Wall clock time and date at job start Sun Mar 7 2021 00:05:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35659 * 117.00591 * 2 1 4 4 C 1.38402 * 120.11587 * 359.97438 * 3 2 1 5 5 C 1.38733 * 120.03037 * 179.97438 * 4 3 2 6 6 O 1.35708 * 119.86020 * 180.02562 * 5 4 3 7 7 C 1.42896 * 117.00261 * 359.97438 * 6 5 4 8 8 C 1.39138 * 120.27063 * 0.02562 * 5 4 3 9 9 C 1.50706 * 119.87525 * 179.97438 * 8 5 4 10 10 O 1.42893 * 109.47206 * 75.02520 * 9 8 5 11 11 Si 1.86308 * 109.46857 * 195.02597 * 9 8 5 12 12 C 1.37587 * 120.24581 * 0.02562 * 8 5 4 13 13 C 1.39820 * 119.95930 * 0.23215 * 12 8 5 14 14 C 1.47298 * 120.13138 * 179.74590 * 13 12 8 15 15 O 1.21616 * 120.00041 * 179.97438 * 14 13 12 16 16 N 1.34780 * 120.00089 * 359.97438 * 14 13 12 17 17 C 1.46504 * 119.99839 * 179.97438 * 16 14 13 18 18 H 1.09006 * 112.84988 * 23.80733 * 17 16 14 19 19 C 1.53777 * 113.61275 * 155.00091 * 17 16 14 20 20 C 1.53785 * 87.07910 * 89.11686 * 19 17 16 21 21 H 1.08995 * 113.61461 * 270.79712 * 20 19 17 22 22 C 1.50708 * 113.61220 * 139.98097 * 20 19 17 23 23 C 1.38445 * 119.98439 * 120.00031 * 22 20 19 24 24 F 1.35101 * 120.01693 * 0.02562 * 23 22 20 25 25 C 1.38445 * 119.97092 * 179.97438 * 23 22 20 26 26 C 1.38391 * 119.94941 * 0.02562 * 25 23 22 27 27 F 1.35104 * 120.01206 * 179.97438 * 26 25 23 28 28 C 1.38489 * 119.98048 * 359.97438 * 26 25 23 29 29 C 1.38197 * 120.02070 * 359.72882 * 28 26 25 30 30 C 1.53780 * 87.08318 * 25.43222 * 20 19 17 31 31 H 1.08996 * 109.47717 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47652 * 300.00767 * 1 2 3 33 33 H 1.09006 * 109.46892 * 59.99851 * 1 2 3 34 34 H 1.08002 * 119.98555 * 0.02562 * 4 3 2 35 35 H 1.09001 * 109.47014 * 299.99793 * 7 6 5 36 36 H 1.09002 * 109.47468 * 59.99979 * 7 6 5 37 37 H 1.09007 * 109.46968 * 179.97438 * 7 6 5 38 38 H 1.08992 * 109.47374 * 315.02182 * 9 8 5 39 39 H 0.96701 * 114.00227 * 300.00311 * 10 9 8 40 40 H 1.48500 * 109.99670 * 298.67887 * 11 9 8 41 41 H 1.48500 * 110.00171 * 60.00002 * 11 9 8 42 42 H 1.08002 * 120.01732 * 179.97438 * 12 8 5 43 43 H 0.96994 * 120.00310 * 0.02562 * 16 14 13 44 44 H 1.09002 * 113.61378 * 203.66362 * 19 17 16 45 45 H 1.08997 * 113.61643 * 334.57023 * 19 17 16 46 46 H 1.08003 * 120.02236 * 179.97438 * 25 23 22 47 47 H 1.08000 * 119.99308 * 180.02562 * 28 26 25 48 48 H 1.07992 * 119.97601 * 180.28910 * 29 28 26 49 49 H 1.08995 * 113.61683 * 220.02234 * 30 20 19 50 50 H 1.09000 * 113.61241 * 89.11235 * 30 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9254 3.6061 0.0000 6 8 1.1853 4.7436 0.0000 7 6 -0.2357 4.5931 -0.0011 8 6 3.3146 3.6833 0.0005 9 6 3.9917 5.0297 0.0005 10 8 3.8942 5.6119 1.3018 11 14 5.7865 4.8222 -0.4541 12 6 4.0725 2.5350 0.0000 13 6 3.4461 1.2849 -0.0060 14 6 4.2538 0.0532 -0.0122 15 8 3.7065 -1.0329 -0.0169 16 7 5.5995 0.1296 -0.0127 17 6 6.4028 -1.0955 -0.0183 18 1 5.8660 -1.9517 -0.4271 19 6 7.8081 -0.9079 -0.6138 20 6 8.2753 -0.5446 0.8056 21 1 8.1910 0.5177 1.0345 22 6 9.6242 -1.1147 1.1615 23 6 10.6667 -0.2677 1.4971 24 9 10.4748 1.0696 1.5061 25 6 11.9056 -0.7917 1.8245 26 6 12.1006 -2.1617 1.8154 27 9 13.3092 -2.6744 2.1342 28 6 11.0564 -3.0071 1.4794 29 6 9.8184 -2.4833 1.1587 30 6 7.0956 -1.3840 1.3240 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3634 0.5139 0.8899 33 1 -0.3633 0.5139 -0.8900 34 1 0.2149 2.3165 -0.0005 35 1 -0.5422 4.0444 -0.8917 36 1 -0.5436 4.0435 0.8883 37 1 -0.7052 5.5769 -0.0006 38 1 3.5058 5.6807 -0.7261 39 1 2.9860 5.7492 1.6043 40 1 6.4678 3.9623 0.5468 41 1 5.9015 4.2175 -1.8055 42 1 5.1506 2.5992 0.0000 43 1 6.0360 0.9958 -0.0085 44 1 8.2472 -1.8297 -0.9955 45 1 7.8759 -0.0811 -1.3208 46 1 12.7195 -0.1316 2.0860 47 1 11.2082 -4.0764 1.4726 48 1 9.0034 -3.1434 0.9013 49 1 6.5882 -0.9415 2.1812 50 1 7.3400 -2.4359 1.4719 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:06 Heat of formation + Delta-G solvation = -139.217805 kcal Electronic energy + Delta-G solvation = -38590.580871 eV Core-core repulsion = 33187.636987 eV Total energy + Delta-G solvation = -5402.943884 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -50.01465 -49.97219 -42.20118 -41.43964 -40.37743 -39.80166 -38.68374 -38.33120 -36.95522 -34.53799 -32.27835 -32.16840 -31.83796 -31.13276 -29.18785 -28.35692 -26.85541 -26.37452 -26.07335 -24.80433 -24.20608 -23.23105 -22.63539 -21.61749 -20.39295 -20.02659 -19.33790 -18.78672 -18.55980 -18.21153 -17.77053 -17.47016 -17.28647 -17.11225 -16.99856 -16.83024 -16.68939 -16.49857 -16.39539 -16.29576 -15.87215 -15.80919 -15.71247 -15.46445 -15.35166 -15.24382 -14.89510 -14.33075 -14.28624 -14.09633 -13.96835 -13.82066 -13.69439 -13.55386 -13.52685 -13.36485 -12.88599 -12.86534 -12.70317 -12.62612 -12.60340 -12.19960 -12.13441 -11.81211 -11.74964 -11.38924 -11.34046 -11.09236 -10.72849 -10.15893 -10.06973 -9.98950 -9.61566 -9.21476 -4.86976 -0.30783 -0.14752 -0.07391 0.04598 1.33051 1.59846 1.77852 1.87646 1.88826 2.04489 2.07982 2.23571 2.61837 2.81429 3.22798 3.33806 3.39569 3.42586 3.45076 3.54756 3.58751 3.64268 3.65458 3.77784 3.84234 3.87053 3.92442 3.96574 3.96779 4.01531 4.05865 4.07324 4.11180 4.15622 4.31980 4.38916 4.46796 4.52373 4.57653 4.66155 4.70397 4.72223 4.75356 4.81007 4.85230 4.87158 4.92459 4.96382 5.00062 5.03634 5.19023 5.21133 5.55858 5.68645 5.86168 6.19501 6.48090 6.59490 7.29439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.233 3.767 4 C -0.308 4.308 5 C 0.210 3.790 6 O -0.306 6.306 7 C 0.022 3.978 8 C -0.187 4.187 9 C -0.068 4.068 10 O -0.535 6.535 11 Si 0.739 3.261 12 C -0.011 4.011 13 C -0.206 4.206 14 C 0.570 3.430 15 O -0.514 6.514 16 N -0.717 5.717 17 C 0.123 3.877 18 H 0.111 0.889 19 C -0.136 4.136 20 C -0.077 4.077 21 H 0.102 0.898 22 C -0.114 4.114 23 C 0.133 3.867 24 F -0.128 7.128 25 C -0.190 4.190 26 C 0.127 3.873 27 F -0.130 7.130 28 C -0.159 4.159 29 C -0.060 4.060 30 C -0.143 4.143 31 H 0.108 0.892 32 H 0.058 0.942 33 H 0.058 0.942 34 H 0.147 0.853 35 H 0.060 0.940 36 H 0.061 0.939 37 H 0.109 0.891 38 H 0.076 0.924 39 H 0.366 0.634 40 H -0.250 1.250 41 H -0.245 1.245 42 H 0.135 0.865 43 H 0.396 0.604 44 H 0.102 0.898 45 H 0.079 0.921 46 H 0.149 0.851 47 H 0.145 0.855 48 H 0.146 0.854 49 H 0.078 0.922 50 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.668 2.857 -1.709 4.954 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.184 3.816 4 C -0.328 4.328 5 C 0.163 3.837 6 O -0.218 6.218 7 C -0.072 4.072 8 C -0.189 4.189 9 C -0.177 4.177 10 O -0.341 6.341 11 Si 0.637 3.363 12 C -0.030 4.030 13 C -0.210 4.210 14 C 0.358 3.642 15 O -0.389 6.389 16 N -0.370 5.370 17 C 0.018 3.982 18 H 0.129 0.871 19 C -0.173 4.173 20 C -0.095 4.095 21 H 0.120 0.880 22 C -0.115 4.115 23 C 0.114 3.886 24 F -0.107 7.107 25 C -0.209 4.209 26 C 0.108 3.892 27 F -0.109 7.109 28 C -0.178 4.178 29 C -0.078 4.078 30 C -0.181 4.181 31 H 0.126 0.874 32 H 0.076 0.924 33 H 0.076 0.924 34 H 0.164 0.836 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.127 0.873 38 H 0.094 0.906 39 H 0.214 0.786 40 H -0.175 1.175 41 H -0.169 1.169 42 H 0.152 0.848 43 H 0.231 0.769 44 H 0.121 0.879 45 H 0.097 0.903 46 H 0.167 0.833 47 H 0.162 0.838 48 H 0.163 0.837 49 H 0.097 0.903 50 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.657 1.500 -1.962 3.628 hybrid contribution -1.660 0.085 0.379 1.705 sum -4.317 1.585 -1.583 4.863 Atomic orbital electron populations 1.23254 0.78127 1.04961 1.01337 1.86401 1.21259 1.24909 1.85762 1.18685 0.90512 0.84515 0.87930 1.21295 1.01149 0.91418 1.18912 1.18712 0.90227 0.84868 0.89939 1.86038 1.19937 1.28724 1.87125 1.23234 0.77300 1.04832 1.01864 1.19453 0.90478 0.96748 1.12198 1.25091 1.13567 0.90346 0.88664 1.86714 1.32157 1.83260 1.31921 0.92878 0.75856 0.88470 0.79119 1.20768 0.98866 0.90317 0.93011 1.19058 0.90796 0.93491 1.17695 1.17769 0.81599 0.88595 0.76261 1.90846 1.71261 1.28542 1.48263 1.45593 1.05864 1.08974 1.76567 1.21806 0.91051 0.88528 0.96816 0.87143 1.23463 0.94725 1.03485 0.95677 1.21574 0.90102 1.00522 0.97348 0.87952 1.19799 0.95151 0.93562 1.02994 1.17148 0.93380 0.77539 1.00557 1.91533 1.95528 1.29755 1.93847 1.21077 0.98195 0.94914 1.06725 1.17333 0.81334 0.91024 0.99553 1.91559 1.42041 1.87239 1.90024 1.21254 0.92416 1.01008 1.03112 1.20777 0.96741 0.93692 0.96567 1.23592 0.95296 1.00927 0.98303 0.87351 0.92364 0.92364 0.83566 0.92120 0.92073 0.87266 0.90596 0.78646 1.17465 1.16937 0.84783 0.76916 0.87935 0.90277 0.83280 0.83756 0.83667 0.90337 0.88332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.02 8.56 -40.60 -0.35 -1.37 16 3 C 0.23 0.74 6.70 -38.73 -0.26 0.48 16 4 C -0.31 -0.27 8.01 -39.34 -0.31 -0.59 16 5 C 0.21 0.24 6.62 -39.06 -0.26 -0.02 16 6 O -0.31 0.10 9.36 -18.83 -0.18 -0.08 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 8 C -0.19 -0.32 5.28 -104.52 -0.55 -0.87 16 9 C -0.07 -0.04 2.32 36.01 0.08 0.04 16 10 O -0.54 -0.70 12.65 -35.23 -0.45 -1.15 16 11 Si 0.74 -0.45 30.39 -169.99 -5.17 -5.62 16 12 C -0.01 -0.02 8.14 -39.23 -0.32 -0.34 16 13 C -0.21 -0.71 5.89 -104.84 -0.62 -1.33 16 14 C 0.57 2.46 7.76 -12.58 -0.10 2.36 16 15 O -0.51 -3.86 14.75 -16.66 -0.25 -4.11 16 16 N -0.72 -0.98 5.21 -54.13 -0.28 -1.27 16 17 C 0.12 0.02 4.32 -67.12 -0.29 -0.27 16 18 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 19 C -0.14 0.21 7.29 -25.92 -0.19 0.02 16 20 C -0.08 0.06 3.78 -90.95 -0.34 -0.28 16 21 H 0.10 -0.03 7.44 -51.93 -0.39 -0.42 16 22 C -0.11 0.01 5.29 -104.54 -0.55 -0.54 16 23 C 0.13 0.15 7.24 -39.43 -0.29 -0.13 16 24 F -0.13 -0.27 16.36 2.25 0.04 -0.23 16 25 C -0.19 -0.17 10.01 -39.45 -0.39 -0.57 16 26 C 0.13 0.13 7.30 -39.43 -0.29 -0.16 16 27 F -0.13 -0.29 17.27 2.25 0.04 -0.25 16 28 C -0.16 0.10 10.03 -39.50 -0.40 -0.30 16 29 C -0.06 0.08 8.62 -39.60 -0.34 -0.26 16 30 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 31 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 32 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 33 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 34 H 0.15 -0.25 4.50 -52.49 -0.24 -0.48 16 35 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 36 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 37 H 0.11 -0.55 8.14 -51.93 -0.42 -0.97 16 38 H 0.08 -0.02 7.82 -51.93 -0.41 -0.43 16 39 H 0.37 -0.24 8.59 45.56 0.39 0.15 16 40 H -0.25 -0.24 6.80 56.52 0.38 0.15 16 41 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 42 H 0.14 0.08 3.24 -52.49 -0.17 -0.09 16 43 H 0.40 -0.11 6.72 -40.82 -0.27 -0.38 16 44 H 0.10 -0.26 7.73 -51.93 -0.40 -0.66 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.15 -0.03 8.06 -52.48 -0.42 -0.45 16 47 H 0.14 -0.33 8.06 -52.49 -0.42 -0.76 16 48 H 0.15 -0.50 6.64 -52.49 -0.35 -0.85 16 49 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 50 H 0.10 -0.19 6.29 -51.93 -0.33 -0.52 16 LS Contribution 415.64 15.07 6.26 6.26 Total: 0.00 -8.52 415.64 -9.83 -18.35 By element: Atomic # 1 Polarization: -3.69 SS G_CDS: -5.89 Total: -9.58 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -3.62 Total: -0.97 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.28 Total: -1.27 kcal Atomic # 8 Polarization: -5.49 SS G_CDS: -1.22 Total: -6.70 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.08 Total: -0.49 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.17 Total: -5.62 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -8.52 -9.83 -18.35 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.864 kcal (2) G-P(sol) polarization free energy of solvation -8.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.833 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds