Wall clock time and date at job start Sun Mar 7 2021 00:06:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35646 * 117.00368 * 2 1 4 4 C 1.40137 * 120.15081 * 179.97438 * 3 2 1 5 5 C 1.47531 * 120.19350 * 0.02562 * 4 3 2 6 6 O 1.21592 * 119.99882 * 359.71461 * 5 4 3 7 7 N 1.34772 * 120.00267 * 179.72208 * 5 4 3 8 8 C 1.46506 * 120.00397 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.84461 * 23.79837 * 8 7 5 10 10 C 1.53779 * 113.61723 * 154.99732 * 8 7 5 11 11 C 1.53779 * 87.08207 * 89.11776 * 10 8 7 12 12 H 1.09005 * 113.61282 * 270.80526 * 11 10 8 13 13 C 1.50696 * 113.61824 * 139.98071 * 11 10 8 14 14 C 1.38455 * 119.98931 * 119.99806 * 13 11 10 15 15 F 1.35106 * 120.00981 * 359.74617 * 14 13 11 16 16 C 1.38433 * 119.97403 * 179.72578 * 14 13 11 17 17 C 1.38400 * 119.95186 * 359.97438 * 16 14 13 18 18 F 1.35099 * 120.01226 * 179.97438 * 17 16 14 19 19 C 1.38488 * 119.97496 * 0.02562 * 17 16 14 20 20 C 1.38186 * 120.02591 * 359.97438 * 19 17 16 21 21 C 1.53780 * 87.08115 * 25.43214 * 11 10 8 22 22 C 1.39715 * 119.61704 * 179.72359 * 4 3 2 23 23 C 1.37786 * 119.90410 * 0.25754 * 22 4 3 24 24 C 1.50709 * 119.84608 * 180.02562 * 23 22 4 25 25 O 1.42899 * 109.47123 * 64.99893 * 24 23 22 26 26 Si 1.86300 * 109.46841 * 184.99918 * 24 23 22 27 27 C 1.38545 * 120.30558 * 359.97385 * 23 22 4 28 28 C 1.38051 * 120.38773 * 0.02562 * 27 23 22 29 29 H 1.09008 * 109.47180 * 300.00033 * 1 2 3 30 30 H 1.09007 * 109.47195 * 59.99699 * 1 2 3 31 31 H 1.09002 * 109.47663 * 179.97438 * 1 2 3 32 32 H 0.97002 * 120.00037 * 359.97438 * 7 5 4 33 33 H 1.09005 * 113.61292 * 334.56899 * 10 8 7 34 34 H 1.08998 * 113.61566 * 203.66485 * 10 8 7 35 35 H 1.08003 * 120.02381 * 180.02562 * 16 14 13 36 36 H 1.07999 * 119.98822 * 179.97438 * 19 17 16 37 37 H 1.08003 * 119.97619 * 180.02562 * 20 19 17 38 38 H 1.08996 * 113.61674 * 89.11528 * 21 11 10 39 39 H 1.09001 * 113.61304 * 220.02340 * 21 11 10 40 40 H 1.08001 * 120.04534 * 180.27462 * 22 4 3 41 41 H 1.08993 * 109.46807 * 304.99618 * 24 23 22 42 42 H 0.96699 * 113.99970 * 60.00366 * 25 24 23 43 43 H 1.48500 * 109.99889 * 180.02562 * 26 24 23 44 44 H 1.48504 * 109.99952 * 301.31657 * 26 24 23 45 45 H 1.08001 * 119.80622 * 180.02562 * 27 23 22 46 46 H 1.08006 * 119.96155 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2855 0.0005 5 6 4.2549 0.0530 0.0005 6 8 3.7093 -1.0336 0.0053 7 7 5.6003 0.1315 -0.0046 8 6 6.4056 -1.0924 -0.0040 9 1 5.8689 -1.9523 -0.4049 10 6 7.8088 -0.9070 -0.6052 11 6 8.2799 -0.5329 0.8100 12 1 8.1945 0.5310 1.0317 13 6 9.6307 -1.0982 1.1658 14 6 10.6730 -0.2473 1.4921 15 9 10.4805 1.0900 1.4865 16 6 11.9122 -0.7672 1.8244 17 6 12.1076 -2.1373 1.8307 18 9 13.3166 -2.6460 2.1543 19 6 11.0636 -2.9866 1.5040 20 6 9.8271 -2.4666 1.1724 21 6 7.1031 -1.3703 1.3380 22 6 4.0668 2.5362 -0.0053 23 6 3.3038 3.6835 -0.0062 24 6 3.9769 5.0319 -0.0131 25 8 4.6946 5.1998 -1.2374 26 14 2.6893 6.3695 0.1404 27 6 1.9207 3.6033 -0.0019 28 6 1.2925 2.3740 0.0039 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 6.0356 0.9984 -0.0087 33 1 7.8731 -0.0851 -1.3183 34 1 8.2481 -1.8307 -0.9817 35 1 12.7257 -0.1041 2.0795 36 1 11.2160 -4.0558 1.5083 37 1 9.0133 -3.1297 0.9181 38 1 7.3495 -2.4207 1.4928 39 1 6.5978 -0.9224 2.1937 40 1 5.1447 2.6035 -0.0094 41 1 4.6696 5.0964 0.8259 42 1 4.1397 5.1538 -2.0280 43 1 3.3402 7.7042 0.1342 44 1 1.7200 6.2724 -0.9806 45 1 1.3305 4.5077 -0.0030 46 1 0.2138 2.3195 0.0069 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:07 Heat of formation + Delta-G solvation = -99.372283 kcal Electronic energy + Delta-G solvation = -33530.645211 eV Core-core repulsion = 28603.648970 eV Total energy + Delta-G solvation = -4926.996241 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.07810 -50.04770 -41.91984 -41.17312 -39.91115 -39.22507 -38.59635 -37.23016 -34.69115 -32.69999 -31.90781 -31.81605 -31.24688 -28.52652 -26.73311 -26.46613 -26.16399 -25.14934 -24.21937 -23.10975 -22.48357 -21.58835 -20.30725 -19.51332 -19.27487 -18.46871 -18.29391 -18.16510 -17.25533 -17.20199 -17.05546 -16.85760 -16.82061 -16.48377 -16.37727 -16.16084 -16.01610 -15.84698 -15.82744 -15.52305 -15.20843 -15.19398 -14.69930 -14.52938 -14.43656 -14.01870 -13.75936 -13.59242 -13.55592 -13.48495 -13.36386 -13.10980 -12.83072 -12.56262 -12.43004 -12.21733 -12.05065 -12.03855 -11.73380 -11.66116 -11.31471 -11.05063 -10.55070 -10.28055 -10.11887 -10.01448 -9.60226 -9.30096 -4.89675 -0.26976 -0.13166 -0.03783 0.21372 1.33189 1.60736 1.75827 1.99052 2.05545 2.27003 2.27639 2.66815 2.81752 3.29292 3.41429 3.44227 3.48112 3.55602 3.63555 3.65479 3.67606 3.73881 3.86754 3.93397 3.98992 4.06769 4.14050 4.18036 4.31319 4.36917 4.39283 4.59907 4.62192 4.65979 4.71011 4.73061 4.74936 4.82689 4.84564 4.90173 4.90858 4.93231 5.00158 5.07462 5.09214 5.13585 5.26817 5.27646 5.55897 5.59271 5.72126 6.29928 6.49691 6.51684 7.20103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.312 6.312 3 C 0.173 3.827 4 C -0.197 4.197 5 C 0.561 3.439 6 O -0.561 6.561 7 N -0.702 5.702 8 C 0.116 3.884 9 H 0.093 0.907 10 C -0.123 4.123 11 C -0.071 4.071 12 H 0.101 0.899 13 C -0.111 4.111 14 C 0.116 3.884 15 F -0.138 7.138 16 C -0.198 4.198 17 C 0.108 3.892 18 F -0.142 7.142 19 C -0.154 4.154 20 C -0.056 4.056 21 C -0.137 4.137 22 C -0.017 4.017 23 C -0.164 4.164 24 C -0.074 4.074 25 O -0.547 6.547 26 Si 0.762 3.238 27 C -0.044 4.044 28 C -0.212 4.212 29 H 0.075 0.925 30 H 0.071 0.929 31 H 0.108 0.892 32 H 0.410 0.590 33 H 0.083 0.917 34 H 0.114 0.886 35 H 0.151 0.849 36 H 0.163 0.837 37 H 0.171 0.829 38 H 0.111 0.889 39 H 0.067 0.933 40 H 0.149 0.851 41 H 0.129 0.871 42 H 0.386 0.614 43 H -0.307 1.307 44 H -0.278 1.278 45 H 0.156 0.844 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.025 1.653 0.580 4.389 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.223 6.223 3 C 0.124 3.876 4 C -0.201 4.201 5 C 0.349 3.651 6 O -0.440 6.440 7 N -0.355 5.355 8 C 0.010 3.990 9 H 0.111 0.889 10 C -0.161 4.161 11 C -0.089 4.089 12 H 0.119 0.881 13 C -0.112 4.112 14 C 0.096 3.904 15 F -0.116 7.116 16 C -0.217 4.217 17 C 0.088 3.912 18 F -0.121 7.121 19 C -0.173 4.173 20 C -0.073 4.073 21 C -0.175 4.175 22 C -0.035 4.035 23 C -0.165 4.165 24 C -0.183 4.183 25 O -0.355 6.355 26 Si 0.668 3.332 27 C -0.062 4.062 28 C -0.230 4.230 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.126 0.874 32 H 0.247 0.753 33 H 0.101 0.899 34 H 0.132 0.868 35 H 0.169 0.831 36 H 0.180 0.820 37 H 0.189 0.811 38 H 0.129 0.871 39 H 0.086 0.914 40 H 0.166 0.834 41 H 0.147 0.853 42 H 0.236 0.764 43 H -0.235 1.235 44 H -0.205 1.205 45 H 0.173 0.827 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.161 1.438 0.632 4.447 hybrid contribution 0.786 0.478 -0.966 1.334 sum -3.375 1.916 -0.333 3.895 Atomic orbital electron populations 1.23451 0.76524 1.05502 1.02836 1.86331 1.23187 1.26326 1.86505 1.19405 0.91311 0.85567 0.91305 1.19400 0.91167 0.93963 1.15542 1.18250 0.82500 0.88621 0.75680 1.90810 1.72389 1.30189 1.50586 1.45517 1.05039 1.09930 1.74995 1.21862 0.91404 0.88021 0.97687 0.88907 1.23427 0.93136 1.04170 0.95387 1.21522 0.89358 1.00389 0.97673 0.88052 1.19964 0.95071 0.93887 1.02316 1.17315 0.93918 0.77370 1.01766 1.91504 1.95586 1.30444 1.94078 1.21162 0.98469 0.95209 1.06908 1.17558 0.81464 0.91395 1.00760 1.91525 1.42799 1.87513 1.90218 1.21514 0.92097 1.01782 1.01883 1.21070 0.97129 0.93590 0.95532 1.23586 0.94936 1.01722 0.97284 1.21108 1.00637 0.89268 0.92503 1.20153 0.93796 0.95827 1.06703 1.25119 1.04620 0.98809 0.89770 1.86584 1.38470 1.94292 1.16171 0.94152 0.76740 0.74004 0.88312 1.21310 0.93842 0.97996 0.93004 1.21468 1.01764 0.90890 1.08924 0.90681 0.91039 0.87399 0.75260 0.89881 0.86785 0.83129 0.81969 0.81134 0.87057 0.91399 0.83380 0.85306 0.76448 1.23521 1.20477 0.82712 0.82042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.39 8.57 -68.69 -0.59 -2.98 16 3 C 0.17 0.79 6.70 22.84 0.15 0.95 16 4 C -0.20 -0.87 5.89 -20.01 -0.12 -0.99 16 5 C 0.56 4.33 7.76 86.69 0.67 5.00 16 6 O -0.56 -8.97 14.76 16.91 0.25 -8.72 16 7 N -0.70 -0.47 5.21 -443.20 -2.31 -2.78 16 8 C 0.12 -0.10 4.32 45.52 0.20 0.10 16 9 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 10 C -0.12 0.61 7.29 31.12 0.23 0.83 16 11 C -0.07 0.26 3.78 -11.02 -0.04 0.21 16 12 H 0.10 -0.30 7.45 -2.38 -0.02 -0.32 16 13 C -0.11 0.19 5.29 -19.81 -0.10 0.08 16 14 C 0.12 0.22 7.24 22.37 0.16 0.38 16 15 F -0.14 -0.55 16.36 44.97 0.74 0.19 16 16 C -0.20 -0.42 10.01 22.35 0.22 -0.19 16 17 C 0.11 0.21 7.30 22.37 0.16 0.37 16 18 F -0.14 -0.69 17.27 44.97 0.78 0.08 16 19 C -0.15 0.39 10.02 22.32 0.22 0.61 16 20 C -0.06 0.25 8.62 22.26 0.19 0.44 16 21 C -0.14 0.41 7.25 31.12 0.23 0.63 16 22 C -0.02 0.02 9.16 22.52 0.21 0.22 16 23 C -0.16 0.51 5.35 -19.90 -0.11 0.41 16 24 C -0.07 0.32 2.79 71.24 0.20 0.52 16 25 O -0.55 0.59 12.83 -148.98 -1.91 -1.32 16 26 Si 0.76 -3.82 29.87 68.60 2.05 -1.77 16 27 C -0.04 0.19 8.65 22.30 0.19 0.38 16 28 C -0.21 0.40 9.03 22.34 0.20 0.60 16 29 H 0.07 -0.43 7.65 -2.38 -0.02 -0.44 16 30 H 0.07 -0.37 7.67 -2.38 -0.02 -0.39 16 31 H 0.11 -0.35 8.14 -2.39 -0.02 -0.37 16 32 H 0.41 -1.67 6.73 -92.71 -0.62 -2.30 16 33 H 0.08 -0.42 8.14 -2.38 -0.02 -0.44 16 34 H 0.11 -0.82 7.73 -2.39 -0.02 -0.84 16 35 H 0.15 0.09 8.06 -2.91 -0.02 0.07 16 36 H 0.16 -1.05 8.06 -2.91 -0.02 -1.07 16 37 H 0.17 -1.68 6.65 -2.91 -0.02 -1.70 16 38 H 0.11 -0.66 6.30 -2.39 -0.02 -0.67 16 39 H 0.07 -0.03 8.14 -2.39 -0.02 -0.04 16 40 H 0.15 -0.72 6.40 -2.91 -0.02 -0.74 16 41 H 0.13 -0.80 7.96 -2.39 -0.02 -0.82 16 42 H 0.39 -2.40 8.70 -74.06 -0.64 -3.04 16 43 H -0.31 -1.14 7.11 99.48 0.71 -0.43 16 44 H -0.28 0.52 7.00 99.48 0.70 1.22 16 45 H 0.16 -1.37 4.81 -2.91 -0.01 -1.39 16 46 H 0.16 -1.12 6.30 -2.91 -0.02 -1.14 16 Total: 0.00 -23.08 387.61 2.82 -20.26 By element: Atomic # 1 Polarization: -14.45 SS G_CDS: -0.16 Total: -14.62 kcal Atomic # 6 Polarization: 7.67 SS G_CDS: 3.98 Total: 11.66 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -2.31 Total: -2.78 kcal Atomic # 8 Polarization: -10.77 SS G_CDS: -2.25 Total: -13.02 kcal Atomic # 9 Polarization: -1.24 SS G_CDS: 1.51 Total: 0.27 kcal Atomic # 14 Polarization: -3.82 SS G_CDS: 2.05 Total: -1.77 kcal Total: -23.08 2.82 -20.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.110 kcal (2) G-P(sol) polarization free energy of solvation -23.080 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds