Wall clock time and date at job start Sun Mar 7 2021 00:05:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46948 * 2 1 4 4 C 1.50690 * 109.47339 * 239.99734 * 2 1 3 5 5 C 1.38405 * 119.82861 * 299.99923 * 4 2 1 6 6 C 1.37893 * 120.17059 * 180.02562 * 5 4 2 7 7 C 1.39834 * 119.82506 * 359.97438 * 6 5 4 8 8 C 1.47210 * 120.16945 * 179.97438 * 7 6 5 9 9 C 1.34804 * 120.00321 * 179.97438 * 8 7 6 10 10 C 1.46429 * 120.00230 * 179.97438 * 9 8 7 11 11 O 1.21696 * 120.00132 * 0.02562 * 10 9 8 12 12 N 1.34772 * 119.99936 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99927 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84945 * 23.80814 * 13 12 10 15 15 C 1.53784 * 113.61255 * 154.99869 * 13 12 10 16 16 C 1.53784 * 87.07956 * 89.20578 * 15 13 12 17 17 H 1.09006 * 113.61484 * 270.80081 * 16 15 13 18 18 C 1.50693 * 113.61894 * 139.97987 * 16 15 13 19 19 C 1.38454 * 119.99161 * 119.99890 * 18 16 15 20 20 F 1.35104 * 120.00837 * 0.02562 * 19 18 16 21 21 C 1.38438 * 119.97743 * 179.75127 * 19 18 16 22 22 C 1.38397 * 119.94948 * 0.24807 * 21 19 18 23 23 F 1.35103 * 120.01233 * 179.97438 * 22 21 19 24 24 C 1.38497 * 119.97392 * 0.02562 * 22 21 19 25 25 C 1.38183 * 120.02804 * 0.02562 * 24 22 21 26 26 C 1.53777 * 113.69235 * 252.53548 * 13 12 10 27 27 C 1.39836 * 119.66424 * 0.25313 * 7 6 5 28 28 C 1.37894 * 119.82400 * 359.49300 * 27 7 6 29 29 H 0.96693 * 113.99783 * 60.00163 * 1 2 3 30 30 H 1.09004 * 109.47131 * 119.99745 * 2 1 3 31 31 H 1.48500 * 110.00414 * 59.99950 * 3 2 1 32 32 H 1.48506 * 110.00170 * 181.31632 * 3 2 1 33 33 H 1.07996 * 119.91404 * 0.02562 * 5 4 2 34 34 H 1.07997 * 120.08697 * 179.97438 * 6 5 4 35 35 H 1.08004 * 120.00160 * 359.97438 * 8 7 6 36 36 H 1.08001 * 120.00242 * 0.02562 * 9 8 7 37 37 H 0.97000 * 120.00470 * 0.02562 * 12 10 9 38 38 H 1.08997 * 113.61929 * 334.66044 * 15 13 12 39 39 H 1.08999 * 113.69102 * 203.76231 * 15 13 12 40 40 H 1.07995 * 120.02326 * 180.23077 * 21 19 18 41 41 H 1.08004 * 119.98764 * 179.97438 * 24 22 21 42 42 H 1.07996 * 119.97471 * 179.97438 * 25 24 22 43 43 H 1.09001 * 113.61183 * 156.32137 * 26 13 12 44 44 H 1.09001 * 113.61570 * 25.42630 * 26 13 12 45 45 H 1.07994 * 120.08765 * 179.72475 * 27 7 6 46 46 H 1.07995 * 119.91423 * 180.25551 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 1.5949 -2.0355 -1.4458 6 6 2.0511 -2.6926 -2.5690 7 6 2.8553 -2.0164 -3.4917 8 6 3.3470 -2.7107 -4.6931 9 6 4.1216 -2.0555 -5.5807 10 6 4.6111 -2.7462 -6.7754 11 8 4.3184 -3.9118 -6.9673 12 7 5.3860 -2.0913 -7.6625 13 6 5.8753 -2.7822 -8.8581 14 1 5.2528 -3.6311 -9.1410 15 6 6.1963 -1.8369 -10.0279 16 6 7.6162 -1.7281 -9.4473 17 1 7.7299 -0.9248 -8.7193 18 6 8.6986 -1.7252 -10.4957 19 6 9.5550 -0.6426 -10.6033 20 9 9.4206 0.4109 -9.7682 21 6 10.5525 -0.6425 -11.5632 22 6 10.6893 -1.7225 -12.4177 23 9 11.6621 -1.7235 -13.3552 24 6 9.8280 -2.8019 -12.3119 25 6 8.8320 -2.8005 -11.3541 26 6 7.3774 -3.1081 -8.8122 27 6 3.1948 -0.6791 -3.2646 28 6 2.7265 -0.0342 -2.1393 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5138 0.8900 31 1 1.5615 2.4680 1.2085 32 1 3.5346 1.7704 -0.0321 33 1 0.9734 -2.5562 -0.7324 34 1 1.7881 -3.7267 -2.7355 35 1 3.0872 -3.7451 -4.8634 36 1 4.3818 -1.0212 -5.4103 37 1 5.6197 -1.1624 -7.5095 38 1 5.6395 -0.9004 -9.9980 39 1 6.1597 -2.3201 -11.0042 40 1 11.2233 0.2000 -11.6454 41 1 9.9343 -3.6447 -12.9789 42 1 8.1605 -3.6425 -11.2727 43 1 7.6635 -3.9402 -9.4555 44 1 7.7740 -3.1980 -7.8008 45 1 3.8191 -0.1516 -3.9705 46 1 2.9844 0.9998 -1.9646 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:05:59 Heat of formation + Delta-G solvation = -59.383105 kcal Electronic energy + Delta-G solvation = -30872.701427 eV Core-core repulsion = 26137.895298 eV Total energy + Delta-G solvation = -4734.806129 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.132 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.06639 -50.00942 -41.63161 -40.77000 -40.17493 -38.78174 -37.82279 -35.09736 -34.56055 -32.33210 -31.99953 -31.68582 -31.09849 -27.44620 -26.90539 -26.22734 -24.60496 -24.18495 -23.87590 -22.88634 -22.14686 -20.61579 -20.26554 -19.35925 -18.93606 -18.32185 -18.14373 -17.38083 -17.27018 -17.04427 -16.88911 -16.68557 -16.47463 -16.34095 -16.25211 -15.92241 -15.81884 -15.52573 -15.32659 -15.30948 -15.11884 -14.70510 -14.65940 -14.20836 -14.08096 -13.92996 -13.83077 -13.65012 -13.56590 -13.34659 -13.05524 -12.90506 -12.65733 -12.30589 -12.18918 -12.06701 -11.85209 -11.77926 -11.45062 -11.38878 -10.97501 -10.51019 -10.20748 -10.12037 -10.08463 -9.65825 -9.32041 -5.11154 -0.61250 -0.19061 -0.11606 0.29160 0.85359 1.21392 1.55716 1.90673 2.06300 2.18790 2.23866 2.73809 2.77084 3.18660 3.34693 3.35511 3.38352 3.46658 3.51609 3.54321 3.57615 3.70940 3.73727 3.79662 3.79938 3.93122 4.06163 4.07153 4.11758 4.23658 4.35495 4.43273 4.47505 4.53120 4.61826 4.68081 4.71759 4.74216 4.77535 4.82469 4.86502 4.87097 4.94674 4.95847 5.01076 5.06019 5.16073 5.29503 5.38856 5.50529 5.52917 5.64437 5.79660 6.44369 6.48850 7.19815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.107 4.107 5 C -0.095 4.095 6 C -0.091 4.091 7 C -0.074 4.074 8 C -0.013 4.013 9 C -0.216 4.216 10 C 0.552 3.448 11 O -0.541 6.541 12 N -0.710 5.710 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.135 4.135 16 C -0.075 4.075 17 H 0.104 0.896 18 C -0.115 4.115 19 C 0.133 3.867 20 F -0.129 7.129 21 C -0.190 4.190 22 C 0.127 3.873 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.143 4.143 27 C -0.095 4.095 28 C -0.120 4.120 29 H 0.380 0.620 30 H 0.115 0.885 31 H -0.254 1.254 32 H -0.258 1.258 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.138 0.862 36 H 0.131 0.869 37 H 0.403 0.597 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.149 0.851 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.097 0.903 44 H 0.077 0.923 45 H 0.132 0.868 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.055 2.553 -1.637 3.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.591 3.409 4 C -0.108 4.108 5 C -0.113 4.113 6 C -0.109 4.109 7 C -0.074 4.074 8 C -0.033 4.033 9 C -0.237 4.237 10 C 0.341 3.659 11 O -0.419 6.419 12 N -0.361 5.361 13 C 0.015 3.985 14 H 0.126 0.874 15 C -0.173 4.173 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.116 4.116 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.209 4.209 22 C 0.108 3.892 23 F -0.108 7.108 24 C -0.178 4.178 25 C -0.078 4.078 26 C -0.181 4.181 27 C -0.113 4.113 28 C -0.137 4.137 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.179 1.179 32 H -0.183 1.183 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.156 0.844 36 H 0.149 0.851 37 H 0.237 0.763 38 H 0.098 0.902 39 H 0.119 0.881 40 H 0.167 0.833 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.116 0.884 44 H 0.096 0.904 45 H 0.150 0.850 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.656 2.054 -0.804 2.301 hybrid contribution 0.661 0.188 0.131 0.699 sum 0.005 2.242 -0.673 2.341 Atomic orbital electron populations 1.86515 1.16927 1.81691 1.49288 1.25103 0.85388 1.10211 0.97495 0.94718 0.80940 0.77926 0.87315 1.20534 0.98255 0.95230 0.96744 1.20996 0.99032 0.93795 0.97463 1.21469 0.96007 1.00091 0.93380 1.19066 0.99283 0.93987 0.95085 1.22417 0.91052 0.99610 0.90191 1.22867 1.03675 1.01165 0.95953 1.18334 0.77871 0.86442 0.83231 1.90840 1.57948 1.16580 1.76536 1.45549 1.52150 1.15489 1.22896 1.21812 0.95200 0.96495 0.84979 0.87363 1.23447 0.94656 1.00679 0.98482 1.21563 0.92296 0.99689 0.95820 0.87827 1.19808 0.98142 0.93987 0.99636 1.17140 0.96120 0.85050 0.90333 1.91528 1.95133 1.54751 1.69309 1.21079 1.01425 1.00787 0.97656 1.17341 0.88187 0.95066 0.88632 1.91561 1.60234 1.96618 1.62434 1.21260 0.96316 0.98797 1.01403 1.20780 0.96825 0.97538 0.92657 1.23584 0.96098 0.96254 1.02182 1.21357 0.98933 0.93778 0.97205 1.20960 0.98561 0.99577 0.94618 0.77290 0.86732 1.17889 1.18264 0.85130 0.85033 0.84426 0.85135 0.76258 0.90180 0.88105 0.83312 0.83744 0.83666 0.88449 0.90396 0.85046 0.85261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.18 12.76 -35.23 -0.45 -0.27 16 2 C -0.07 0.06 2.82 36.00 0.10 0.16 16 3 Si 0.69 -1.16 29.77 -169.99 -5.06 -6.22 16 4 C -0.11 0.07 5.40 -104.50 -0.56 -0.50 16 5 C -0.09 0.02 9.59 -39.65 -0.38 -0.36 16 6 C -0.09 0.04 9.80 -39.11 -0.38 -0.35 16 7 C -0.07 0.03 5.87 -105.06 -0.62 -0.59 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.19 9.41 -37.50 -0.35 -0.16 16 10 C 0.55 0.64 7.74 -12.97 -0.10 0.54 16 11 O -0.54 -2.80 15.83 5.19 0.08 -2.72 16 12 N -0.71 1.08 5.26 -54.40 -0.29 0.79 16 13 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 14 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 15 C -0.13 0.40 7.29 -25.92 -0.19 0.21 16 16 C -0.08 0.17 3.78 -90.96 -0.34 -0.17 16 17 H 0.10 -0.23 7.44 -51.93 -0.39 -0.62 16 18 C -0.11 0.13 5.30 -104.55 -0.55 -0.42 16 19 C 0.13 0.03 7.24 -39.43 -0.29 -0.25 16 20 F -0.13 -0.14 16.36 2.25 0.04 -0.10 16 21 C -0.19 -0.05 10.01 -39.45 -0.39 -0.44 16 22 C 0.13 0.05 7.30 -39.43 -0.29 -0.23 16 23 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 24 C -0.16 0.19 10.02 -39.51 -0.40 -0.20 16 25 C -0.06 0.13 8.59 -39.60 -0.34 -0.21 16 26 C -0.14 0.29 7.26 -25.92 -0.19 0.11 16 27 C -0.09 0.13 9.41 -39.11 -0.37 -0.24 16 28 C -0.12 0.17 8.65 -39.65 -0.34 -0.17 16 29 H 0.38 -1.58 8.70 45.56 0.40 -1.18 16 30 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 32 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 33 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.13 -0.23 8.06 -52.49 -0.42 -0.66 16 35 H 0.14 0.06 7.52 -52.48 -0.39 -0.33 16 36 H 0.13 -0.48 6.07 -52.49 -0.32 -0.80 16 37 H 0.40 -1.61 8.68 -40.82 -0.35 -1.97 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.10 -0.36 7.71 -51.93 -0.40 -0.76 16 40 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 41 H 0.14 -0.41 8.06 -52.48 -0.42 -0.84 16 42 H 0.15 -0.62 6.67 -52.49 -0.35 -0.97 16 43 H 0.10 -0.29 6.32 -51.93 -0.33 -0.61 16 44 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.13 -0.47 6.17 -52.49 -0.32 -0.80 16 46 H 0.13 -0.41 4.85 -52.49 -0.25 -0.67 16 LS Contribution 394.81 15.07 5.95 5.95 Total: 0.00 -8.34 394.81 -11.57 -19.91 By element: Atomic # 1 Polarization: -7.81 SS G_CDS: -5.25 Total: -13.06 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -6.63 Total: -4.10 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.29 Total: 0.79 kcal Atomic # 8 Polarization: -2.62 SS G_CDS: -0.37 Total: -2.99 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.08 Total: -0.29 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.06 Total: -6.22 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -8.34 -11.57 -19.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.474 kcal (2) G-P(sol) polarization free energy of solvation -8.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.383 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds