.16 0.34 0.91 16 2 C 0.07 -0.07 2.65 -27.88 -0.07 -0.14 16 3 O -0.28 -0.68 9.33 -39.34 -0.37 -1.05 16 4 C 0.14 0.19 6.60 -39.22 -0.26 -0.07 16 5 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 6 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 7 C -0.16 0.00 5.39 -104.60 -0.56 -0.57 16 8 C -0.07 0.03 2.82 36.01 0.10 0.13 16 9 O -0.53 -0.64 12.77 -35.23 -0.45 -1.09 16 10 Si 0.68 -0.83 29.78 -169.99 -5.06 -5.89 16 11 C -0.07 0.06 8.66 -39.60 -0.34 -0.28 16 12 C -0.21 0.13 8.24 -39.43 -0.32 -0.19 16 13 C 0.52 0.40 7.23 -10.99 -0.08 0.32 16 14 O -0.51 -2.86 16.10 -14.36 -0.23 -3.09 16 15 N -0.71 1.79 5.16 -53.01 -0.27 1.52 16 16 C 0.12 -0.28 4.32 -67.11 -0.29 -0.57 16 17 H 0.11 -0.07 7.46 -51.93 -0.39 -0.45 16 18 C -0.13 0.50 7.29 -25.92 -0.19 0.31 16 19 C -0.07 0.23 3.78 -90.96 -0.34 -0.11 16 20 H 0.10 -0.34 7.45 -51.93 -0.39 -0.72 16 21 C -0.12 0.20 5.29 -104.55 -0.55 -0.35 16 22 C 0.13 -0.04 7.24 -39.43 -0.29 -0.32 16 23 F -0.13 -0.06 16.36 2.25 0.04 -0.02 16 24 C -0.19 0.03 10.01 -39.45 -0.39 -0.36 16 25 C 0.13 0.01 7.30 -39.43 -0.29 -0.28 16 26 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 27 C -0.16 0.25 10.02 -39.51 -0.40 -0.14 16 28 C -0.06 0.15 8.61 -39.60 -0.34 -0.19 16 29 C -0.14 0.41 7.25 -25.92 -0.19 0.22 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.08 -0.45 7.56 -51.93 -0.39 -0.84 16 32 H 0.08 -0.29 6.91 -51.93 -0.36 -0.64 16 33 H 0.10 -0.33 6.31 -51.93 -0.33 -0.65 16 34 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 35 H 0.13 0.00 8.06 -52.49 -0.42 -0.43 16 36 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 37 H 0.38 -0.57 8.70 45.56 0.40 -0.17 16 38 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 39 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 40 H 0.13 -0.36 4.87 -52.49 -0.26 -0.61 16 41 H 0.13 -0.42 5.43 -52.48 -0.29 -0.70 16 42 H 0.40 -2.13 8.12 -40.82 -0.33 -2.46 16 43 H 0.10 -0.43 7.72 -51.93 -0.40 -0.83 16 44 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 45 H 0.15 -0.17 8.06 -52.48 -0.42 -0.60 16 46 H 0.14 -0.46 8.06 -52.49 -0.42 -0.88 16 47 H 0.15 -0.68 6.65 -52.49 -0.35 -1.03 16 48 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 49 H 0.10 -0.35 6.31 -51.93 -0.33 -0.68 16 LS Contribution 410.46 15.07 6.19 6.19 Total: 0.00 -9.32 410.46 -11.35 -20.67 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -5.98 Total: -14.36 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -5.25 Total: -2.72 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -0.27 Total: 1.52 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -1.05 Total: -5.23 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.08 Total: -0.18 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.06 Total: -5.89 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -9.32 -11.35 -20.67 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.259 kcal (2) G-P(sol) polarization free energy of solvation -9.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.669 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds