Wall clock time and date at job start Sun Mar 7 2021 00:06:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86299 * 109.47397 * 2 1 4 4 C 1.50704 * 109.46992 * 120.00514 * 2 1 3 5 5 C 1.38192 * 119.83668 * 254.97042 * 4 2 1 6 6 C 1.38320 * 120.14002 * 179.76318 * 5 4 2 7 7 F 1.35102 * 120.08273 * 180.25714 * 6 5 4 8 8 C 1.39801 * 119.83118 * 0.51787 * 6 5 4 9 9 C 1.47696 * 120.15398 * 179.76840 * 8 6 5 10 10 O 1.21573 * 119.99881 * 359.71697 * 9 8 6 11 11 N 1.34773 * 120.00155 * 179.97438 * 9 8 6 12 12 C 1.46500 * 120.00431 * 179.72294 * 11 9 8 13 13 H 1.09007 * 112.84556 * 334.66988 * 12 11 9 14 14 C 1.53775 * 113.61643 * 105.86472 * 12 11 9 15 15 C 1.54054 * 86.98523 * 89.16477 * 14 12 11 16 16 H 1.08999 * 113.61002 * 270.88089 * 15 14 12 17 17 C 1.50697 * 113.69309 * 139.99264 * 15 14 12 18 18 C 1.38187 * 119.98714 * 322.46479 * 17 15 14 19 19 C 1.38230 * 120.04995 * 179.97438 * 18 17 15 20 20 C 1.38461 * 120.02612 * 0.02562 * 19 18 17 21 21 F 1.35096 * 120.01076 * 179.97438 * 20 19 18 22 22 C 1.38441 * 119.97114 * 0.02562 * 20 19 18 23 23 C 1.38396 * 119.94961 * 359.71731 * 22 20 19 24 24 F 1.35107 * 120.01191 * 180.27552 * 23 22 20 25 25 C 1.53778 * 113.61592 * 203.47769 * 12 11 9 26 26 C 1.39660 * 119.69255 * 359.48483 * 8 6 5 27 27 C 1.38065 * 119.84839 * 0.25764 * 26 8 6 28 28 F 1.35099 * 119.91626 * 180.02562 * 27 26 8 29 29 H 0.96707 * 114.00115 * 300.00341 * 1 2 3 30 30 H 1.09004 * 109.46860 * 239.99719 * 2 1 3 31 31 H 1.48498 * 110.00069 * 299.99914 * 3 2 1 32 32 H 1.48498 * 109.99946 * 61.32509 * 3 2 1 33 33 H 1.07996 * 119.92635 * 0.02562 * 5 4 2 34 34 H 0.97000 * 120.00112 * 359.72731 * 11 9 8 35 35 H 1.09005 * 113.61587 * 203.66936 * 14 12 11 36 36 H 1.09001 * 113.61321 * 334.56927 * 14 12 11 37 37 H 1.07997 * 119.97607 * 359.97438 * 18 17 15 38 38 H 1.08001 * 119.99070 * 180.02562 * 19 18 17 39 39 H 1.07997 * 120.02329 * 180.02562 * 22 20 19 40 40 H 1.08994 * 113.62154 * 25.42750 * 25 12 11 41 41 H 1.09004 * 113.61506 * 156.33462 * 25 12 11 42 42 H 1.07997 * 120.07188 * 180.27715 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 2.4535 0.0197 2.2810 6 6 2.9118 -0.6257 3.4153 7 9 3.4174 0.0897 4.4439 8 6 2.8556 -2.0204 3.4925 9 6 3.3477 -2.7172 4.6982 10 8 3.8077 -2.0780 5.6244 11 7 3.2916 -4.0619 4.7696 12 6 3.7853 -4.7534 5.9630 13 1 4.5392 -4.1803 6.5027 14 6 2.6665 -5.3020 6.8642 15 6 2.7335 -6.5916 6.0241 16 1 2.0785 -6.5796 5.1530 17 6 2.6008 -7.8524 6.8387 18 6 3.1819 -7.9307 8.0900 19 6 3.0606 -9.0865 8.8385 20 6 2.3569 -10.1674 8.3349 21 9 2.2389 -11.2970 9.0665 22 6 1.7752 -10.0904 7.0810 23 6 1.8929 -8.9309 6.3347 24 9 1.3210 -8.8524 5.1132 25 6 4.1898 -6.2145 5.7052 26 6 2.3264 -2.7515 2.4267 27 6 1.8677 -2.0937 1.3028 28 9 1.3551 -2.7995 0.2712 29 1 -0.3934 0.4418 0.7651 30 1 1.7922 -0.5139 -0.8900 31 1 1.5616 2.4679 -1.2085 32 1 1.5881 2.4585 1.2243 33 1 2.5000 1.0968 2.2180 34 1 2.9243 -4.5719 4.0307 35 1 2.9701 -5.4405 7.9019 36 1 1.7237 -4.7638 6.7663 37 1 3.7313 -7.0882 8.4834 38 1 3.5148 -9.1464 9.8165 39 1 1.2258 -10.9329 6.6875 40 1 4.4760 -6.4127 4.6724 41 1 4.9092 -6.6021 6.4266 42 1 2.2759 -3.8289 2.4816 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:03 Heat of formation + Delta-G solvation = -153.915118 kcal Electronic energy + Delta-G solvation = -33866.776646 eV Core-core repulsion = 28472.727110 eV Total energy + Delta-G solvation = -5394.049536 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.098 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.12525 -50.08614 -50.02628 -50.02548 -41.85228 -40.84226 -39.90383 -38.78097 -37.81358 -34.93452 -33.32729 -31.98233 -31.49473 -31.44723 -28.06365 -26.97142 -26.30960 -24.55395 -24.50108 -23.92257 -22.93725 -22.08311 -20.50498 -19.84659 -19.35478 -18.89403 -18.60522 -18.29514 -18.00360 -17.51197 -17.36125 -17.06259 -16.96669 -16.86392 -16.63204 -16.56426 -16.35695 -16.31886 -16.01654 -15.90034 -15.70282 -15.57599 -15.49185 -15.32383 -15.08695 -14.59237 -14.21680 -14.15358 -13.93630 -13.81119 -13.70414 -13.60292 -13.25272 -13.06559 -12.90813 -12.68316 -12.48076 -12.24529 -11.98339 -11.91912 -11.50853 -11.19519 -10.88749 -10.68553 -10.30312 -10.18899 -9.86601 -9.68329 -5.14387 -0.88268 -0.39570 -0.21316 -0.13545 1.00019 1.34579 1.39357 1.72492 1.78408 2.16518 2.19963 2.71566 2.75035 2.76442 2.99290 3.08024 3.12830 3.30128 3.31374 3.34974 3.39611 3.46510 3.50318 3.64683 3.66970 3.76445 3.88480 4.00139 4.04393 4.22813 4.26106 4.38639 4.43424 4.48110 4.57444 4.58375 4.62533 4.65478 4.68223 4.72937 4.79240 4.81336 4.88810 4.93406 5.09809 5.30044 5.36428 5.62365 6.15972 6.18084 6.93437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.080 4.080 3 Si 0.696 3.304 4 C -0.097 4.097 5 C -0.139 4.139 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.141 4.141 9 C 0.564 3.436 10 O -0.510 6.510 11 N -0.707 5.707 12 C 0.121 3.879 13 H 0.111 0.889 14 C -0.142 4.142 15 C -0.076 4.076 16 H 0.103 0.897 17 C -0.115 4.115 18 C -0.060 4.060 19 C -0.159 4.159 20 C 0.128 3.872 21 F -0.130 7.130 22 C -0.190 4.190 23 C 0.133 3.867 24 F -0.129 7.129 25 C -0.134 4.134 26 C -0.094 4.094 27 C 0.112 3.888 28 F -0.120 7.120 29 H 0.378 0.622 30 H 0.128 0.872 31 H -0.248 1.248 32 H -0.254 1.254 33 H 0.159 0.841 34 H 0.401 0.599 35 H 0.099 0.901 36 H 0.078 0.922 37 H 0.146 0.854 38 H 0.145 0.855 39 H 0.149 0.851 40 H 0.081 0.919 41 H 0.103 0.897 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.339 -0.170 -0.922 2.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.098 4.098 5 C -0.158 4.158 6 C 0.140 3.860 7 F -0.082 7.082 8 C -0.146 4.146 9 C 0.350 3.650 10 O -0.385 6.385 11 N -0.360 5.360 12 C 0.016 3.984 13 H 0.129 0.871 14 C -0.181 4.181 15 C -0.094 4.094 16 H 0.122 0.878 17 C -0.116 4.116 18 C -0.078 4.078 19 C -0.178 4.178 20 C 0.108 3.892 21 F -0.108 7.108 22 C -0.209 4.209 23 C 0.114 3.886 24 F -0.107 7.107 25 C -0.172 4.172 26 C -0.113 4.113 27 C 0.092 3.908 28 F -0.098 7.098 29 H 0.226 0.774 30 H 0.145 0.855 31 H -0.173 1.173 32 H -0.179 1.179 33 H 0.176 0.824 34 H 0.237 0.763 35 H 0.118 0.882 36 H 0.097 0.903 37 H 0.163 0.837 38 H 0.163 0.837 39 H 0.167 0.833 40 H 0.099 0.901 41 H 0.122 0.878 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.526 0.777 -0.817 2.766 hybrid contribution -1.544 -0.991 0.058 1.835 sum 0.982 -0.214 -0.758 1.259 Atomic orbital electron populations 1.86693 1.16676 1.79932 1.49265 1.25118 0.84704 1.11773 0.97318 0.94741 0.91318 0.73408 0.80927 1.20436 0.99295 0.92620 0.97480 1.21080 1.00944 1.01835 0.91909 1.17482 0.95242 0.87925 0.85368 1.91659 1.83500 1.77102 1.55937 1.19846 1.05752 0.92540 0.96426 1.17806 0.78839 0.82234 0.86130 1.90898 1.43974 1.65672 1.37984 1.45539 1.64116 1.06068 1.20228 1.21874 0.97154 0.92932 0.86462 0.87071 1.23639 1.00244 0.94937 0.99252 1.21618 0.98418 0.90896 0.98512 0.87847 1.19777 1.00188 0.95238 0.96438 1.20775 0.97251 0.97487 0.92256 1.21265 1.01590 0.92690 1.02237 1.17345 0.98701 0.83412 0.89698 1.91561 1.94150 1.48827 1.76280 1.21085 1.05382 0.99542 0.94934 1.17142 0.95937 0.94083 0.81437 1.91532 1.82375 1.96515 1.40287 1.23445 0.95882 0.94170 1.03654 1.21181 0.97695 1.01093 0.91355 1.17212 0.98829 0.88842 0.85907 1.91589 1.84165 1.78011 1.56065 0.77394 0.85469 1.17273 1.17875 0.82402 0.76262 0.88233 0.90287 0.83651 0.83723 0.83291 0.90072 0.87848 0.83112 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.02 12.88 -35.23 -0.45 -0.44 16 2 C -0.08 0.13 2.44 36.01 0.09 0.22 16 3 Si 0.70 -1.80 30.23 -169.99 -5.14 -6.94 16 4 C -0.10 0.14 5.27 -104.48 -0.55 -0.41 16 5 C -0.14 0.20 8.62 -39.57 -0.34 -0.14 16 6 C 0.16 0.09 7.28 -38.97 -0.28 -0.19 16 7 F -0.10 -0.32 15.55 2.25 0.04 -0.28 16 8 C -0.14 0.03 5.88 -104.92 -0.62 -0.59 16 9 C 0.56 0.61 7.77 -12.40 -0.10 0.51 16 10 O -0.51 -2.54 14.96 5.30 0.08 -2.46 16 11 N -0.71 1.39 5.21 -54.01 -0.28 1.11 16 12 C 0.12 -0.27 4.29 -67.12 -0.29 -0.56 16 13 H 0.11 -0.10 7.50 -51.93 -0.39 -0.49 16 14 C -0.14 0.37 7.27 -25.78 -0.19 0.18 16 15 C -0.08 0.21 3.79 -90.82 -0.34 -0.13 16 16 H 0.10 -0.28 7.44 -51.93 -0.39 -0.67 16 17 C -0.12 0.17 5.30 -104.55 -0.55 -0.38 16 18 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 19 C -0.16 0.23 10.03 -39.50 -0.40 -0.16 16 20 C 0.13 0.03 7.30 -39.42 -0.29 -0.26 16 21 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 22 C -0.19 -0.02 10.01 -39.45 -0.39 -0.41 16 23 C 0.13 0.00 7.24 -39.43 -0.29 -0.28 16 24 F -0.13 -0.12 16.36 2.25 0.04 -0.08 16 25 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 26 C -0.09 0.19 9.52 -39.11 -0.37 -0.18 16 27 C 0.11 -0.10 7.23 -39.49 -0.29 -0.38 16 28 F -0.12 -0.08 16.73 2.25 0.04 -0.04 16 29 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 30 H 0.13 -0.27 7.89 -51.93 -0.41 -0.68 16 31 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 32 H -0.25 0.29 6.68 56.52 0.38 0.67 16 33 H 0.16 -0.46 4.83 -52.49 -0.25 -0.71 16 34 H 0.40 -1.76 6.74 -40.82 -0.27 -2.03 16 35 H 0.10 -0.35 6.33 -51.93 -0.33 -0.68 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.15 -0.68 6.66 -52.49 -0.35 -1.03 16 38 H 0.14 -0.44 8.06 -52.49 -0.42 -0.87 16 39 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 40 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 41 H 0.10 -0.44 7.72 -51.93 -0.40 -0.84 16 42 H 0.15 -0.72 6.40 -52.49 -0.34 -1.05 16 LS Contribution 370.73 15.07 5.59 5.59 Total: 0.00 -8.16 370.73 -9.43 -17.59 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -3.65 Total: -10.80 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -5.73 Total: -3.07 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -0.28 Total: 1.11 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.37 Total: -2.90 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.15 Total: -0.57 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.14 Total: -6.94 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -8.16 -9.43 -17.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.324 kcal (2) G-P(sol) polarization free energy of solvation -8.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.915 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds