Wall clock time and date at job start Sun Mar 7 2021 00:06:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.46936 * 2 1 4 4 C 1.50702 * 109.47180 * 240.00368 * 2 1 3 5 5 C 1.37816 * 119.93835 * 255.32051 * 4 2 1 6 6 C 1.39670 * 119.87581 * 180.29520 * 5 4 2 7 7 C 1.47724 * 120.11428 * 179.67665 * 6 5 4 8 8 O 1.21568 * 120.00468 * 359.72786 * 7 6 5 9 9 N 1.34781 * 119.99659 * 179.72965 * 7 6 5 10 10 C 1.46504 * 119.99665 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85136 * 336.19533 * 10 9 7 12 12 C 1.53779 * 113.61484 * 107.49929 * 10 9 7 13 13 C 1.53785 * 87.08093 * 89.11287 * 12 10 9 14 14 H 1.09002 * 113.61570 * 270.88522 * 13 12 10 15 15 C 1.50701 * 113.69000 * 139.98979 * 13 12 10 16 16 C 1.38460 * 119.98537 * 140.65869 * 15 13 12 17 17 F 1.35095 * 120.00810 * 0.02967 * 16 15 13 18 18 C 1.38441 * 119.97289 * 179.76781 * 16 15 13 19 19 C 1.38398 * 119.94756 * 0.48683 * 18 16 15 20 20 F 1.35097 * 120.01327 * 179.78756 * 19 18 16 21 21 C 1.38495 * 119.97581 * 359.77361 * 19 18 16 22 22 C 1.38183 * 120.02784 * 359.97438 * 21 19 18 23 23 C 1.53781 * 87.08241 * 25.43228 * 13 12 10 24 24 C 1.39631 * 119.76409 * 359.40414 * 6 5 4 25 25 C 1.37851 * 119.88135 * 0.27656 * 24 6 5 26 26 C 1.38634 * 120.11785 * 0.02562 * 25 24 6 27 27 F 1.35100 * 119.88160 * 179.97438 * 26 25 24 28 28 H 0.96704 * 114.00351 * 59.99617 * 1 2 3 29 29 H 1.09001 * 109.47621 * 119.99861 * 2 1 3 30 30 H 1.48507 * 110.00190 * 59.99980 * 3 2 1 31 31 H 1.48499 * 110.00269 * 181.31826 * 3 2 1 32 32 H 1.07995 * 120.06057 * 359.97438 * 5 4 2 33 33 H 0.96996 * 120.00382 * 359.97438 * 9 7 6 34 34 H 1.09003 * 113.61775 * 334.57164 * 12 10 9 35 35 H 1.08996 * 113.61960 * 203.65890 * 12 10 9 36 36 H 1.07991 * 120.02736 * 180.25786 * 18 16 15 37 37 H 1.08001 * 119.98764 * 180.02562 * 21 19 18 38 38 H 1.07997 * 119.97482 * 180.02562 * 22 21 19 39 39 H 1.09005 * 113.61302 * 89.11252 * 23 13 12 40 40 H 1.08993 * 113.62030 * 220.02098 * 23 13 12 41 41 H 1.08000 * 120.05738 * 180.29280 * 24 6 5 42 42 H 1.08001 * 119.94170 * 180.02562 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4459 -1.9846 -1.1272 6 6 2.9168 -2.6394 -2.2675 7 6 3.4761 -4.0026 -2.1616 8 8 3.5316 -4.5546 -1.0799 9 7 3.9248 -4.6343 -3.2644 10 6 4.4789 -5.9865 -3.1595 11 1 4.8556 -6.2134 -2.1622 12 6 3.5585 -7.0757 -3.7349 13 6 4.2531 -6.8383 -5.0863 14 1 3.7791 -6.0652 -5.6910 15 6 4.5217 -8.1036 -5.8596 16 6 4.3518 -8.1242 -7.2335 17 9 3.9458 -7.0101 -7.8809 18 6 4.6032 -9.2853 -7.9443 19 6 5.0146 -10.4271 -7.2791 20 9 5.2563 -11.5621 -7.9708 21 6 5.1788 -10.4056 -5.9041 22 6 4.9325 -9.2447 -5.1963 23 6 5.4662 -6.3365 -4.2854 24 6 2.8519 -2.0031 -3.5087 25 6 2.3291 -0.7309 -3.6018 26 6 1.8689 -0.0831 -2.4658 27 9 1.3580 1.1638 -2.5624 28 1 -0.3934 0.4418 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5614 2.4680 1.2085 31 1 3.5345 1.7704 -0.0321 32 1 2.4898 -2.4740 -0.1655 33 1 3.8802 -4.1941 -4.1276 34 1 2.5034 -6.8020 -3.7324 35 1 3.7408 -8.0663 -3.3184 36 1 4.4750 -9.3011 -9.0164 37 1 5.5002 -11.2964 -5.3848 38 1 5.0611 -9.2288 -4.1241 39 1 6.1702 -7.1251 -4.0193 40 1 5.9513 -5.4661 -4.7270 41 1 3.2103 -2.5068 -4.3942 42 1 2.2780 -0.2380 -4.5614 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:12 Heat of formation + Delta-G solvation = -115.631670 kcal Electronic energy + Delta-G solvation = -31072.599186 eV Core-core repulsion = 26149.663720 eV Total energy + Delta-G solvation = -4922.935466 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.50922 -50.10030 -50.03323 -41.88404 -40.90001 -39.73417 -38.70956 -37.68753 -34.87306 -32.99582 -32.26549 -31.93300 -31.30377 -27.11520 -26.96128 -26.56298 -25.10911 -24.26158 -23.64067 -22.97004 -21.72767 -20.48989 -19.48335 -19.24548 -18.82751 -18.30736 -17.93086 -17.90221 -17.42016 -17.14428 -17.07134 -16.94314 -16.61671 -16.36781 -16.31669 -16.07938 -15.73475 -15.56553 -15.51173 -15.34886 -15.17632 -14.87953 -14.56282 -14.24112 -14.12554 -14.04805 -13.92381 -13.72643 -13.61423 -13.46336 -13.01544 -12.90352 -12.69086 -12.39391 -12.24378 -11.96625 -11.90706 -11.50930 -11.18223 -10.70414 -10.32947 -10.23089 -10.19125 -9.96510 -9.68858 -4.85669 -0.63183 -0.22017 -0.14318 -0.13185 1.18603 1.49312 1.64735 1.83542 1.96284 2.16300 2.45442 2.74301 2.78720 3.12589 3.17746 3.30968 3.33733 3.38227 3.40828 3.45410 3.48996 3.50362 3.67888 3.74511 3.75904 3.88421 3.97318 4.02560 4.19043 4.40494 4.45119 4.48200 4.57092 4.61182 4.62854 4.67085 4.70083 4.73148 4.78915 4.81148 4.85628 4.88250 4.92707 4.96961 5.10310 5.36845 5.44849 5.61625 6.26049 6.42113 7.01057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.069 4.069 3 Si 0.672 3.328 4 C -0.154 4.154 5 C -0.012 4.012 6 C -0.144 4.144 7 C 0.565 3.435 8 O -0.527 6.527 9 N -0.709 5.709 10 C 0.120 3.880 11 H 0.111 0.889 12 C -0.142 4.142 13 C -0.076 4.076 14 H 0.103 0.897 15 C -0.115 4.115 16 C 0.133 3.867 17 F -0.129 7.129 18 C -0.190 4.190 19 C 0.128 3.872 20 F -0.130 7.130 21 C -0.159 4.159 22 C -0.060 4.060 23 C -0.135 4.135 24 C -0.056 4.056 25 C -0.149 4.149 26 C 0.123 3.877 27 F -0.106 7.106 28 H 0.378 0.622 29 H 0.121 0.879 30 H -0.246 1.246 31 H -0.253 1.253 32 H 0.149 0.851 33 H 0.401 0.599 34 H 0.078 0.922 35 H 0.098 0.902 36 H 0.149 0.851 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.102 0.898 40 H 0.080 0.920 41 H 0.139 0.861 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.113 0.906 -3.945 4.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.179 4.179 3 Si 0.572 3.428 4 C -0.155 4.155 5 C -0.031 4.031 6 C -0.147 4.147 7 C 0.352 3.648 8 O -0.403 6.403 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.181 4.181 13 C -0.094 4.094 14 H 0.122 0.878 15 C -0.116 4.116 16 C 0.114 3.886 17 F -0.107 7.107 18 C -0.209 4.209 19 C 0.108 3.892 20 F -0.108 7.108 21 C -0.178 4.178 22 C -0.078 4.078 23 C -0.172 4.172 24 C -0.075 4.075 25 C -0.168 4.168 26 C 0.104 3.896 27 F -0.085 7.085 28 H 0.225 0.775 29 H 0.138 0.862 30 H -0.171 1.171 31 H -0.177 1.177 32 H 0.166 0.834 33 H 0.237 0.763 34 H 0.097 0.903 35 H 0.117 0.883 36 H 0.167 0.833 37 H 0.163 0.837 38 H 0.163 0.837 39 H 0.120 0.880 40 H 0.099 0.901 41 H 0.157 0.843 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.709 0.836 -2.229 2.931 hybrid contribution -0.083 -0.352 -0.886 0.957 sum 1.626 0.484 -3.115 3.547 Atomic orbital electron populations 1.86563 1.16503 1.81514 1.49225 1.25025 0.85571 1.10778 0.96546 0.94608 0.81382 0.78734 0.88050 1.20369 1.03953 0.96420 0.94790 1.21054 0.91467 0.91490 0.99124 1.19980 1.04895 0.95284 0.94531 1.18105 0.77447 0.85116 0.84085 1.90825 1.55171 1.67160 1.27175 1.45564 1.63538 1.16648 1.10351 1.21864 0.94523 0.81395 1.00726 0.87151 1.23588 1.00310 0.99881 0.94288 1.21565 0.98323 0.94406 0.95091 0.87845 1.19787 1.03124 0.97087 0.91638 1.17135 0.99028 0.82736 0.89709 1.91524 1.87690 1.50023 1.81481 1.21084 1.05952 0.91746 1.02158 1.17343 0.99686 0.82252 0.89879 1.91562 1.91649 1.48202 1.79406 1.21262 1.03813 1.00478 0.92220 1.20769 0.95922 0.90423 1.00658 1.23458 0.96159 1.02207 0.95424 1.21190 0.95643 0.93894 0.96742 1.21089 1.01491 0.95880 0.98298 1.17777 0.97303 0.80319 0.94222 1.91187 1.84304 1.38023 1.94939 0.77463 0.86195 1.17090 1.17738 0.83352 0.76282 0.90287 0.88318 0.83290 0.83730 0.83682 0.87954 0.90133 0.84331 0.83182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.46 12.88 -35.23 -0.45 -0.92 16 2 C -0.07 -0.02 2.80 36.01 0.10 0.09 16 3 Si 0.67 0.07 29.57 -169.99 -5.03 -4.96 16 4 C -0.15 0.02 4.78 -104.61 -0.50 -0.48 16 5 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 6 C -0.14 0.06 5.87 -104.97 -0.62 -0.56 16 7 C 0.56 0.50 7.77 -12.38 -0.10 0.40 16 8 O -0.53 -2.50 15.94 5.31 0.08 -2.41 16 9 N -0.71 1.50 5.21 -53.99 -0.28 1.22 16 10 C 0.12 -0.27 4.32 -67.11 -0.29 -0.56 16 11 H 0.11 -0.08 7.46 -51.93 -0.39 -0.47 16 12 C -0.14 0.38 7.26 -25.92 -0.19 0.19 16 13 C -0.08 0.22 3.78 -90.96 -0.34 -0.12 16 14 H 0.10 -0.31 7.42 -51.93 -0.39 -0.70 16 15 C -0.12 0.19 5.30 -104.54 -0.55 -0.37 16 16 C 0.13 -0.02 7.25 -39.42 -0.29 -0.31 16 17 F -0.13 -0.07 16.35 2.25 0.04 -0.04 16 18 C -0.19 0.02 10.01 -39.45 -0.39 -0.38 16 19 C 0.13 0.02 7.30 -39.43 -0.29 -0.27 16 20 F -0.13 -0.20 17.27 2.25 0.04 -0.16 16 21 C -0.16 0.24 10.02 -39.51 -0.40 -0.15 16 22 C -0.06 0.15 8.54 -39.60 -0.34 -0.19 16 23 C -0.13 0.49 7.29 -25.92 -0.19 0.30 16 24 C -0.06 0.17 9.54 -39.20 -0.37 -0.21 16 25 C -0.15 0.42 10.01 -39.58 -0.40 0.03 16 26 C 0.12 -0.17 6.63 -39.27 -0.26 -0.43 16 27 F -0.11 0.22 13.46 2.25 0.03 0.26 16 28 H 0.38 -1.01 8.41 45.56 0.38 -0.63 16 29 H 0.12 0.02 7.77 -51.93 -0.40 -0.38 16 30 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 31 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 32 H 0.15 0.15 7.59 -52.49 -0.40 -0.25 16 33 H 0.40 -1.88 6.73 -40.82 -0.27 -2.15 16 34 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.10 -0.34 6.40 -51.93 -0.33 -0.67 16 36 H 0.15 -0.16 8.06 -52.49 -0.42 -0.59 16 37 H 0.14 -0.45 8.06 -52.49 -0.42 -0.87 16 38 H 0.15 -0.68 6.72 -52.49 -0.35 -1.03 16 39 H 0.10 -0.43 7.64 -51.93 -0.40 -0.82 16 40 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 41 H 0.14 -0.83 6.40 -52.49 -0.34 -1.17 16 42 H 0.15 -0.76 8.06 -52.49 -0.42 -1.18 16 LS Contribution 365.56 15.07 5.51 5.51 Total: 0.00 -7.60 365.56 -10.03 -17.63 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -4.19 Total: -12.74 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -5.77 Total: -3.39 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -0.28 Total: 1.22 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -0.37 Total: -3.33 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.11 Total: 0.06 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.03 Total: -4.96 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -7.60 -10.03 -17.63 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.000 kcal (2) G-P(sol) polarization free energy of solvation -7.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds