Wall clock time and date at job start Sun Mar 7 2021 00:05:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47187 * 2 1 4 4 C 1.50698 * 109.46805 * 239.99557 * 2 1 3 5 5 C 1.38235 * 120.00490 * 300.00274 * 4 2 1 6 6 C 1.38228 * 120.00115 * 179.97438 * 5 4 2 7 7 C 1.38240 * 120.00145 * 359.95863 * 6 5 4 8 8 C 1.50699 * 120.00036 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47304 * 89.99717 * 8 7 6 10 10 O 1.21280 * 120.00487 * 359.97438 * 9 8 7 11 11 N 1.34781 * 119.99783 * 180.02562 * 9 8 7 12 12 C 1.46504 * 119.99665 * 179.97438 * 11 9 8 13 13 H 1.08994 * 112.90940 * 336.24759 * 12 11 9 14 14 C 1.53779 * 113.61484 * 107.49929 * 12 11 9 15 15 C 1.53785 * 87.08093 * 89.11287 * 14 12 11 16 16 H 1.09002 * 113.61570 * 270.88522 * 15 14 12 17 17 C 1.50701 * 113.69000 * 139.98979 * 15 14 12 18 18 C 1.38460 * 119.98537 * 140.65869 * 17 15 14 19 19 F 1.35095 * 120.00810 * 0.02967 * 18 17 15 20 20 C 1.38441 * 119.97289 * 179.76781 * 18 17 15 21 21 C 1.38398 * 119.94756 * 0.48683 * 20 18 17 22 22 F 1.35097 * 120.01327 * 179.78756 * 21 20 18 23 23 C 1.38495 * 119.97581 * 359.77361 * 21 20 18 24 24 C 1.38183 * 120.02784 * 359.97438 * 23 21 20 25 25 C 1.53781 * 87.08241 * 25.43228 * 15 14 12 26 26 C 1.38238 * 119.99848 * 0.26968 * 7 6 5 27 27 C 1.38237 * 119.99836 * 359.52207 * 26 7 6 28 28 H 0.96703 * 113.99630 * 299.99745 * 1 2 3 29 29 H 1.08998 * 109.46768 * 120.00311 * 2 1 3 30 30 H 1.48504 * 109.99867 * 299.99981 * 3 2 1 31 31 H 1.48495 * 110.00201 * 61.31958 * 3 2 1 32 32 H 1.07998 * 119.99815 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.00296 * 179.97438 * 6 5 4 34 34 H 1.09003 * 109.47068 * 329.99611 * 8 7 6 35 35 H 1.09007 * 109.46773 * 209.99854 * 8 7 6 36 36 H 0.96996 * 120.00382 * 359.97438 * 11 9 8 37 37 H 1.09003 * 113.61775 * 334.57164 * 14 12 11 38 38 H 1.08996 * 113.61960 * 203.65890 * 14 12 11 39 39 H 1.07991 * 120.02736 * 180.25786 * 20 18 17 40 40 H 1.08001 * 119.98764 * 180.02562 * 23 21 20 41 41 H 1.07997 * 119.97482 * 180.02562 * 24 23 21 42 42 H 1.09005 * 113.61302 * 89.11252 * 25 15 14 43 43 H 1.08993 * 113.62030 * 220.02098 * 25 15 14 44 44 H 1.07997 * 119.99698 * 179.72633 * 26 7 6 45 45 H 1.07993 * 119.99917 * 180.25242 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5973 -2.0339 -1.4492 6 6 2.0576 -2.6854 -2.5781 7 6 2.8512 -2.0133 -3.4888 8 6 3.3526 -2.7234 -4.7198 9 6 2.3588 -2.5503 -5.8393 10 8 1.3431 -1.9135 -5.6556 11 7 2.5982 -3.1042 -7.0445 12 6 1.6317 -2.9364 -8.1327 13 1 0.6231 -2.7281 -7.7760 14 6 2.1061 -1.9749 -9.2351 15 6 2.7431 -3.1969 -9.9176 16 1 3.7659 -3.3930 -9.5960 17 6 2.5901 -3.2013 -11.4169 18 6 3.6359 -3.6275 -12.2180 19 9 4.7930 -4.0399 -11.6557 20 6 3.4933 -3.6360 -13.5950 21 6 2.3090 -3.2088 -14.1696 22 9 2.1700 -3.2125 -15.5134 23 6 1.2662 -2.7779 -13.3665 24 6 1.4077 -2.7747 -11.9920 25 6 1.6935 -4.0525 -9.1889 26 6 3.1891 -0.6912 -3.2676 27 6 2.7252 -0.0384 -2.1409 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 0.8900 30 1 1.5615 2.4679 -1.2085 31 1 1.5880 2.4585 1.2242 32 1 0.9767 -2.5589 -0.7381 33 1 1.7970 -3.7195 -2.7488 34 1 3.4743 -3.7846 -4.5028 35 1 4.3124 -2.3009 -5.0173 36 1 3.4103 -3.6138 -7.1914 37 1 2.8329 -1.2394 -8.8901 38 1 1.2917 -1.5305 -9.8072 39 1 4.3070 -3.9721 -14.2204 40 1 0.3417 -2.4449 -13.8147 41 1 0.5938 -2.4389 -11.3665 42 1 0.7661 -4.1761 -9.7482 43 1 2.0869 -4.9943 -8.8064 44 1 3.8128 -0.1674 -3.9769 45 1 2.9859 0.9956 -1.9702 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:14 Heat of formation + Delta-G solvation = -74.149297 kcal Electronic energy + Delta-G solvation = -30179.813900 eV Core-core repulsion = 25572.593601 eV Total energy + Delta-G solvation = -4607.220299 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.132 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.07859 -50.05318 -41.60365 -40.75396 -39.92461 -38.68473 -37.75362 -34.59587 -34.05258 -31.93733 -31.90322 -31.51550 -29.71114 -26.71375 -26.42809 -25.48396 -24.25970 -23.80019 -22.97878 -22.25809 -21.32375 -20.23271 -19.34430 -18.59401 -18.37594 -18.09526 -17.62946 -17.09429 -17.05628 -16.92040 -16.87356 -16.65162 -16.37855 -16.16082 -15.97306 -15.53197 -15.34172 -15.28403 -15.18201 -14.67230 -14.63280 -14.35977 -14.01484 -13.97728 -13.78646 -13.57712 -13.47401 -13.39404 -13.14257 -12.97793 -12.75567 -12.57165 -12.26360 -12.04665 -11.90374 -11.75100 -11.71161 -11.31107 -10.99041 -10.53328 -10.13608 -10.03841 -9.85890 -9.60262 -9.57599 -4.96591 -0.13631 -0.04370 0.24707 0.47057 1.27886 1.57004 1.63905 1.93083 2.14556 2.27091 2.75793 2.81453 3.30198 3.39832 3.44932 3.48898 3.64623 3.66667 3.68240 3.86099 3.86907 3.91158 3.94169 4.05280 4.07227 4.08028 4.17774 4.32956 4.46542 4.50405 4.62191 4.64157 4.70077 4.73821 4.74489 4.82468 4.85471 4.90623 4.92183 5.01021 5.03853 5.06871 5.10317 5.13753 5.28823 5.39185 5.55721 5.60062 5.62700 5.71712 6.02982 6.56230 6.56812 7.28828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.088 4.088 3 Si 0.767 3.233 4 C -0.092 4.092 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.072 4.072 8 C -0.098 4.098 9 C 0.515 3.485 10 O -0.579 6.579 11 N -0.703 5.703 12 C 0.115 3.885 13 H 0.086 0.914 14 C -0.139 4.139 15 C -0.070 4.070 16 H 0.106 0.894 17 C -0.112 4.112 18 C 0.117 3.883 19 F -0.136 7.136 20 C -0.198 4.198 21 C 0.107 3.893 22 F -0.142 7.142 23 C -0.156 4.156 24 C -0.057 4.057 25 C -0.123 4.123 26 C -0.110 4.110 27 C -0.126 4.126 28 H 0.394 0.606 29 H 0.096 0.904 30 H -0.306 1.306 31 H -0.283 1.283 32 H 0.124 0.876 33 H 0.134 0.866 34 H 0.132 0.868 35 H 0.134 0.866 36 H 0.417 0.583 37 H 0.069 0.931 38 H 0.104 0.896 39 H 0.151 0.849 40 H 0.161 0.839 41 H 0.169 0.831 42 H 0.108 0.892 43 H 0.087 0.913 44 H 0.143 0.857 45 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.391 -2.390 1.377 5.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.196 4.196 3 Si 0.672 3.328 4 C -0.092 4.092 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.073 4.073 8 C -0.137 4.137 9 C 0.303 3.697 10 O -0.458 6.458 11 N -0.356 5.356 12 C 0.009 3.991 13 H 0.104 0.896 14 C -0.177 4.177 15 C -0.088 4.088 16 H 0.124 0.876 17 C -0.113 4.113 18 C 0.098 3.902 19 F -0.114 7.114 20 C -0.218 4.218 21 C 0.088 3.912 22 F -0.121 7.121 23 C -0.174 4.174 24 C -0.074 4.074 25 C -0.161 4.161 26 C -0.128 4.128 27 C -0.143 4.143 28 H 0.244 0.756 29 H 0.114 0.886 30 H -0.234 1.234 31 H -0.211 1.211 32 H 0.142 0.858 33 H 0.152 0.848 34 H 0.150 0.850 35 H 0.152 0.848 36 H 0.255 0.745 37 H 0.088 0.912 38 H 0.122 0.878 39 H 0.169 0.831 40 H 0.178 0.822 41 H 0.186 0.814 42 H 0.126 0.874 43 H 0.105 0.895 44 H 0.161 0.839 45 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 3.607 -1.457 0.940 4.002 hybrid contribution -0.715 -0.360 -0.024 0.800 sum 2.892 -1.816 0.916 3.536 Atomic orbital electron populations 1.86564 1.18814 1.80657 1.51010 1.25061 0.83859 1.11944 0.98743 0.94214 0.90296 0.72134 0.76116 1.19502 0.98755 0.94682 0.96277 1.21095 0.99023 0.94402 0.98161 1.21250 0.97220 1.00795 0.94104 1.19588 0.97806 0.94435 0.95450 1.20767 0.98920 1.04523 0.89464 1.21047 0.86975 0.77749 0.83903 1.90757 1.30025 1.41957 1.83099 1.45615 1.24708 1.55027 1.10220 1.21800 0.93544 0.97364 0.86366 0.89583 1.23573 1.01268 0.96231 0.96675 1.21537 1.00808 0.98248 0.88186 0.87556 1.19991 0.93352 1.01496 0.96441 1.17288 0.82728 0.99800 0.90381 1.91501 1.46820 1.87866 1.85261 1.21171 0.99497 1.06488 0.94596 1.17562 0.95157 1.01321 0.77188 1.91524 1.96185 1.94292 1.30094 1.21508 0.99495 1.02237 0.94199 1.21047 0.96986 0.95687 0.93718 1.23410 0.99843 0.97439 0.95431 1.21216 1.00220 0.94174 0.97155 1.21118 0.98787 0.99847 0.94583 0.75582 0.88609 1.23394 1.21059 0.85821 0.84776 0.85039 0.84770 0.74549 0.91236 0.87782 0.83089 0.82155 0.81383 0.87382 0.89451 0.83908 0.84463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.24 12.74 -148.98 -1.90 -5.14 16 2 C -0.09 -0.22 2.81 71.24 0.20 -0.02 16 3 Si 0.77 0.38 29.79 68.60 2.04 2.43 16 4 C -0.09 -0.54 5.42 -19.87 -0.11 -0.64 16 5 C -0.11 -0.67 9.61 22.27 0.21 -0.46 16 6 C -0.12 -0.46 9.70 22.27 0.22 -0.24 16 7 C -0.07 -0.15 4.37 -19.86 -0.09 -0.24 16 8 C -0.10 0.49 5.83 29.10 0.17 0.66 16 9 C 0.52 0.53 7.82 87.66 0.69 1.21 16 10 O -0.58 -6.98 15.64 -3.03 -0.05 -7.03 16 11 N -0.70 3.37 5.26 -440.03 -2.32 1.05 16 12 C 0.12 -0.41 4.32 45.52 0.20 -0.21 16 13 H 0.09 0.12 7.47 -2.39 -0.02 0.10 16 14 C -0.14 0.66 7.26 31.12 0.23 0.89 16 15 C -0.07 0.40 3.78 -11.01 -0.04 0.36 16 16 H 0.11 -0.64 7.42 -2.39 -0.02 -0.65 16 17 C -0.11 0.33 5.30 -19.81 -0.10 0.23 16 18 C 0.12 0.07 7.25 22.37 0.16 0.23 16 19 F -0.14 -0.29 16.35 44.97 0.74 0.44 16 20 C -0.20 -0.23 10.01 22.36 0.22 -0.01 16 21 C 0.11 0.15 7.30 22.37 0.16 0.31 16 22 F -0.14 -0.64 17.27 44.97 0.78 0.14 16 23 C -0.16 0.45 10.02 22.32 0.22 0.67 16 24 C -0.06 0.29 8.54 22.25 0.19 0.48 16 25 C -0.12 0.88 7.29 31.12 0.23 1.11 16 26 C -0.11 -0.29 9.70 22.27 0.22 -0.07 16 27 C -0.13 -0.52 8.67 22.27 0.19 -0.32 16 28 H 0.39 -1.12 8.74 -74.06 -0.65 -1.76 16 29 H 0.10 -0.19 7.96 -2.39 -0.02 -0.21 16 30 H -0.31 -2.70 7.11 99.48 0.71 -2.00 16 31 H -0.28 -1.09 7.11 99.48 0.71 -0.39 16 32 H 0.12 0.61 8.06 -2.91 -0.02 0.58 16 33 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 34 H 0.13 -1.33 8.09 -2.39 -0.02 -1.35 16 35 H 0.13 -1.42 8.08 -2.38 -0.02 -1.44 16 36 H 0.42 -4.54 8.70 -92.71 -0.81 -5.35 16 37 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 38 H 0.10 -0.66 6.40 -2.39 -0.02 -0.68 16 39 H 0.15 -0.06 8.06 -2.92 -0.02 -0.08 16 40 H 0.16 -1.05 8.06 -2.91 -0.02 -1.07 16 41 H 0.17 -1.69 6.72 -2.91 -0.02 -1.71 16 42 H 0.11 -0.91 7.64 -2.38 -0.02 -0.93 16 43 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 44 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 45 H 0.14 0.06 4.88 -2.91 -0.01 0.04 16 Total: 0.00 -24.41 384.95 2.10 -22.31 By element: Atomic # 1 Polarization: -17.77 SS G_CDS: -0.36 Total: -18.13 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: 3.17 Total: 3.92 kcal Atomic # 7 Polarization: 3.37 SS G_CDS: -2.32 Total: 1.05 kcal Atomic # 8 Polarization: -10.22 SS G_CDS: -1.95 Total: -12.17 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 1.51 Total: 0.58 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.04 Total: 2.43 kcal Total: -24.41 2.10 -22.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.838 kcal (2) G-P(sol) polarization free energy of solvation -24.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.311 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds