Wall clock time and date at job start Sun Mar 7 2021 00:05:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47187 * 2 1 4 4 C 1.50698 * 109.46805 * 239.99557 * 2 1 3 5 5 C 1.38235 * 120.00490 * 300.00274 * 4 2 1 6 6 C 1.38228 * 120.00115 * 179.97438 * 5 4 2 7 7 C 1.38240 * 120.00145 * 359.95863 * 6 5 4 8 8 C 1.50699 * 120.00036 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47304 * 89.99717 * 8 7 6 10 10 O 1.21280 * 120.00487 * 359.97438 * 9 8 7 11 11 N 1.34781 * 119.99783 * 180.02562 * 9 8 7 12 12 C 1.46504 * 119.99665 * 179.97438 * 11 9 8 13 13 H 1.08994 * 112.90940 * 336.24759 * 12 11 9 14 14 C 1.53779 * 113.61484 * 107.49929 * 12 11 9 15 15 C 1.53785 * 87.08093 * 89.11287 * 14 12 11 16 16 H 1.09002 * 113.61570 * 270.88522 * 15 14 12 17 17 C 1.50701 * 113.69000 * 139.98979 * 15 14 12 18 18 C 1.38460 * 119.98537 * 140.65869 * 17 15 14 19 19 F 1.35095 * 120.00810 * 0.02967 * 18 17 15 20 20 C 1.38441 * 119.97289 * 179.76781 * 18 17 15 21 21 C 1.38398 * 119.94756 * 0.48683 * 20 18 17 22 22 F 1.35097 * 120.01327 * 179.78756 * 21 20 18 23 23 C 1.38495 * 119.97581 * 359.77361 * 21 20 18 24 24 C 1.38183 * 120.02784 * 359.97438 * 23 21 20 25 25 C 1.53781 * 87.08241 * 25.43228 * 15 14 12 26 26 C 1.38238 * 119.99848 * 0.26968 * 7 6 5 27 27 C 1.38237 * 119.99836 * 359.52207 * 26 7 6 28 28 H 0.96703 * 113.99630 * 299.99745 * 1 2 3 29 29 H 1.08998 * 109.46768 * 120.00311 * 2 1 3 30 30 H 1.48504 * 109.99867 * 299.99981 * 3 2 1 31 31 H 1.48495 * 110.00201 * 61.31958 * 3 2 1 32 32 H 1.07998 * 119.99815 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.00296 * 179.97438 * 6 5 4 34 34 H 1.09003 * 109.47068 * 329.99611 * 8 7 6 35 35 H 1.09007 * 109.46773 * 209.99854 * 8 7 6 36 36 H 0.96996 * 120.00382 * 359.97438 * 11 9 8 37 37 H 1.09003 * 113.61775 * 334.57164 * 14 12 11 38 38 H 1.08996 * 113.61960 * 203.65890 * 14 12 11 39 39 H 1.07991 * 120.02736 * 180.25786 * 20 18 17 40 40 H 1.08001 * 119.98764 * 180.02562 * 23 21 20 41 41 H 1.07997 * 119.97482 * 180.02562 * 24 23 21 42 42 H 1.09005 * 113.61302 * 89.11252 * 25 15 14 43 43 H 1.08993 * 113.62030 * 220.02098 * 25 15 14 44 44 H 1.07997 * 119.99698 * 179.72633 * 26 7 6 45 45 H 1.07993 * 119.99917 * 180.25242 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5973 -2.0339 -1.4492 6 6 2.0576 -2.6854 -2.5781 7 6 2.8512 -2.0133 -3.4888 8 6 3.3526 -2.7234 -4.7198 9 6 2.3588 -2.5503 -5.8393 10 8 1.3431 -1.9135 -5.6556 11 7 2.5982 -3.1042 -7.0445 12 6 1.6317 -2.9364 -8.1327 13 1 0.6231 -2.7281 -7.7760 14 6 2.1061 -1.9749 -9.2351 15 6 2.7431 -3.1969 -9.9176 16 1 3.7659 -3.3930 -9.5960 17 6 2.5901 -3.2013 -11.4169 18 6 3.6359 -3.6275 -12.2180 19 9 4.7930 -4.0399 -11.6557 20 6 3.4933 -3.6360 -13.5950 21 6 2.3090 -3.2088 -14.1696 22 9 2.1700 -3.2125 -15.5134 23 6 1.2662 -2.7779 -13.3665 24 6 1.4077 -2.7747 -11.9920 25 6 1.6935 -4.0525 -9.1889 26 6 3.1891 -0.6912 -3.2676 27 6 2.7252 -0.0384 -2.1409 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 0.8900 30 1 1.5615 2.4679 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 0.9767 -2.5589 -0.7381 33 1 1.7970 -3.7195 -2.7488 34 1 3.4743 -3.7846 -4.5028 35 1 4.3124 -2.3009 -5.0173 36 1 3.4103 -3.6138 -7.1914 37 1 2.8329 -1.2394 -8.8901 38 1 1.2917 -1.5305 -9.8072 39 1 4.3070 -3.9721 -14.2204 40 1 0.3417 -2.4449 -13.8147 41 1 0.5938 -2.4389 -11.3665 42 1 0.7661 -4.1761 -9.7482 43 1 2.0869 -4.9943 -8.8064 44 1 3.8128 -0.1674 -3.9769 45 1 2.9859 0.9956 -1.9702 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:15 Heat of formation + Delta-G solvation = -77.269254 kcal Electronic energy + Delta-G solvation = -30179.949192 eV Core-core repulsion = 25572.593601 eV Total energy + Delta-G solvation = -4607.355590 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.132 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -50.06884 -50.00970 -41.67519 -40.76145 -39.90798 -38.72763 -37.65839 -34.58901 -34.05402 -31.99019 -31.86256 -31.58101 -29.74131 -26.89822 -26.48182 -25.50467 -24.33145 -23.73255 -23.04020 -22.25722 -21.31758 -20.34781 -19.36543 -18.49413 -18.41239 -18.12866 -17.61929 -17.17376 -17.04634 -16.95231 -16.88040 -16.65728 -16.33917 -16.13710 -15.95529 -15.54209 -15.36720 -15.34080 -15.15563 -14.68647 -14.60925 -14.31977 -14.10821 -13.91735 -13.84286 -13.67003 -13.58671 -13.33628 -13.14906 -13.03474 -12.80586 -12.65773 -12.20386 -12.14546 -11.87044 -11.83542 -11.64457 -11.44147 -10.89673 -10.46723 -10.20240 -10.09890 -9.77191 -9.65583 -9.51874 -4.93823 -0.18992 -0.11521 0.31412 0.55853 1.31970 1.62909 1.63540 2.00465 2.05102 2.19434 2.76998 2.79468 3.19042 3.35223 3.38527 3.39484 3.49672 3.54799 3.62174 3.72307 3.79107 3.85441 3.90629 3.93025 3.98032 4.06509 4.09589 4.23741 4.38836 4.46381 4.47683 4.53603 4.55257 4.62186 4.68387 4.72741 4.76658 4.77791 4.82639 4.86400 4.95828 4.96736 5.06240 5.15352 5.16199 5.45727 5.50951 5.64151 5.64557 5.65622 6.07330 6.43191 6.47919 7.22342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.681 3.319 4 C -0.072 4.072 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.065 4.065 8 C -0.103 4.103 9 C 0.516 3.484 10 O -0.523 6.523 11 N -0.717 5.717 12 C 0.121 3.879 13 H 0.107 0.893 14 C -0.142 4.142 15 C -0.075 4.075 16 H 0.104 0.896 17 C -0.115 4.115 18 C 0.133 3.867 19 F -0.129 7.129 20 C -0.190 4.190 21 C 0.127 3.873 22 F -0.130 7.130 23 C -0.159 4.159 24 C -0.060 4.060 25 C -0.135 4.135 26 C -0.099 4.099 27 C -0.112 4.112 28 H 0.379 0.621 29 H 0.076 0.924 30 H -0.255 1.255 31 H -0.262 1.262 32 H 0.124 0.876 33 H 0.122 0.878 34 H 0.106 0.894 35 H 0.106 0.894 36 H 0.402 0.598 37 H 0.077 0.923 38 H 0.096 0.904 39 H 0.149 0.851 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.100 0.900 43 H 0.079 0.921 44 H 0.125 0.875 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.710 -1.843 1.292 4.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.582 3.418 4 C -0.073 4.073 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.065 4.065 8 C -0.142 4.142 9 C 0.303 3.697 10 O -0.398 6.398 11 N -0.369 5.369 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.181 4.181 15 C -0.093 4.093 16 H 0.122 0.878 17 C -0.116 4.116 18 C 0.114 3.886 19 F -0.107 7.107 20 C -0.209 4.209 21 C 0.108 3.892 22 F -0.108 7.108 23 C -0.178 4.178 24 C -0.078 4.078 25 C -0.173 4.173 26 C -0.117 4.117 27 C -0.130 4.130 28 H 0.227 0.773 29 H 0.094 0.906 30 H -0.180 1.180 31 H -0.187 1.187 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.124 0.876 35 H 0.124 0.876 36 H 0.236 0.764 37 H 0.096 0.904 38 H 0.114 0.886 39 H 0.167 0.833 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.118 0.882 43 H 0.098 0.902 44 H 0.143 0.857 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.884 -0.863 0.856 3.130 hybrid contribution -0.458 -0.540 0.040 0.709 sum 2.426 -1.403 0.895 2.942 Atomic orbital electron populations 1.86611 1.17819 1.80092 1.49695 1.24809 0.84459 1.10921 0.98373 0.95160 0.91683 0.74736 0.80224 1.19237 0.98233 0.94379 0.95409 1.20924 0.98386 0.93968 0.97480 1.20990 0.97080 1.00015 0.94084 1.19247 0.98342 0.94267 0.94675 1.20688 0.98827 1.03029 0.91702 1.20621 0.87435 0.78681 0.82983 1.90774 1.27629 1.39251 1.82119 1.45707 1.24378 1.55875 1.10985 1.21804 0.94350 0.96205 0.86119 0.87496 1.23578 1.01238 0.96397 0.96879 1.21559 1.00464 0.98288 0.89006 0.87815 1.19810 0.93553 1.02296 0.95928 1.17138 0.82467 0.98801 0.90226 1.91525 1.46346 1.87629 1.85209 1.21080 0.99266 1.06317 0.94285 1.17339 0.94376 1.00013 0.77489 1.91560 1.96083 1.94029 1.29171 1.21259 0.99414 1.03200 0.93913 1.20771 0.96704 0.96500 0.93817 1.23447 0.99708 0.97734 0.96390 1.20875 1.00064 0.93769 0.97001 1.20870 0.98623 0.99185 0.94304 0.77339 0.90600 1.17977 1.18719 0.85777 0.85974 0.87614 0.87568 0.76351 0.90424 0.88553 0.83303 0.83754 0.83713 0.88188 0.90202 0.85698 0.85584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.30 12.74 -35.23 -0.45 -1.75 16 2 C -0.08 -0.07 2.81 36.00 0.10 0.03 16 3 Si 0.68 0.01 29.79 -169.99 -5.06 -5.06 16 4 C -0.07 -0.18 5.42 -104.62 -0.57 -0.75 16 5 C -0.09 -0.23 9.61 -39.59 -0.38 -0.61 16 6 C -0.10 -0.18 9.70 -39.58 -0.38 -0.56 16 7 C -0.06 -0.07 4.37 -104.62 -0.46 -0.53 16 8 C -0.10 0.19 5.83 -29.04 -0.17 0.02 16 9 C 0.52 0.36 7.82 -10.99 -0.09 0.28 16 10 O -0.52 -2.91 15.64 5.56 0.09 -2.82 16 11 N -0.72 1.39 5.26 -53.02 -0.28 1.11 16 12 C 0.12 -0.19 4.32 -67.11 -0.29 -0.48 16 13 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 14 C -0.14 0.29 7.26 -25.92 -0.19 0.10 16 15 C -0.07 0.17 3.78 -90.96 -0.34 -0.17 16 16 H 0.10 -0.25 7.42 -51.93 -0.39 -0.63 16 17 C -0.11 0.12 5.30 -104.54 -0.55 -0.43 16 18 C 0.13 0.04 7.25 -39.42 -0.29 -0.25 16 19 F -0.13 -0.13 16.35 2.25 0.04 -0.10 16 20 C -0.19 -0.05 10.01 -39.45 -0.39 -0.45 16 21 C 0.13 0.07 7.30 -39.43 -0.29 -0.22 16 22 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 23 C -0.16 0.17 10.02 -39.51 -0.40 -0.22 16 24 C -0.06 0.12 8.54 -39.60 -0.34 -0.22 16 25 C -0.13 0.39 7.29 -25.92 -0.19 0.21 16 26 C -0.10 -0.13 9.70 -39.58 -0.38 -0.51 16 27 C -0.11 -0.19 8.67 -39.58 -0.34 -0.54 16 28 H 0.38 -0.66 8.74 45.56 0.40 -0.26 16 29 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 30 H -0.26 -0.90 7.11 56.52 0.40 -0.49 16 31 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 32 H 0.12 0.21 8.06 -52.49 -0.42 -0.21 16 33 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 34 H 0.11 -0.42 8.09 -51.93 -0.42 -0.84 16 35 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 36 H 0.40 -1.83 8.70 -40.82 -0.36 -2.19 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.10 -0.26 6.40 -51.93 -0.33 -0.59 16 39 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 40 H 0.14 -0.39 8.06 -52.49 -0.42 -0.81 16 41 H 0.15 -0.58 6.72 -52.49 -0.35 -0.93 16 42 H 0.10 -0.34 7.64 -51.93 -0.40 -0.73 16 43 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 44 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 45 H 0.13 -0.02 4.88 -52.49 -0.26 -0.27 16 LS Contribution 384.95 15.07 5.80 5.80 Total: 0.00 -9.45 384.95 -11.24 -20.70 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -5.48 Total: -12.38 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: -5.94 Total: -5.31 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -0.28 Total: 1.11 kcal Atomic # 8 Polarization: -4.21 SS G_CDS: -0.36 Total: -4.57 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.08 Total: -0.30 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.06 Total: -5.06 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -9.45 -11.24 -20.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.574 kcal (2) G-P(sol) polarization free energy of solvation -9.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.695 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds