Wall clock time and date at job start Sun Mar 7 2021 00:04:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35451 * 125.56432 * 2 1 4 4 C 1.50696 * 126.06936 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.47354 * 149.97488 * 4 3 2 6 6 Si 1.86298 * 109.47048 * 29.97088 * 4 3 2 7 7 C 1.39841 * 107.86380 * 179.71966 * 3 2 1 8 8 C 1.50695 * 126.45929 * 180.26303 * 7 3 2 9 9 C 1.37872 * 107.08218 * 0.42121 * 7 3 2 10 10 C 1.46685 * 126.22857 * 179.84493 * 9 7 3 11 11 O 1.21690 * 120.00173 * 359.71325 * 10 9 7 12 12 N 1.34776 * 119.99719 * 179.71554 * 10 9 7 13 13 C 1.46504 * 119.99827 * 180.02562 * 12 10 9 14 14 H 1.08998 * 112.84774 * 23.79924 * 13 12 10 15 15 C 1.53782 * 113.61465 * 154.99989 * 13 12 10 16 16 C 1.53779 * 87.07984 * 89.19444 * 15 13 12 17 17 H 1.09002 * 113.61718 * 270.79575 * 16 15 13 18 18 C 1.50707 * 113.61258 * 139.98219 * 16 15 13 19 19 C 1.38443 * 119.98681 * 119.97619 * 18 16 15 20 20 F 1.35098 * 120.01594 * 0.04296 * 19 18 16 21 21 C 1.38447 * 119.97374 * 180.02562 * 19 18 16 22 22 C 1.38400 * 119.94665 * 359.97438 * 21 19 18 23 23 F 1.35101 * 120.00736 * 179.97438 * 22 21 19 24 24 C 1.38491 * 119.97385 * 359.72802 * 22 21 19 25 25 C 1.38182 * 120.02870 * 0.55324 * 24 22 21 26 26 C 1.53778 * 87.08326 * 25.43087 * 16 15 13 27 27 N 1.35534 * 125.56370 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.47202 * 269.99601 * 1 2 3 29 29 H 1.08998 * 109.47150 * 30.00033 * 1 2 3 30 30 H 1.09003 * 109.47133 * 149.99998 * 1 2 3 31 31 H 1.09002 * 109.47050 * 269.97456 * 4 3 2 32 32 H 0.96705 * 113.99656 * 299.99639 * 5 4 3 33 33 H 1.48497 * 110.00077 * 58.68404 * 6 4 3 34 34 H 1.48504 * 110.00175 * 180.02562 * 6 4 3 35 35 H 1.08996 * 109.47785 * 270.21235 * 8 7 3 36 36 H 1.09008 * 109.46669 * 30.21094 * 8 7 3 37 37 H 1.08993 * 109.47191 * 150.20652 * 8 7 3 38 38 H 0.96999 * 120.00077 * 359.97438 * 12 10 9 39 39 H 1.09004 * 113.61192 * 334.64821 * 15 13 12 40 40 H 1.08998 * 113.68981 * 203.75399 * 15 13 12 41 41 H 1.08002 * 120.02422 * 179.97438 * 21 19 18 42 42 H 1.08008 * 119.98575 * 180.29093 * 24 22 21 43 43 H 1.08002 * 119.98029 * 179.72757 * 25 24 22 44 44 H 1.09003 * 113.61171 * 89.11487 * 26 16 15 45 45 H 1.08999 * 113.61471 * 220.01469 * 26 16 15 46 46 H 0.97005 * 125.67964 * 0.04562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5320 -0.0005 5 8 2.7767 3.3519 0.6737 6 14 0.1799 2.6422 0.8763 7 6 3.6270 0.6767 0.0065 8 6 4.8486 1.5590 0.0144 9 6 3.6122 -0.7020 0.0007 10 6 4.7860 -1.5816 0.0011 11 8 5.9049 -1.1031 0.0018 12 7 4.6253 -2.9197 0.0008 13 6 5.7977 -3.7983 0.0018 14 1 6.6871 -3.3167 0.4080 15 6 5.5243 -5.1897 0.5968 16 6 5.1298 -5.6324 -0.8221 17 1 4.0743 -5.4820 -1.0489 18 6 5.6142 -7.0139 -1.1800 19 6 4.7034 -8.0015 -1.5141 20 9 3.3806 -7.7269 -1.5201 21 6 5.1486 -9.2707 -1.8423 22 6 6.5040 -9.5503 -1.8365 23 9 6.9398 -10.7886 -2.1561 24 6 7.4136 -8.5590 -1.5081 25 6 6.9678 -7.2942 -1.1750 26 6 6.0398 -4.5067 -1.3415 27 7 2.2953 -1.1025 0.0005 28 1 -0.3634 -0.0001 1.0277 29 1 -0.3633 0.8900 -0.5138 30 1 -0.3633 -0.8900 -0.5138 31 1 1.7063 2.8767 -1.0284 32 1 2.9285 3.1020 1.5955 33 1 0.3143 2.1452 2.2691 34 1 -0.2996 4.0476 0.8821 35 1 5.1465 1.7765 -1.0112 36 1 4.6202 2.4910 0.5318 37 1 5.6625 1.0481 0.5286 38 1 3.7334 -3.3011 0.0006 39 1 4.6962 -5.2065 1.3054 40 1 6.4169 -5.6866 0.9769 41 1 4.4387 -10.0419 -2.1026 42 1 8.4717 -8.7758 -1.5081 43 1 7.6776 -6.5230 -0.9147 44 1 7.0742 -4.8159 -1.4918 45 1 5.6281 -3.9723 -2.1976 46 1 1.9834 -2.0211 0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:04:59 Heat of formation + Delta-G solvation = -60.389061 kcal Electronic energy + Delta-G solvation = -31878.344478 eV Core-core repulsion = 27178.983478 eV Total energy + Delta-G solvation = -4699.360999 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.143 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.09385 -50.06042 -42.69145 -41.41880 -40.02577 -38.66240 -37.91384 -34.83307 -33.64924 -33.00679 -31.89998 -31.44680 -29.30100 -27.67716 -26.76484 -26.55829 -25.79028 -24.28984 -23.11435 -22.54343 -20.82207 -20.59885 -20.13007 -19.48693 -19.23249 -18.24625 -17.61672 -17.43368 -17.06951 -16.90661 -16.71488 -16.64547 -16.46950 -16.38911 -15.96660 -15.83585 -15.53609 -15.28338 -15.17889 -14.94980 -14.62491 -14.35971 -14.06810 -13.95540 -13.90926 -13.76789 -13.70089 -13.56803 -13.46836 -13.26606 -13.12106 -12.86216 -12.58897 -12.54540 -12.32541 -12.08197 -11.82316 -11.77036 -11.35823 -11.19983 -10.52664 -10.25000 -10.11181 -9.62099 -9.54301 -8.96997 -4.76403 -0.14807 -0.05253 0.34941 1.23317 1.67438 1.70342 1.91586 2.06922 2.12637 2.23761 2.26859 2.80229 3.26763 3.42104 3.42378 3.46051 3.60693 3.64679 3.79927 3.83996 3.85583 3.91547 3.98359 4.04512 4.14658 4.21741 4.51666 4.56928 4.65410 4.67178 4.69175 4.70962 4.78266 4.79985 4.82109 4.84285 4.86659 4.88987 4.90341 4.97099 5.05492 5.07045 5.12896 5.20463 5.27336 5.33510 5.52194 5.70486 5.70780 5.83586 6.36606 6.50874 6.59444 7.07915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C 0.086 3.914 3 C -0.232 4.232 4 C -0.051 4.051 5 O -0.549 6.549 6 Si 0.759 3.241 7 C -0.070 4.070 8 C -0.093 4.093 9 C -0.082 4.082 10 C 0.591 3.409 11 O -0.564 6.564 12 N -0.702 5.702 13 C 0.116 3.884 14 H 0.094 0.906 15 C -0.122 4.122 16 C -0.070 4.070 17 H 0.104 0.896 18 C -0.112 4.112 19 C 0.117 3.883 20 F -0.136 7.136 21 C -0.198 4.198 22 C 0.107 3.893 23 F -0.142 7.142 24 C -0.155 4.155 25 C -0.056 4.056 26 C -0.139 4.139 27 N -0.518 5.518 28 H 0.102 0.898 29 H 0.118 0.882 30 H 0.117 0.883 31 H 0.113 0.887 32 H 0.381 0.619 33 H -0.291 1.291 34 H -0.305 1.305 35 H 0.053 0.947 36 H 0.084 0.916 37 H 0.057 0.943 38 H 0.408 0.592 39 H 0.086 0.914 40 H 0.113 0.887 41 H 0.151 0.849 42 H 0.161 0.839 43 H 0.171 0.829 44 H 0.110 0.890 45 H 0.066 0.934 46 H 0.433 0.567 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.632 -4.200 0.431 7.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.034 4.034 3 C -0.238 4.238 4 C -0.160 4.160 5 O -0.356 6.356 6 Si 0.664 3.336 7 C -0.079 4.079 8 C -0.150 4.150 9 C -0.194 4.194 10 C 0.381 3.619 11 O -0.443 6.443 12 N -0.353 5.353 13 C 0.011 3.989 14 H 0.112 0.888 15 C -0.160 4.160 16 C -0.088 4.088 17 H 0.122 0.878 18 C -0.113 4.113 19 C 0.098 3.902 20 F -0.115 7.115 21 C -0.218 4.218 22 C 0.088 3.912 23 F -0.121 7.121 24 C -0.174 4.174 25 C -0.074 4.074 26 C -0.177 4.177 27 N -0.116 5.116 28 H 0.120 0.880 29 H 0.135 0.865 30 H 0.135 0.865 31 H 0.131 0.869 32 H 0.230 0.770 33 H -0.218 1.218 34 H -0.234 1.234 35 H 0.072 0.928 36 H 0.102 0.898 37 H 0.076 0.924 38 H 0.245 0.755 39 H 0.104 0.896 40 H 0.131 0.869 41 H 0.169 0.831 42 H 0.179 0.821 43 H 0.188 0.812 44 H 0.128 0.872 45 H 0.085 0.915 46 H 0.274 0.726 Dipole moment (debyes) X Y Z Total from point charges -5.275 -3.504 0.504 6.352 hybrid contribution 0.599 -0.721 0.445 1.038 sum -4.675 -4.225 0.949 6.373 Atomic orbital electron populations 1.20710 0.84530 1.05681 1.05673 1.20694 0.95055 0.84859 1.02797 1.19644 0.92537 0.95723 1.15931 1.24628 1.01991 0.86598 1.02770 1.86516 1.61900 1.57707 1.29483 0.94453 0.79175 0.79931 0.80035 1.19935 0.95388 0.91459 1.01086 1.20421 0.94086 0.98849 1.01665 1.19917 0.83798 0.93681 1.22034 1.17163 0.87203 0.82012 0.75540 1.90819 1.25766 1.75756 1.51975 1.45410 1.10111 1.04608 1.75142 1.21878 0.89175 0.90173 0.97722 0.88781 1.23421 1.03958 0.93247 0.95355 1.21530 1.00584 0.89061 0.97609 0.87782 1.19957 0.93455 0.95531 1.02359 1.17281 0.77816 0.93407 1.01710 1.91498 1.31794 1.94114 1.94076 1.21175 0.95851 0.97848 1.06898 1.17573 0.92203 0.80656 1.00762 1.91527 1.90124 1.40130 1.90311 1.21516 1.01306 0.92647 1.01922 1.21068 0.94400 0.96353 0.95554 1.23593 1.01339 0.95496 0.97267 1.41698 1.04033 1.09267 1.56638 0.88022 0.86480 0.86506 0.86894 0.77008 1.21801 1.23376 0.92819 0.89782 0.92377 0.75538 0.89582 0.86887 0.83094 0.82097 0.81208 0.87173 0.91477 0.72607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.47 8.21 71.24 0.59 2.06 16 2 C 0.09 -0.40 6.84 41.34 0.28 -0.11 16 3 C -0.23 -0.40 5.38 -20.12 -0.11 -0.51 16 4 C -0.05 -0.06 3.03 71.23 0.22 0.16 16 5 O -0.55 -2.79 10.20 -148.98 -1.52 -4.31 16 6 Si 0.76 -1.89 26.76 68.60 1.84 -0.06 16 7 C -0.07 -0.47 6.15 -19.56 -0.12 -0.59 16 8 C -0.09 -0.87 9.51 71.23 0.68 -0.19 16 9 C -0.08 -0.28 7.06 40.35 0.28 0.00 16 10 C 0.59 3.10 7.79 86.45 0.67 3.78 16 11 O -0.56 -7.64 14.40 -4.32 -0.06 -7.70 16 12 N -0.70 2.02 5.26 -443.99 -2.34 -0.32 16 13 C 0.12 -0.41 4.32 45.52 0.20 -0.22 16 14 H 0.09 0.04 7.46 -2.39 -0.02 0.02 16 15 C -0.12 0.95 7.29 31.12 0.23 1.17 16 16 C -0.07 0.44 3.78 -11.01 -0.04 0.40 16 17 H 0.10 -0.68 7.44 -2.39 -0.02 -0.70 16 18 C -0.11 0.42 5.29 -19.81 -0.10 0.31 16 19 C 0.12 -0.02 7.24 22.37 0.16 0.14 16 20 F -0.14 -0.17 16.36 44.97 0.74 0.56 16 21 C -0.20 -0.10 10.01 22.36 0.22 0.12 16 22 C 0.11 0.08 7.30 22.37 0.16 0.24 16 23 F -0.14 -0.56 17.27 44.97 0.78 0.22 16 24 C -0.16 0.56 10.02 22.32 0.22 0.78 16 25 C -0.06 0.33 8.61 22.26 0.19 0.52 16 26 C -0.14 0.71 7.25 31.12 0.23 0.93 16 27 N -0.52 2.61 5.99 -171.93 -1.03 1.58 16 28 H 0.10 -1.49 7.13 -2.39 -0.02 -1.51 16 29 H 0.12 -1.84 5.17 -2.39 -0.01 -1.85 16 30 H 0.12 -2.10 8.14 -2.39 -0.02 -2.12 16 31 H 0.11 0.02 7.96 -2.39 -0.02 0.00 16 32 H 0.38 0.26 8.46 -74.05 -0.63 -0.37 16 33 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 34 H -0.30 -1.78 7.11 99.48 0.71 -1.07 16 35 H 0.05 0.57 8.14 -2.39 -0.02 0.55 16 36 H 0.08 0.65 5.47 -2.38 -0.01 0.64 16 37 H 0.06 0.72 6.49 -2.39 -0.02 0.70 16 38 H 0.41 -3.69 7.83 -92.71 -0.73 -4.42 16 39 H 0.09 -0.74 8.14 -2.38 -0.02 -0.76 16 40 H 0.11 -1.06 7.72 -2.39 -0.02 -1.08 16 41 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 42 H 0.16 -1.17 8.06 -2.91 -0.02 -1.19 16 43 H 0.17 -1.89 6.65 -2.91 -0.02 -1.91 16 44 H 0.11 -0.82 6.31 -2.39 -0.02 -0.83 16 45 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 46 H 0.43 -5.44 8.19 -92.70 -0.76 -6.20 16 Total: 0.00 -24.86 376.53 1.37 -23.49 By element: Atomic # 1 Polarization: -21.47 SS G_CDS: -0.99 Total: -22.46 kcal Atomic # 6 Polarization: 5.04 SS G_CDS: 3.96 Total: 9.00 kcal Atomic # 7 Polarization: 4.62 SS G_CDS: -3.37 Total: 1.26 kcal Atomic # 8 Polarization: -10.43 SS G_CDS: -1.58 Total: -12.01 kcal Atomic # 9 Polarization: -0.73 SS G_CDS: 1.51 Total: 0.78 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: 1.84 Total: -0.06 kcal Total: -24.86 1.37 -23.49 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.897 kcal (2) G-P(sol) polarization free energy of solvation -24.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.492 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds