Wall clock time and date at job start Sun Mar 7 2021 00:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.35530 * 125.68196 * 2 1 4 4 C 1.35447 * 108.87526 * 180.26445 * 3 2 1 5 5 C 1.50705 * 126.06757 * 179.74685 * 4 3 2 6 6 O 1.42907 * 109.47170 * 245.02936 * 5 4 3 7 7 Si 1.86296 * 109.47013 * 5.02861 * 5 4 3 8 8 C 1.39837 * 107.86525 * 359.77336 * 4 3 2 9 9 C 1.37650 * 125.67832 * 179.87368 * 2 1 3 10 10 C 1.46684 * 126.23299 * 0.02562 * 9 2 1 11 11 O 1.21689 * 119.99985 * 3.97767 * 10 9 2 12 12 N 1.34771 * 120.00216 * 183.98880 * 10 9 2 13 13 C 1.46499 * 120.00141 * 174.28037 * 12 10 9 14 14 H 1.08997 * 112.84560 * 23.80791 * 13 12 10 15 15 C 1.53788 * 113.61389 * 154.99846 * 13 12 10 16 16 C 1.53785 * 87.08083 * 89.11491 * 15 13 12 17 17 H 1.08990 * 113.61589 * 270.88474 * 16 15 13 18 18 C 1.50701 * 113.60935 * 139.97808 * 16 15 13 19 19 C 1.38452 * 119.98228 * 119.72945 * 18 16 15 20 20 F 1.35102 * 120.01421 * 0.02562 * 19 18 16 21 21 C 1.38446 * 119.97070 * 179.76970 * 19 18 16 22 22 C 1.38393 * 119.95058 * 0.52480 * 21 19 18 23 23 F 1.35097 * 120.01611 * 179.75230 * 22 21 19 24 24 C 1.38500 * 119.97450 * 359.72697 * 22 21 19 25 25 C 1.38182 * 120.02518 * 359.97438 * 24 22 21 26 26 C 1.53778 * 113.61743 * 252.49312 * 13 12 10 27 27 H 1.08998 * 109.47021 * 264.42842 * 1 2 3 28 28 H 1.09000 * 109.47500 * 24.42522 * 1 2 3 29 29 H 1.08998 * 109.47494 * 144.42780 * 1 2 3 30 30 H 1.08005 * 125.56332 * 0.02562 * 3 2 1 31 31 H 1.09001 * 109.46647 * 125.02987 * 5 4 3 32 32 H 0.96699 * 113.99766 * 59.99664 * 6 5 4 33 33 H 1.48501 * 110.00054 * 58.68243 * 7 5 4 34 34 H 1.48501 * 109.99807 * 179.97438 * 7 5 4 35 35 H 1.08000 * 126.45550 * 179.97438 * 8 4 3 36 36 H 0.97004 * 119.99945 * 354.27897 * 12 10 9 37 37 H 1.08999 * 113.61390 * 203.66787 * 15 13 12 38 38 H 1.09001 * 113.61136 * 334.56731 * 15 13 12 39 39 H 1.08004 * 120.02126 * 180.25903 * 21 19 18 40 40 H 1.07995 * 119.98557 * 179.97438 * 24 22 21 41 41 H 1.08000 * 119.97698 * 180.02562 * 25 24 22 42 42 H 1.09003 * 113.60995 * 25.43576 * 26 13 12 43 43 H 1.09000 * 113.61404 * 156.25150 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7092 -0.0059 5 6 4.7536 1.6188 -0.0134 6 8 5.4706 1.4510 -1.2381 7 14 4.1934 3.3889 0.1407 8 6 3.5779 -0.6889 -0.0045 9 6 2.2678 -1.1181 0.0025 10 6 1.8123 -2.5125 0.0050 11 8 0.6241 -2.7646 -0.0680 12 7 2.7098 -3.5144 0.0885 13 6 2.2512 -4.8998 0.2173 14 1 1.2428 -5.0493 -0.1683 15 6 3.2665 -5.9350 -0.2951 16 6 3.8572 -5.9423 1.1248 17 1 4.6373 -5.1965 1.2770 18 6 4.2547 -7.3139 1.6061 19 6 5.5713 -7.5727 1.9474 20 9 6.4994 -6.5958 1.8496 21 6 5.9353 -8.8315 2.3941 22 6 4.9847 -9.8328 2.4885 23 9 5.3394 -11.0631 2.9195 24 6 3.6692 -9.5730 2.1416 25 6 3.3058 -8.3145 1.7017 26 6 2.4715 -5.4938 1.6185 27 1 -0.3633 -0.0998 1.0228 28 1 -0.3634 0.9357 -0.4249 29 1 -0.3634 -0.8359 -0.5978 30 1 1.9082 2.1236 0.0004 31 1 5.4035 1.3691 0.8253 32 1 4.9525 1.6561 -2.0284 33 1 3.4193 3.5693 1.3950 34 1 5.3692 4.2960 0.1352 35 1 4.4583 -1.3145 -0.0085 36 1 3.6595 -3.3182 0.0632 37 1 2.8145 -6.8835 -0.5849 38 1 3.9480 -5.5418 -1.0495 39 1 6.9613 -9.0331 2.6646 40 1 2.9273 -10.3544 2.2148 41 1 2.2797 -8.1127 1.4317 42 1 2.5112 -4.7445 2.4091 43 1 1.8011 -6.3209 1.8525 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:04:48 Heat of formation + Delta-G solvation = -49.205746 kcal Electronic energy + Delta-G solvation = -29670.759695 eV Core-core repulsion = 25127.421259 eV Total energy + Delta-G solvation = -4543.338436 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -50.04418 -50.00013 -42.59386 -41.46722 -39.96026 -38.65470 -37.66969 -34.90103 -33.76736 -32.03702 -31.72593 -30.59375 -28.38623 -26.91271 -26.43549 -25.69007 -24.53155 -23.85677 -22.81930 -21.31841 -20.68981 -20.20634 -19.34792 -18.87269 -18.25354 -17.84132 -17.32234 -17.03131 -16.96145 -16.76951 -16.68964 -16.57402 -16.32297 -15.86020 -15.71233 -15.52745 -15.46022 -15.27173 -15.12824 -14.85457 -14.35694 -14.07075 -14.05873 -13.90403 -13.65488 -13.57053 -13.52210 -13.36184 -13.19863 -12.89349 -12.64669 -12.22670 -12.17866 -11.92666 -11.85384 -11.45633 -11.07766 -10.33071 -10.22086 -10.14314 -9.72211 -9.64838 -9.28486 -5.04126 -0.17959 -0.10422 0.40943 1.35265 1.48444 1.50461 1.68247 2.00789 2.20188 2.22992 2.32683 2.78495 3.18476 3.35724 3.39299 3.47773 3.54695 3.57817 3.65892 3.73552 3.75288 3.80166 3.88646 3.94163 4.06878 4.16231 4.24987 4.33687 4.46555 4.52510 4.60863 4.62221 4.64905 4.68543 4.72536 4.74371 4.77713 4.83413 4.85887 4.95168 4.96708 5.15181 5.16126 5.44642 5.64421 5.65627 5.86895 6.08998 6.39756 6.68705 7.12042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.404 5.404 3 C 0.028 3.972 4 C -0.208 4.208 5 C -0.031 4.031 6 O -0.543 6.543 7 Si 0.683 3.317 8 C -0.112 4.112 9 C -0.055 4.055 10 C 0.596 3.404 11 O -0.545 6.545 12 N -0.703 5.703 13 C 0.123 3.877 14 H 0.110 0.890 15 C -0.134 4.134 16 C -0.075 4.075 17 H 0.104 0.896 18 C -0.115 4.115 19 C 0.134 3.866 20 F -0.128 7.128 21 C -0.190 4.190 22 C 0.127 3.873 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.143 4.143 27 H 0.078 0.922 28 H 0.088 0.912 29 H 0.103 0.897 30 H 0.174 0.826 31 H 0.111 0.889 32 H 0.377 0.623 33 H -0.257 1.257 34 H -0.256 1.256 35 H 0.145 0.855 36 H 0.405 0.595 37 H 0.102 0.898 38 H 0.081 0.919 39 H 0.149 0.851 40 H 0.145 0.855 41 H 0.146 0.854 42 H 0.078 0.922 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.857 1.387 -2.020 3.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.076 5.076 3 C -0.108 4.108 4 C -0.214 4.214 5 C -0.142 4.142 6 O -0.348 6.348 7 Si 0.585 3.415 8 C -0.138 4.138 9 C -0.168 4.168 10 C 0.384 3.616 11 O -0.423 6.423 12 N -0.354 5.354 13 C 0.018 3.982 14 H 0.128 0.872 15 C -0.172 4.172 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.116 4.116 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.209 4.209 22 C 0.108 3.892 23 F -0.109 7.109 24 C -0.178 4.178 25 C -0.078 4.078 26 C -0.182 4.182 27 H 0.097 0.903 28 H 0.106 0.894 29 H 0.121 0.879 30 H 0.191 0.809 31 H 0.128 0.872 32 H 0.224 0.776 33 H -0.182 1.182 34 H -0.180 1.180 35 H 0.163 0.837 36 H 0.240 0.760 37 H 0.120 0.880 38 H 0.100 0.900 39 H 0.167 0.833 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.096 0.904 43 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.574 1.735 -1.154 4.137 hybrid contribution 1.032 -0.547 0.523 1.280 sum -2.542 1.188 -0.631 2.876 Atomic orbital electron populations 1.22337 0.75474 1.05258 1.04529 1.43808 1.07026 1.04689 1.52030 1.21872 0.90045 0.91639 1.07278 1.19786 0.93736 0.94864 1.13064 1.24319 0.92907 1.07346 0.89675 1.86488 1.41233 1.92000 1.15090 0.95122 0.83548 0.75909 0.86908 1.21196 0.94269 0.94677 1.03643 1.19971 0.90290 0.87524 1.19058 1.16935 0.85524 0.83480 0.75627 1.90805 1.16184 1.84810 1.50538 1.45282 1.09821 1.05428 1.74873 1.21829 0.99811 0.79962 0.96616 0.87153 1.23454 0.98091 0.99776 0.95916 1.21564 0.98053 0.92997 0.96754 0.87754 1.19798 0.91647 0.97281 1.02850 1.17147 0.86062 0.85235 1.00138 1.91534 1.64695 1.60809 1.93614 1.21087 1.01659 0.92114 1.06089 1.17340 0.93073 0.80311 0.98493 1.91559 1.92554 1.39755 1.86983 1.21254 0.94917 0.98899 1.02739 1.20770 0.99773 0.90849 0.96418 1.23599 0.95598 1.01293 0.97674 0.90331 0.89355 0.87893 0.80925 0.87205 0.77553 1.18222 1.18044 0.83744 0.75967 0.87995 0.90047 0.83297 0.83759 0.83686 0.90373 0.88347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.08 10.47 59.84 0.63 0.55 16 2 N -0.40 -0.23 3.16 -120.24 -0.38 -0.61 16 3 C 0.03 -0.02 9.92 -16.91 -0.17 -0.19 16 4 C -0.21 -0.02 5.43 -105.02 -0.57 -0.59 16 5 C -0.03 0.01 3.02 36.01 0.11 0.12 16 6 O -0.54 -0.12 12.88 -35.23 -0.45 -0.58 16 7 Si 0.68 -1.00 30.60 -169.99 -5.20 -6.20 16 8 C -0.11 -0.06 10.29 -39.12 -0.40 -0.46 16 9 C -0.06 -0.08 6.89 -81.98 -0.56 -0.64 16 10 C 0.60 1.16 7.77 -12.85 -0.10 1.06 16 11 O -0.54 -2.52 14.36 5.20 0.07 -2.44 16 12 N -0.70 0.54 5.25 -54.32 -0.28 0.25 16 13 C 0.12 -0.18 4.36 -67.12 -0.29 -0.48 16 14 H 0.11 -0.03 7.41 -51.93 -0.38 -0.41 16 15 C -0.13 0.37 7.29 -25.91 -0.19 0.18 16 16 C -0.08 0.15 3.78 -90.96 -0.34 -0.19 16 17 H 0.10 -0.18 7.45 -51.93 -0.39 -0.57 16 18 C -0.11 0.11 5.29 -104.55 -0.55 -0.45 16 19 C 0.13 0.07 7.25 -39.43 -0.29 -0.21 16 20 F -0.13 -0.19 16.36 2.25 0.04 -0.16 16 21 C -0.19 -0.09 10.01 -39.45 -0.39 -0.49 16 22 C 0.13 0.08 7.30 -39.43 -0.29 -0.21 16 23 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 24 C -0.16 0.18 10.03 -39.51 -0.40 -0.22 16 25 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 26 C -0.14 0.29 7.25 -25.92 -0.19 0.11 16 27 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 -0.34 8.12 -51.93 -0.42 -0.76 16 29 H 0.10 0.03 6.57 -51.93 -0.34 -0.31 16 30 H 0.17 -0.62 6.21 -52.48 -0.33 -0.95 16 31 H 0.11 0.03 7.96 -51.93 -0.41 -0.39 16 32 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 33 H -0.26 -0.23 7.11 56.52 0.40 0.18 16 34 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 35 H 0.14 -0.15 7.45 -52.49 -0.39 -0.54 16 36 H 0.40 -1.02 7.60 -40.82 -0.31 -1.33 16 37 H 0.10 -0.36 7.72 -51.93 -0.40 -0.76 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.15 -0.08 8.06 -52.48 -0.42 -0.50 16 40 H 0.14 -0.40 8.06 -52.49 -0.42 -0.83 16 41 H 0.15 -0.62 6.65 -52.49 -0.35 -0.97 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 43 H 0.10 -0.31 6.31 -51.93 -0.33 -0.63 16 LS Contribution 367.74 15.07 5.54 5.54 Total: 0.00 -8.26 367.74 -9.94 -18.20 By element: Atomic # 1 Polarization: -6.52 SS G_CDS: -4.97 Total: -11.48 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.34 Total: -2.32 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.67 Total: -0.35 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.38 Total: -3.02 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.08 Total: -0.37 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.20 Total: -6.20 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.26 -9.94 -18.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.004 kcal (2) G-P(sol) polarization free energy of solvation -8.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.202 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds