Wall clock time and date at job start Sun Mar 7 2021 00:05:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86305 * 109.46917 * 2 1 4 4 C 1.50697 * 109.46915 * 120.00327 * 2 1 3 5 5 C 1.34456 * 126.47697 * 255.02361 * 4 2 1 6 6 N 1.36563 * 109.98126 * 179.97438 * 5 4 2 7 7 C 1.37823 * 109.86264 * 0.02562 * 6 5 4 8 8 C 1.38648 * 133.38016 * 180.02562 * 7 6 5 9 9 C 1.39322 * 119.66601 * 179.97438 * 8 7 6 10 10 C 1.47579 * 119.83115 * 179.97438 * 9 8 7 11 11 O 1.21595 * 119.99870 * 359.97438 * 10 9 8 12 12 N 1.34772 * 120.00183 * 180.02562 * 10 9 8 13 13 C 1.46506 * 120.00033 * 180.02562 * 12 10 9 14 14 H 1.08992 * 112.90684 * 336.24748 * 13 12 10 15 15 C 1.54049 * 113.61276 * 107.61836 * 13 12 10 16 16 C 1.53781 * 87.08031 * 89.07129 * 15 13 12 17 17 H 1.09003 * 113.69043 * 270.86777 * 16 15 13 18 18 C 1.50698 * 113.61565 * 139.97986 * 16 15 13 19 19 C 1.38449 * 119.98847 * 142.50394 * 18 16 15 20 20 F 1.35095 * 120.01181 * 359.95283 * 19 18 16 21 21 C 1.38442 * 119.97212 * 179.97438 * 19 18 16 22 22 C 1.38400 * 119.95068 * 0.02562 * 21 19 18 23 23 F 1.35099 * 120.01137 * 179.97438 * 22 21 19 24 24 C 1.38490 * 119.97575 * 359.97438 * 22 21 19 25 25 C 1.38192 * 120.02317 * 359.74212 * 24 22 21 26 26 C 1.53781 * 87.08070 * 25.42738 * 16 15 13 27 27 C 1.40194 * 120.33733 * 0.24985 * 9 8 7 28 28 C 1.36241 * 120.37550 * 359.48092 * 27 9 8 29 29 C 1.39875 * 119.96074 * 0.52068 * 28 27 9 30 30 H 0.96694 * 114.00086 * 299.99422 * 1 2 3 31 31 H 1.09006 * 109.47018 * 240.00369 * 2 1 3 32 32 H 1.48493 * 109.99738 * 178.68044 * 3 2 1 33 33 H 1.48499 * 110.00156 * 300.00182 * 3 2 1 34 34 H 1.08003 * 125.01133 * 359.94390 * 5 4 2 35 35 H 0.97005 * 125.06968 * 180.02562 * 6 5 4 36 36 H 1.08006 * 120.16629 * 359.96963 * 8 7 6 37 37 H 0.97002 * 120.00078 * 359.97438 * 12 10 9 38 38 H 1.09005 * 113.62125 * 334.52173 * 15 13 12 39 39 H 1.08996 * 113.68970 * 203.62749 * 15 13 12 40 40 H 1.08000 * 120.02560 * 179.97438 * 21 19 18 41 41 H 1.07996 * 119.99021 * 180.02562 * 24 22 21 42 42 H 1.08003 * 119.97006 * 180.25544 * 25 24 22 43 43 H 1.09002 * 113.61445 * 89.11830 * 26 16 15 44 44 H 1.09002 * 113.61408 * 219.93560 * 26 16 15 45 45 H 1.07998 * 119.81424 * 179.74377 * 27 9 8 46 46 H 1.08001 * 120.01320 * 180.27668 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4612 -0.1363 2.3247 6 7 2.8026 -1.0947 3.2356 7 6 2.4945 -2.3431 2.7397 8 6 2.6305 -3.6279 3.2429 9 6 2.2131 -4.7155 2.4787 10 6 2.3567 -6.0846 3.0106 11 8 2.8387 -6.2612 4.1129 12 7 1.9545 -7.1393 2.2741 13 6 2.0966 -8.4984 2.8023 14 1 2.8742 -8.5793 3.5618 15 6 0.7595 -9.1432 3.2141 16 6 0.6527 -9.6577 1.7689 17 1 0.1530 -8.9639 1.0928 18 6 0.1173 -11.0626 1.6662 19 6 -0.7327 -11.4051 0.6284 20 9 -1.0829 -10.4798 -0.2916 21 6 -1.2239 -12.6960 0.5340 22 6 -0.8650 -13.6425 1.4778 23 9 -1.3440 -14.9025 1.3872 24 6 -0.0146 -13.2977 2.5150 25 6 0.4798 -12.0103 2.6049 26 6 2.1873 -9.5773 1.7102 27 6 1.6628 -4.5164 1.2048 28 6 1.5205 -3.2570 0.7050 29 6 1.9349 -2.1548 1.4600 30 1 -0.3933 0.4416 0.7650 31 1 1.7924 -0.5138 -0.8901 32 1 3.5345 1.7703 0.0321 33 1 1.5614 2.4680 -1.2084 34 1 2.5972 0.9262 2.4627 35 1 3.2023 -0.9225 4.1026 36 1 3.0579 -3.7847 4.2223 37 1 1.5704 -6.9985 1.3946 38 1 -0.0116 -8.4193 3.4780 39 1 0.8655 -9.9371 3.9534 40 1 -1.8873 -12.9640 -0.2749 41 1 0.2659 -14.0362 3.2514 42 1 1.1462 -11.7434 3.4118 43 1 2.6852 -10.4898 2.0383 44 1 2.5691 -9.2052 0.7595 45 1 1.3458 -5.3658 0.6180 46 1 1.0917 -3.1100 -0.2753 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:20 Heat of formation + Delta-G solvation = -38.913871 kcal Electronic energy + Delta-G solvation = -33412.821987 eV Core-core repulsion = 28485.251419 eV Total energy + Delta-G solvation = -4927.570568 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.128 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -50.03560 -49.98716 -42.50214 -41.58513 -40.29720 -38.82583 -37.84339 -37.43383 -34.60219 -33.26342 -31.99316 -31.65207 -30.72782 -30.38749 -26.86747 -26.65297 -26.32635 -24.85749 -24.15240 -23.63760 -22.87719 -21.59549 -20.84216 -20.33748 -19.50252 -19.28822 -18.44341 -18.18663 -17.64324 -17.43111 -17.02495 -17.01589 -16.88866 -16.60295 -16.31714 -16.24111 -15.94306 -15.89247 -15.58673 -15.48672 -15.30767 -15.12201 -15.06283 -14.74332 -14.70793 -14.37186 -14.04917 -14.02234 -13.83772 -13.62556 -13.53453 -13.13623 -12.91233 -12.62970 -12.60755 -12.32103 -12.24628 -12.15593 -11.92912 -11.81001 -11.41563 -10.94599 -10.76407 -10.36396 -10.18029 -10.09291 -9.63116 -9.36697 -8.82520 -5.11243 -0.27733 -0.16299 -0.08960 0.38500 1.27605 1.35628 1.61016 1.84557 1.96204 1.98631 2.17680 2.22108 2.79856 2.91644 3.21489 3.37647 3.41230 3.51496 3.53900 3.56739 3.58352 3.70765 3.75038 3.76494 3.82453 3.84894 3.96076 4.07177 4.10908 4.30276 4.41269 4.46486 4.50753 4.54297 4.56026 4.65272 4.70233 4.72647 4.76753 4.79878 4.85300 4.90050 4.97212 4.98355 4.99607 5.18509 5.22359 5.42494 5.44432 5.54891 5.59888 5.67109 5.97365 6.34998 6.45925 6.64308 7.21125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.685 3.315 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.055 4.055 9 C -0.122 4.122 10 C 0.567 3.433 11 O -0.536 6.536 12 N -0.710 5.710 13 C 0.121 3.879 14 H 0.109 0.891 15 C -0.143 4.143 16 C -0.076 4.076 17 H 0.104 0.896 18 C -0.114 4.114 19 C 0.133 3.867 20 F -0.128 7.128 21 C -0.190 4.190 22 C 0.127 3.873 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.135 4.135 27 C -0.113 4.113 28 C -0.072 4.072 29 C -0.063 4.063 30 H 0.377 0.623 31 H 0.111 0.889 32 H -0.256 1.256 33 H -0.254 1.254 34 H 0.179 0.821 35 H 0.422 0.578 36 H 0.136 0.864 37 H 0.402 0.598 38 H 0.078 0.922 39 H 0.098 0.902 40 H 0.149 0.851 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.101 0.899 44 H 0.080 0.920 45 H 0.125 0.875 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.678 3.365 1.784 3.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.127 4.127 10 C 0.356 3.644 11 O -0.413 6.413 12 N -0.361 5.361 13 C 0.016 3.984 14 H 0.127 0.873 15 C -0.181 4.181 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.115 4.115 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.210 4.210 22 C 0.108 3.892 23 F -0.109 7.109 24 C -0.178 4.178 25 C -0.078 4.078 26 C -0.173 4.173 27 C -0.133 4.133 28 C -0.091 4.091 29 C -0.068 4.068 30 H 0.224 0.776 31 H 0.129 0.871 32 H -0.181 1.181 33 H -0.179 1.179 34 H 0.196 0.804 35 H 0.260 0.740 36 H 0.154 0.846 37 H 0.238 0.762 38 H 0.097 0.903 39 H 0.116 0.884 40 H 0.167 0.833 41 H 0.162 0.838 42 H 0.163 0.837 43 H 0.119 0.881 44 H 0.098 0.902 45 H 0.143 0.857 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.631 3.550 1.668 4.248 hybrid contribution -0.213 -0.646 -0.502 0.845 sum 1.418 2.904 1.166 3.436 Atomic orbital electron populations 1.86508 1.17409 1.81758 1.49011 1.24335 0.84769 1.08860 0.96169 0.95278 0.80738 0.77362 0.88024 1.20734 1.10822 0.92132 0.98195 1.21754 0.99725 0.94350 0.89306 1.41720 1.54696 1.04010 1.18179 1.18072 1.03260 0.86314 0.94867 1.20075 0.99369 0.88070 1.00148 1.19391 1.05225 0.92234 0.95806 1.18147 0.77179 0.84511 0.84574 1.90796 1.44337 1.86131 1.20066 1.45562 1.64329 1.05283 1.20966 1.21872 0.98617 0.80694 0.97237 0.87255 1.23634 0.98285 1.00726 0.95467 1.21563 0.96444 0.92264 0.99143 0.87807 1.19804 0.99147 0.97218 0.95365 1.17141 0.97102 0.85990 0.88378 1.91529 1.90399 1.64558 1.64194 1.21082 1.05292 0.92249 1.02331 1.17338 0.96333 0.79636 0.95939 1.91559 1.86419 1.37024 1.95864 1.21255 0.99307 0.98260 0.98977 1.20779 0.98048 0.91118 0.97855 1.23452 0.94701 0.99339 0.99802 1.20683 1.00624 0.97341 0.94673 1.20208 0.98689 0.90488 0.99715 1.19176 1.00928 0.93080 0.93605 0.77578 0.87140 1.18090 1.17878 0.80420 0.73985 0.84579 0.76171 0.90322 0.88414 0.83316 0.83764 0.83663 0.88062 0.90175 0.85685 0.85201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.00 12.88 -35.23 -0.45 -0.46 16 2 C -0.03 0.02 3.06 36.00 0.11 0.13 16 3 Si 0.68 -1.43 30.75 -169.99 -5.23 -6.66 16 4 C -0.21 0.04 5.57 -102.74 -0.57 -0.53 16 5 C 0.08 -0.18 10.43 -16.78 -0.17 -0.35 16 6 N -0.58 0.96 6.07 -10.68 -0.06 0.90 16 7 C 0.08 0.09 7.26 -84.00 -0.61 -0.52 16 8 C -0.06 -0.10 9.61 -39.03 -0.37 -0.47 16 9 C -0.12 -0.21 5.87 -104.95 -0.62 -0.82 16 10 C 0.57 1.41 7.76 -12.45 -0.10 1.31 16 11 O -0.54 -3.15 15.91 5.28 0.08 -3.06 16 12 N -0.71 0.31 5.21 -53.90 -0.28 0.03 16 13 C 0.12 -0.12 4.34 -66.97 -0.29 -0.41 16 14 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 15 C -0.14 0.24 7.26 -25.78 -0.19 0.05 16 16 C -0.08 0.14 3.78 -90.96 -0.34 -0.20 16 17 H 0.10 -0.18 7.44 -51.93 -0.39 -0.56 16 18 C -0.11 0.09 5.30 -104.55 -0.55 -0.46 16 19 C 0.13 0.08 7.24 -39.43 -0.29 -0.20 16 20 F -0.13 -0.19 16.36 2.25 0.04 -0.15 16 21 C -0.19 -0.10 10.01 -39.45 -0.39 -0.50 16 22 C 0.13 0.09 7.30 -39.43 -0.29 -0.20 16 23 F -0.13 -0.26 17.27 2.25 0.04 -0.22 16 24 C -0.16 0.16 10.03 -39.51 -0.40 -0.24 16 25 C -0.06 0.11 8.59 -39.60 -0.34 -0.23 16 26 C -0.13 0.34 7.28 -25.92 -0.19 0.15 16 27 C -0.11 -0.02 9.46 -39.57 -0.37 -0.40 16 28 C -0.07 -0.07 10.03 -39.69 -0.40 -0.47 16 29 C -0.06 -0.10 6.35 -105.05 -0.67 -0.77 16 30 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 31 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 32 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 33 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 34 H 0.18 -1.06 6.35 -52.48 -0.33 -1.40 16 35 H 0.42 -1.86 8.96 -40.82 -0.37 -2.22 16 36 H 0.14 0.21 7.62 -52.48 -0.40 -0.19 16 37 H 0.40 -1.03 6.69 -40.82 -0.27 -1.30 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.10 -0.26 6.32 -51.93 -0.33 -0.59 16 40 H 0.15 -0.07 8.06 -52.49 -0.42 -0.49 16 41 H 0.14 -0.38 8.06 -52.49 -0.42 -0.80 16 42 H 0.15 -0.58 6.67 -52.48 -0.35 -0.93 16 43 H 0.10 -0.33 7.71 -51.93 -0.40 -0.73 16 44 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 45 H 0.13 -0.31 6.36 -52.49 -0.33 -0.64 16 46 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 393.91 15.07 5.94 5.94 Total: 0.00 -9.88 393.91 -11.86 -21.74 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -4.89 Total: -12.91 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -7.04 Total: -5.15 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.35 Total: 0.93 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.37 Total: -3.52 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.08 Total: -0.38 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.23 Total: -6.66 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.88 -11.86 -21.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.170 kcal (2) G-P(sol) polarization free energy of solvation -9.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds