Wall clock time and date at job start Sun Mar 7 2021 00:05:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86293 * 109.47346 * 2 1 4 4 C 1.50698 * 109.46978 * 120.00169 * 2 1 3 5 5 C 1.38418 * 119.89290 * 245.00171 * 4 2 1 6 6 C 1.38245 * 120.34221 * 179.97438 * 5 4 2 7 7 C 1.38280 * 120.11890 * 0.02562 * 6 5 4 8 8 F 1.35094 * 120.11200 * 179.97438 * 7 6 5 9 9 C 1.39861 * 119.77903 * 359.97438 * 7 6 5 10 10 C 1.47686 * 120.16731 * 179.97438 * 9 7 6 11 11 O 1.21570 * 120.00143 * 359.97438 * 10 9 7 12 12 N 1.34777 * 120.00109 * 179.97438 * 10 9 7 13 13 C 1.46506 * 119.99873 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.85053 * 23.81070 * 13 12 10 15 15 C 1.53781 * 113.61132 * 155.00131 * 13 12 10 16 16 C 1.53785 * 87.08168 * 89.11771 * 15 13 12 17 17 H 1.09005 * 113.61450 * 270.88472 * 16 15 13 18 18 C 1.50699 * 113.61667 * 140.06126 * 16 15 13 19 19 C 1.38456 * 119.98542 * 119.72620 * 18 16 15 20 20 F 1.35099 * 120.01314 * 0.02562 * 19 18 16 21 21 C 1.38438 * 119.97090 * 179.70664 * 19 18 16 22 22 C 1.38395 * 119.95329 * 0.54754 * 21 19 18 23 23 F 1.35097 * 120.01353 * 179.72767 * 22 21 19 24 24 C 1.38501 * 119.97319 * 359.74741 * 22 21 19 25 25 C 1.38193 * 120.02397 * 359.97438 * 24 22 21 26 26 C 1.53782 * 113.61543 * 252.49944 * 13 12 10 27 27 C 1.37900 * 119.89569 * 65.25255 * 4 2 1 28 28 H 0.96702 * 113.99732 * 59.99928 * 1 2 3 29 29 H 1.09003 * 109.46909 * 239.99496 * 2 1 3 30 30 H 1.48506 * 110.00216 * 59.99985 * 3 2 1 31 31 H 1.48501 * 110.00224 * 181.32041 * 3 2 1 32 32 H 1.08004 * 119.82300 * 359.97019 * 5 4 2 33 33 H 1.08003 * 119.93990 * 179.97438 * 6 5 4 34 34 H 0.96995 * 120.00018 * 0.27596 * 12 10 9 35 35 H 1.09001 * 113.61611 * 203.66335 * 15 13 12 36 36 H 1.08999 * 113.61739 * 334.57290 * 15 13 12 37 37 H 1.08001 * 120.02346 * 180.29495 * 21 19 18 38 38 H 1.07994 * 119.98983 * 179.97438 * 24 22 21 39 39 H 1.07994 * 119.97215 * 180.02562 * 25 24 22 40 40 H 1.09002 * 113.61503 * 25.43252 * 26 13 12 41 41 H 1.08994 * 113.61294 * 156.33804 * 26 13 12 42 42 H 1.08004 * 120.05931 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6393 -0.0093 2.1911 6 6 3.1040 -0.6516 3.3237 7 6 2.8640 -2.0015 3.5036 8 9 3.3186 -2.6291 4.6101 9 6 2.1491 -2.7149 2.5360 10 6 1.8884 -4.1569 2.7191 11 8 2.2959 -4.7270 3.7125 12 7 1.1987 -4.8410 1.7849 13 6 0.9405 -6.2717 1.9663 14 1 0.9691 -6.5777 3.0121 15 6 -0.3014 -6.7741 1.2112 16 6 0.6295 -7.0393 0.0161 17 1 0.7365 -6.1847 -0.6520 18 6 0.3217 -8.3198 -0.7163 19 6 -0.0290 -8.2840 -2.0553 20 9 -0.0948 -7.1014 -2.7052 21 6 -0.3058 -9.4610 -2.7294 22 6 -0.2426 -10.6713 -2.0612 23 9 -0.5178 -11.8202 -2.7165 24 6 0.1025 -10.7042 -0.7203 25 6 0.3841 -9.5291 -0.0497 26 6 1.7726 -7.1706 1.0365 27 6 1.6885 -2.0581 1.3932 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4679 1.2085 31 1 3.5346 1.7702 -0.0322 32 1 2.8298 1.0451 2.0551 33 1 3.6561 -0.0982 4.0690 34 1 0.8770 -4.3871 0.9904 35 1 -0.7344 -7.6795 1.6366 36 1 -1.0423 -5.9971 1.0235 37 1 -0.5748 -9.4345 -3.7751 38 1 0.1514 -11.6485 -0.1985 39 1 0.6535 -9.5558 0.9957 40 1 2.7059 -6.7135 0.7076 41 1 1.9065 -8.1842 1.4141 42 1 1.1397 -2.6038 0.6399 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:11 Heat of formation + Delta-G solvation = -111.414365 kcal Electronic energy + Delta-G solvation = -31506.865962 eV Core-core repulsion = 26584.113373 eV Total energy + Delta-G solvation = -4922.752590 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.07130 -50.01144 -49.88931 -41.79265 -40.85297 -39.84036 -38.70080 -37.61707 -34.80562 -32.87960 -32.51391 -31.93794 -31.33939 -26.92024 -26.75200 -26.59164 -25.42730 -24.36074 -23.43498 -22.71161 -21.65134 -20.40672 -19.41620 -19.11459 -18.69520 -18.42435 -18.22695 -17.79372 -17.34863 -17.04915 -16.91591 -16.79059 -16.63458 -16.37965 -16.34168 -15.95522 -15.79494 -15.58370 -15.51552 -15.29485 -15.23301 -14.66129 -14.43921 -14.24119 -14.09739 -13.95985 -13.86999 -13.66732 -13.58319 -13.38388 -12.91062 -12.69832 -12.62324 -12.54271 -12.20240 -12.09719 -11.86528 -11.45824 -11.05296 -10.53651 -10.46730 -10.21804 -10.14343 -9.87215 -9.66139 -5.13201 -0.56985 -0.19310 -0.14307 -0.11743 1.08605 1.47797 1.59994 1.78655 1.87434 2.19030 2.40886 2.76802 2.96648 3.08852 3.16949 3.29460 3.34262 3.37613 3.42343 3.50193 3.53527 3.57976 3.71581 3.78895 3.83126 3.91854 3.96419 4.05569 4.12247 4.38012 4.45394 4.52153 4.58722 4.62270 4.64538 4.69483 4.74361 4.76521 4.78805 4.82054 4.85016 4.94249 4.95674 5.01030 5.13944 5.43055 5.48451 5.64212 6.30370 6.42264 7.06974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.683 3.317 4 C -0.094 4.094 5 C -0.066 4.066 6 C -0.155 4.155 7 C 0.168 3.832 8 F -0.109 7.109 9 C -0.174 4.174 10 C 0.564 3.436 11 O -0.516 6.516 12 N -0.708 5.708 13 C 0.121 3.879 14 H 0.111 0.889 15 C -0.134 4.134 16 C -0.076 4.076 17 H 0.103 0.897 18 C -0.115 4.115 19 C 0.133 3.867 20 F -0.129 7.129 21 C -0.190 4.190 22 C 0.127 3.873 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.142 4.142 27 C -0.028 4.028 28 H 0.386 0.614 29 H 0.079 0.921 30 H -0.248 1.248 31 H -0.252 1.252 32 H 0.134 0.866 33 H 0.150 0.850 34 H 0.401 0.599 35 H 0.102 0.898 36 H 0.080 0.920 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.146 0.854 40 H 0.078 0.922 41 H 0.099 0.901 42 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.544 3.361 -4.949 6.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.095 4.095 5 C -0.084 4.084 6 C -0.174 4.174 7 C 0.147 3.853 8 F -0.087 7.087 9 C -0.178 4.178 10 C 0.351 3.649 11 O -0.392 6.392 12 N -0.361 5.361 13 C 0.016 3.984 14 H 0.129 0.871 15 C -0.172 4.172 16 C -0.094 4.094 17 H 0.121 0.879 18 C -0.116 4.116 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.209 4.209 22 C 0.108 3.892 23 F -0.108 7.108 24 C -0.178 4.178 25 C -0.078 4.078 26 C -0.181 4.181 27 C -0.046 4.046 28 H 0.234 0.766 29 H 0.097 0.903 30 H -0.173 1.173 31 H -0.177 1.177 32 H 0.151 0.849 33 H 0.168 0.832 34 H 0.237 0.763 35 H 0.121 0.879 36 H 0.099 0.901 37 H 0.167 0.833 38 H 0.163 0.837 39 H 0.163 0.837 40 H 0.097 0.903 41 H 0.117 0.883 42 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.671 3.195 -3.239 4.599 hybrid contribution -0.113 -0.440 -0.522 0.692 sum -0.784 2.755 -3.761 4.728 Atomic orbital electron populations 1.86485 1.16850 1.81879 1.49960 1.24641 0.86050 1.10623 0.96881 0.94999 0.80978 0.77880 0.87723 1.19299 1.00136 0.93843 0.96187 1.20988 0.95518 0.99422 0.92422 1.21118 1.03656 0.92738 0.99867 1.17688 0.93999 0.90291 0.83276 1.91631 1.85723 1.82196 1.49165 1.20041 1.05814 0.94610 0.97328 1.17913 0.78205 0.85753 0.83026 1.90874 1.50026 1.69836 1.28476 1.45527 1.57102 1.09578 1.23843 1.21857 0.95796 0.79756 1.01029 0.87135 1.23456 0.96316 1.02556 0.94895 1.21566 0.97742 0.94734 0.95344 0.87861 1.19788 1.03053 0.96495 0.92235 1.17132 1.00665 0.80770 0.90044 1.91525 1.93662 1.44343 1.81183 1.21078 1.06910 0.90558 1.02389 1.17341 0.99774 0.81441 0.90645 1.91560 1.90958 1.47252 1.81064 1.21263 1.03062 1.00505 0.92933 1.20780 0.96535 0.89977 1.00497 1.23592 0.97694 1.01099 0.95701 1.21011 0.94839 0.93712 0.95068 0.76627 0.90274 1.17258 1.17661 0.84899 0.83222 0.76280 0.87937 0.90087 0.83289 0.83738 0.83668 0.90332 0.88288 0.84198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.17 12.81 -35.23 -0.45 0.72 16 2 C -0.07 0.17 2.79 36.00 0.10 0.27 16 3 Si 0.68 -2.02 29.84 -169.99 -5.07 -7.09 16 4 C -0.09 0.00 5.38 -104.68 -0.56 -0.57 16 5 C -0.07 -0.03 8.66 -39.51 -0.34 -0.37 16 6 C -0.16 -0.15 10.01 -39.56 -0.40 -0.55 16 7 C 0.17 0.52 7.29 -38.96 -0.28 0.24 16 8 F -0.11 -0.60 15.55 2.25 0.04 -0.56 16 9 C -0.17 -0.37 5.88 -104.91 -0.62 -0.99 16 10 C 0.56 1.74 7.77 -12.40 -0.10 1.64 16 11 O -0.52 -3.60 14.94 5.30 0.08 -3.52 16 12 N -0.71 0.27 5.21 -54.01 -0.28 -0.01 16 13 C 0.12 -0.12 4.32 -67.11 -0.29 -0.41 16 14 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 15 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 16 C -0.08 0.16 3.77 -90.95 -0.34 -0.18 16 17 H 0.10 -0.22 7.45 -51.93 -0.39 -0.61 16 18 C -0.11 0.12 5.30 -104.55 -0.55 -0.43 16 19 C 0.13 0.03 7.24 -39.43 -0.29 -0.25 16 20 F -0.13 -0.12 16.36 2.25 0.04 -0.09 16 21 C -0.19 -0.04 10.01 -39.45 -0.39 -0.44 16 22 C 0.13 0.06 7.30 -39.43 -0.29 -0.23 16 23 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 24 C -0.16 0.18 10.03 -39.50 -0.40 -0.21 16 25 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 26 C -0.14 0.26 7.26 -25.92 -0.19 0.07 16 27 C -0.03 0.00 9.17 -39.19 -0.36 -0.36 16 28 H 0.39 -2.66 8.74 45.56 0.40 -2.27 16 29 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 30 H -0.25 -0.04 7.05 56.52 0.40 0.36 16 31 H -0.25 0.13 7.11 56.52 0.40 0.53 16 32 H 0.13 -0.09 4.84 -52.48 -0.25 -0.34 16 33 H 0.15 -0.15 8.06 -52.48 -0.42 -0.57 16 34 H 0.40 -1.11 6.73 -40.82 -0.27 -1.38 16 35 H 0.10 -0.34 7.72 -51.93 -0.40 -0.74 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.14 -0.40 8.06 -52.49 -0.42 -0.82 16 39 H 0.15 -0.60 6.66 -52.49 -0.35 -0.95 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 42 H 0.14 -0.38 6.40 -52.48 -0.34 -0.72 16 LS Contribution 364.96 15.07 5.50 5.50 Total: 0.00 -8.95 364.96 -9.99 -18.94 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -4.05 Total: -10.87 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -5.83 Total: -2.82 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.28 Total: -0.01 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.37 Total: -2.79 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.11 Total: -0.84 kcal Atomic # 14 Polarization: -2.02 SS G_CDS: -5.07 Total: -7.09 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.95 -9.99 -18.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.477 kcal (2) G-P(sol) polarization free energy of solvation -8.948 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds