Wall clock time and date at job start Sun Mar 7 2021 00:06:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35646 * 117.00368 * 2 1 4 4 C 1.40137 * 120.15081 * 179.97438 * 3 2 1 5 5 C 1.47531 * 120.19350 * 0.02562 * 4 3 2 6 6 O 1.21592 * 119.99882 * 359.71461 * 5 4 3 7 7 N 1.34772 * 120.00267 * 179.72208 * 5 4 3 8 8 C 1.46506 * 120.00397 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.84461 * 23.79837 * 8 7 5 10 10 C 1.53779 * 113.61723 * 154.99732 * 8 7 5 11 11 C 1.53779 * 87.08207 * 89.11776 * 10 8 7 12 12 H 1.09005 * 113.61282 * 270.80526 * 11 10 8 13 13 C 1.50696 * 113.61824 * 139.98071 * 11 10 8 14 14 C 1.38455 * 119.98931 * 119.99806 * 13 11 10 15 15 F 1.35106 * 120.00981 * 359.74617 * 14 13 11 16 16 C 1.38433 * 119.97403 * 179.72578 * 14 13 11 17 17 C 1.38400 * 119.95186 * 359.97438 * 16 14 13 18 18 F 1.35099 * 120.01226 * 179.97438 * 17 16 14 19 19 C 1.38488 * 119.97496 * 0.02562 * 17 16 14 20 20 C 1.38186 * 120.02591 * 359.97438 * 19 17 16 21 21 C 1.53780 * 87.08115 * 25.43214 * 11 10 8 22 22 C 1.39715 * 119.61704 * 179.72359 * 4 3 2 23 23 C 1.37786 * 119.90410 * 0.25754 * 22 4 3 24 24 C 1.50709 * 119.84608 * 180.02562 * 23 22 4 25 25 O 1.42899 * 109.47123 * 64.99893 * 24 23 22 26 26 Si 1.86300 * 109.46841 * 184.99918 * 24 23 22 27 27 C 1.38545 * 120.30558 * 359.97385 * 23 22 4 28 28 C 1.38051 * 120.38773 * 0.02562 * 27 23 22 29 29 H 1.09008 * 109.47180 * 300.00033 * 1 2 3 30 30 H 1.09007 * 109.47195 * 59.99699 * 1 2 3 31 31 H 1.09002 * 109.47663 * 179.97438 * 1 2 3 32 32 H 0.97002 * 120.00037 * 359.97438 * 7 5 4 33 33 H 1.09005 * 113.61292 * 334.56899 * 10 8 7 34 34 H 1.08998 * 113.61566 * 203.66485 * 10 8 7 35 35 H 1.08003 * 120.02381 * 180.02562 * 16 14 13 36 36 H 1.07999 * 119.98822 * 179.97438 * 19 17 16 37 37 H 1.08003 * 119.97619 * 180.02562 * 20 19 17 38 38 H 1.08996 * 113.61674 * 89.11528 * 21 11 10 39 39 H 1.09001 * 113.61304 * 220.02340 * 21 11 10 40 40 H 1.08001 * 120.04534 * 180.27462 * 22 4 3 41 41 H 1.08993 * 109.46807 * 304.99618 * 24 23 22 42 42 H 0.96699 * 113.99970 * 60.00366 * 25 24 23 43 43 H 1.48500 * 109.99889 * 180.02562 * 26 24 23 44 44 H 1.48504 * 109.99952 * 301.31657 * 26 24 23 45 45 H 1.08001 * 119.80622 * 180.02562 * 27 23 22 46 46 H 1.08006 * 119.96155 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2855 0.0005 5 6 4.2549 0.0530 0.0005 6 8 3.7093 -1.0336 0.0053 7 7 5.6003 0.1315 -0.0046 8 6 6.4056 -1.0924 -0.0040 9 1 5.8689 -1.9523 -0.4049 10 6 7.8088 -0.9070 -0.6052 11 6 8.2799 -0.5329 0.8100 12 1 8.1945 0.5310 1.0317 13 6 9.6307 -1.0982 1.1658 14 6 10.6730 -0.2473 1.4921 15 9 10.4805 1.0900 1.4865 16 6 11.9122 -0.7672 1.8244 17 6 12.1076 -2.1373 1.8307 18 9 13.3166 -2.6460 2.1543 19 6 11.0636 -2.9866 1.5040 20 6 9.8271 -2.4666 1.1724 21 6 7.1031 -1.3703 1.3380 22 6 4.0668 2.5362 -0.0053 23 6 3.3038 3.6835 -0.0062 24 6 3.9769 5.0319 -0.0131 25 8 4.6946 5.1998 -1.2374 26 14 2.6893 6.3695 0.1404 27 6 1.9207 3.6033 -0.0019 28 6 1.2925 2.3740 0.0039 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 6.0356 0.9984 -0.0087 33 1 7.8731 -0.0851 -1.3183 34 1 8.2481 -1.8307 -0.9817 35 1 12.7257 -0.1041 2.0795 36 1 11.2160 -4.0558 1.5083 37 1 9.0133 -3.1297 0.9181 38 1 7.3495 -2.4207 1.4928 39 1 6.5978 -0.9224 2.1937 40 1 5.1447 2.6035 -0.0094 41 1 4.6696 5.0964 0.8259 42 1 4.1397 5.1538 -2.0280 43 1 3.3402 7.7042 0.1342 44 1 1.7200 6.2724 -0.9806 45 1 1.3305 4.5077 -0.0030 46 1 0.2138 2.3195 0.0069 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:08 Heat of formation + Delta-G solvation = -102.999153 kcal Electronic energy + Delta-G solvation = -33530.802484 eV Core-core repulsion = 28603.648970 eV Total energy + Delta-G solvation = -4927.153514 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.02128 -49.97707 -41.90584 -41.22428 -39.85330 -39.26227 -38.56409 -37.27172 -34.59118 -32.73140 -31.95872 -31.86834 -31.27791 -28.63234 -26.84652 -26.48873 -26.25171 -25.16410 -24.25645 -23.14869 -22.52005 -21.54924 -20.32918 -19.53491 -19.27256 -18.50131 -18.30665 -18.14615 -17.27388 -17.25422 -17.00578 -16.86559 -16.82150 -16.47372 -16.30154 -16.23859 -16.03411 -15.91317 -15.74459 -15.48782 -15.28550 -15.20883 -14.75230 -14.60065 -14.38599 -14.06889 -13.82483 -13.64398 -13.60738 -13.52871 -13.42065 -13.20516 -12.83411 -12.61455 -12.47804 -12.27392 -12.13118 -12.12197 -11.78318 -11.72233 -11.37719 -10.93345 -10.56675 -10.26046 -10.15444 -10.00479 -9.61650 -9.32054 -5.04753 -0.28201 -0.15048 -0.07734 0.16281 1.19368 1.49653 1.82908 1.89053 2.07139 2.19202 2.23334 2.68642 2.81004 3.23599 3.27245 3.39089 3.42575 3.47045 3.54849 3.57570 3.59485 3.62866 3.77816 3.84257 3.92719 3.97470 4.03896 4.10720 4.17427 4.17871 4.31208 4.47899 4.52687 4.54765 4.58363 4.60334 4.68105 4.73100 4.77410 4.81838 4.85778 4.86786 4.92464 4.99840 5.00332 5.06906 5.20496 5.21006 5.46513 5.57615 5.68337 6.25617 6.31674 6.52200 7.31287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.513 6.513 7 N -0.714 5.714 8 C 0.124 3.876 9 H 0.109 0.891 10 C -0.135 4.135 11 C -0.076 4.076 12 H 0.103 0.897 13 C -0.114 4.114 14 C 0.133 3.867 15 F -0.129 7.129 16 C -0.190 4.190 17 C 0.127 3.873 18 F -0.130 7.130 19 C -0.159 4.159 20 C -0.060 4.060 21 C -0.142 4.142 22 C -0.019 4.019 23 C -0.166 4.166 24 C -0.069 4.069 25 O -0.530 6.530 26 Si 0.684 3.316 27 C -0.048 4.048 28 C -0.214 4.214 29 H 0.059 0.941 30 H 0.058 0.942 31 H 0.105 0.895 32 H 0.399 0.601 33 H 0.079 0.921 34 H 0.101 0.899 35 H 0.149 0.851 36 H 0.145 0.855 37 H 0.146 0.854 38 H 0.097 0.903 39 H 0.078 0.922 40 H 0.135 0.865 41 H 0.119 0.881 42 H 0.376 0.624 43 H -0.256 1.256 44 H -0.260 1.260 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.461 1.313 0.682 3.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.179 4.179 5 C 0.353 3.647 6 O -0.388 6.388 7 N -0.367 5.367 8 C 0.018 3.982 9 H 0.127 0.873 10 C -0.173 4.173 11 C -0.094 4.094 12 H 0.121 0.879 13 C -0.115 4.115 14 C 0.114 3.886 15 F -0.107 7.107 16 C -0.210 4.210 17 C 0.107 3.893 18 F -0.109 7.109 19 C -0.178 4.178 20 C -0.078 4.078 21 C -0.181 4.181 22 C -0.038 4.038 23 C -0.167 4.167 24 C -0.179 4.179 25 O -0.336 6.336 26 Si 0.585 3.415 27 C -0.066 4.066 28 C -0.233 4.233 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.124 0.876 32 H 0.235 0.765 33 H 0.098 0.902 34 H 0.119 0.881 35 H 0.167 0.833 36 H 0.162 0.838 37 H 0.163 0.837 38 H 0.116 0.884 39 H 0.097 0.903 40 H 0.153 0.847 41 H 0.137 0.863 42 H 0.224 0.776 43 H -0.181 1.181 44 H -0.185 1.185 45 H 0.152 0.848 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.622 1.095 0.732 3.854 hybrid contribution 0.609 0.525 -0.979 1.267 sum -3.013 1.620 -0.247 3.430 Atomic orbital electron populations 1.23241 0.78152 1.04784 1.01466 1.86377 1.21227 1.25182 1.86138 1.19091 0.90922 0.85082 0.90404 1.19306 0.90880 0.93815 1.13911 1.17932 0.81708 0.88701 0.76375 1.90848 1.71426 1.28573 1.47999 1.45578 1.05767 1.09068 1.76301 1.21789 0.91021 0.88679 0.96703 0.87318 1.23453 0.94732 1.03419 0.95722 1.21565 0.89960 1.00536 0.97340 0.87855 1.19812 0.95202 0.93513 1.02973 1.17144 0.93374 0.77522 1.00598 1.91532 1.95522 1.29780 1.93857 1.21077 0.98211 0.94939 1.06729 1.17336 0.81323 0.91058 0.99552 1.91558 1.42009 1.87399 1.89910 1.21253 0.92461 1.00988 1.03092 1.20782 0.96742 0.93760 0.96516 1.23589 0.95319 1.00917 0.98278 1.20978 0.99853 0.89874 0.93077 1.20057 0.93533 0.95920 1.07182 1.24942 1.04135 0.99019 0.89815 1.86608 1.37424 1.94259 1.15311 0.95027 0.78768 0.77685 0.90016 1.21048 0.93800 0.97496 0.94245 1.21234 1.00753 0.91547 1.09725 0.92212 0.92364 0.87639 0.76506 0.90213 0.88095 0.83323 0.83766 0.83659 0.88448 0.90343 0.84744 0.86278 0.77588 1.18074 1.18487 0.84824 0.84132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.86 8.57 -40.52 -0.35 -1.21 16 3 C 0.19 0.37 6.70 -38.69 -0.26 0.11 16 4 C -0.18 -0.31 5.89 -104.84 -0.62 -0.93 16 5 C 0.57 1.74 7.76 -12.47 -0.10 1.64 16 6 O -0.51 -3.49 14.76 -16.59 -0.24 -3.73 16 7 N -0.71 0.04 5.21 -54.06 -0.28 -0.24 16 8 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 9 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 10 C -0.14 0.29 7.29 -25.92 -0.19 0.10 16 11 C -0.08 0.12 3.78 -90.96 -0.34 -0.22 16 12 H 0.10 -0.15 7.45 -51.93 -0.39 -0.53 16 13 C -0.11 0.07 5.29 -104.55 -0.55 -0.49 16 14 C 0.13 0.10 7.24 -39.43 -0.29 -0.18 16 15 F -0.13 -0.21 16.36 2.25 0.04 -0.18 16 16 C -0.19 -0.13 10.01 -39.45 -0.39 -0.52 16 17 C 0.13 0.10 7.30 -39.43 -0.29 -0.19 16 18 F -0.13 -0.27 17.27 2.25 0.04 -0.23 16 19 C -0.16 0.13 10.02 -39.51 -0.40 -0.26 16 20 C -0.06 0.10 8.62 -39.60 -0.34 -0.24 16 21 C -0.14 0.20 7.25 -25.92 -0.19 0.01 16 22 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 23 C -0.17 0.18 5.35 -104.67 -0.56 -0.37 16 24 C -0.07 0.11 2.79 36.01 0.10 0.21 16 25 O -0.53 0.09 12.83 -35.23 -0.45 -0.36 16 26 Si 0.68 -1.41 29.87 -169.99 -5.08 -6.49 16 27 C -0.05 0.07 8.65 -39.54 -0.34 -0.27 16 28 C -0.21 0.13 9.03 -39.47 -0.36 -0.23 16 29 H 0.06 -0.16 7.65 -51.92 -0.40 -0.56 16 30 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 31 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.40 -0.86 6.73 -40.82 -0.27 -1.14 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 35 H 0.15 -0.06 8.06 -52.48 -0.42 -0.48 16 36 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 37 H 0.15 -0.55 6.65 -52.48 -0.35 -0.90 16 38 H 0.10 -0.24 6.30 -51.93 -0.33 -0.56 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.13 -0.30 6.40 -52.49 -0.34 -0.64 16 41 H 0.12 -0.29 7.96 -51.93 -0.41 -0.71 16 42 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 0.07 7.00 56.52 0.40 0.47 16 45 H 0.13 -0.45 4.81 -52.49 -0.25 -0.70 16 46 H 0.14 -0.39 6.30 -52.48 -0.33 -0.72 16 LS Contribution 387.61 15.07 5.84 5.84 Total: 0.00 -8.85 387.61 -10.43 -19.28 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -5.18 Total: -11.10 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: -4.77 Total: -1.57 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.28 Total: -0.24 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -1.04 Total: -5.30 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.08 Total: -0.41 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.08 Total: -6.49 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.85 -10.43 -19.28 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.715 kcal (2) G-P(sol) polarization free energy of solvation -8.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds