Wall clock time and date at job start Sun Mar 7 2021 00:06:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.46889 * 2 1 4 4 C 1.50705 * 109.46956 * 120.00060 * 2 1 3 5 5 C 1.34828 * 125.65410 * 64.99909 * 4 2 1 6 6 C 1.40800 * 107.04950 * 179.97438 * 5 4 2 7 7 C 1.36105 * 106.73149 * 0.02562 * 6 5 4 8 8 C 1.47564 * 125.93937 * 180.02562 * 7 6 5 9 9 C 1.39923 * 119.96138 * 359.71979 * 8 7 6 10 10 C 1.36423 * 120.28195 * 179.75915 * 9 8 7 11 11 C 1.39874 * 120.18615 * 0.52067 * 10 9 8 12 12 C 1.47290 * 120.05000 * 179.71644 * 11 10 9 13 13 O 1.21627 * 120.00107 * 180.02562 * 12 11 10 14 14 N 1.34779 * 120.00139 * 0.02562 * 12 11 10 15 15 C 1.46490 * 120.00472 * 180.02562 * 14 12 11 16 16 H 1.09006 * 112.84751 * 336.19609 * 15 14 12 17 17 C 1.53777 * 113.61936 * 107.50195 * 15 14 12 18 18 C 1.53781 * 87.08180 * 89.11568 * 17 15 14 19 19 H 1.08996 * 113.69101 * 270.87615 * 18 17 15 20 20 C 1.50702 * 113.61337 * 139.98427 * 18 17 15 21 21 C 1.38451 * 119.98792 * 142.23219 * 20 18 17 22 22 F 1.35098 * 120.01007 * 0.02562 * 21 20 18 23 23 C 1.38440 * 119.97680 * 179.76999 * 21 20 18 24 24 C 1.38401 * 119.94498 * 0.47974 * 23 21 20 25 25 F 1.35100 * 120.00916 * 179.79710 * 24 23 21 26 26 C 1.38493 * 119.97769 * 359.76659 * 24 23 21 27 27 C 1.38190 * 120.02478 * 0.02562 * 26 24 23 28 28 C 1.53780 * 87.07967 * 25.43396 * 18 17 15 29 29 C 1.40413 * 119.90504 * 359.74039 * 11 10 9 30 30 O 1.35679 * 120.13621 * 180.02562 * 29 11 10 31 31 C 1.38267 * 119.72713 * 359.97438 * 29 11 10 32 32 O 1.34228 * 125.65121 * 244.97633 * 4 2 1 33 33 H 0.96694 * 113.99914 * 300.00079 * 1 2 3 34 34 H 1.08999 * 109.46983 * 239.99844 * 2 1 3 35 35 H 1.48509 * 109.99936 * 178.67953 * 3 2 1 36 36 H 1.48498 * 110.00184 * 299.99559 * 3 2 1 37 37 H 1.08003 * 126.47419 * 359.97438 * 5 4 2 38 38 H 1.08000 * 126.63150 * 180.26218 * 6 5 4 39 39 H 1.07997 * 119.85733 * 0.02890 * 9 8 7 40 40 H 1.07996 * 119.91114 * 180.28355 * 10 9 8 41 41 H 0.96999 * 119.99453 * 0.02562 * 14 12 11 42 42 H 1.08994 * 113.61948 * 203.66805 * 17 15 14 43 43 H 1.08998 * 113.61188 * 334.56973 * 17 15 14 44 44 H 1.07991 * 120.02882 * 180.25214 * 23 21 20 45 45 H 1.07997 * 119.98961 * 179.97438 * 26 24 23 46 46 H 1.08002 * 119.97460 * 179.97438 * 27 26 24 47 47 H 1.09001 * 113.61703 * 220.01475 * 28 18 17 48 48 H 1.09008 * 113.61127 * 89.11263 * 28 18 17 49 49 H 0.96699 * 113.99922 * 269.98209 * 30 29 11 50 50 H 1.08002 * 120.09562 * 179.97438 * 31 29 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7567 -2.0180 1.5094 6 6 2.3810 -2.2630 2.7474 7 6 2.9080 -1.0784 3.1617 8 6 3.6579 -0.8544 4.4127 9 6 3.8748 -1.9167 5.2972 10 6 4.5714 -1.7181 6.4532 11 6 5.0646 -0.4476 6.7676 12 6 5.8110 -0.2351 8.0196 13 8 6.2391 0.8702 8.2923 14 7 6.0195 -1.2655 8.8629 15 6 6.7613 -1.0542 10.1084 16 1 7.4267 -0.1920 10.0636 17 6 5.8765 -1.0872 11.3656 18 6 6.1307 -2.6032 11.4090 19 1 5.4069 -3.1851 10.8385 20 6 6.3462 -3.1396 12.8008 21 6 5.8351 -4.3774 13.1522 22 9 5.1439 -5.1046 12.2475 23 6 6.0373 -4.8720 14.4293 24 6 6.7416 -4.1238 15.3564 25 9 6.9361 -4.6035 16.6044 26 6 7.2475 -2.8836 15.0043 27 6 7.0488 -2.3929 13.7279 28 6 7.4371 -2.3265 10.6463 29 6 4.8469 0.6253 5.8883 30 8 5.3237 1.8596 6.1884 31 6 4.1454 0.4184 4.7149 32 8 2.6271 -0.1465 2.2303 33 1 -0.3933 0.4417 0.7650 34 1 1.7923 -0.5139 -0.8900 35 1 3.5346 1.7703 0.0322 36 1 1.5615 2.4678 -1.2085 37 1 1.2363 -2.7408 0.8985 38 1 2.4349 -3.2088 3.2660 39 1 3.4928 -2.8991 5.0616 40 1 4.7392 -2.5433 7.1294 41 1 5.6784 -2.1471 8.6452 42 1 6.3013 -0.5488 12.2128 43 1 4.8361 -0.8242 11.1744 44 1 5.6425 -5.8392 14.7030 45 1 7.7968 -2.2995 15.7277 46 1 7.4433 -1.4254 13.4542 47 1 7.6566 -3.0641 9.8744 48 1 8.2886 -2.1269 11.2970 49 1 4.7073 2.4072 6.6935 50 1 3.9741 1.2395 4.0344 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:28 Heat of formation + Delta-G solvation = -90.292080 kcal Electronic energy + Delta-G solvation = -39136.802007 eV Core-core repulsion = 33506.838899 eV Total energy + Delta-G solvation = -5629.963108 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.131 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -50.07972 -50.01730 -43.77507 -41.87225 -41.03025 -39.71252 -38.58923 -38.11798 -37.83107 -34.80276 -34.22768 -33.34628 -31.98242 -31.58985 -31.28786 -30.43111 -27.28331 -26.92332 -26.22533 -24.70067 -24.24285 -24.11087 -23.05360 -22.46749 -22.09302 -21.40795 -20.42410 -19.71939 -19.38655 -18.87653 -18.56440 -18.25186 -17.76083 -17.52342 -17.36003 -17.15300 -17.05374 -16.79677 -16.63261 -16.37903 -16.33968 -16.10779 -15.96986 -15.80379 -15.61436 -15.48195 -15.30272 -15.12706 -14.74482 -14.38901 -14.25906 -14.13249 -14.04656 -13.92053 -13.87105 -13.69107 -13.65844 -13.57298 -13.51843 -12.90619 -12.89467 -12.78712 -12.66371 -12.20283 -12.13847 -11.88917 -11.85557 -11.45192 -11.16682 -10.84202 -10.77232 -10.62427 -10.21761 -10.13323 -10.00569 -9.66803 -9.05782 -5.09726 -0.83105 -0.19975 -0.12480 0.06802 0.61896 1.08229 1.36429 1.42738 1.72265 1.88436 1.92677 1.95388 2.18449 2.58854 2.76171 2.96924 3.16784 3.18361 3.31353 3.33426 3.37042 3.47552 3.48232 3.53516 3.59416 3.71848 3.78500 3.81200 3.86141 3.90322 3.91578 4.04541 4.11536 4.23235 4.32841 4.45006 4.51358 4.51796 4.61069 4.62686 4.66378 4.69836 4.73598 4.76169 4.79912 4.81630 4.84501 4.93265 4.94850 4.95992 5.04613 5.13172 5.14366 5.34254 5.41181 5.47258 5.63534 5.92423 6.32956 6.37523 6.65197 7.15795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.045 4.045 5 C -0.174 4.174 6 C -0.177 4.177 7 C 0.022 3.978 8 C 0.031 3.969 9 C -0.116 4.116 10 C -0.064 4.064 11 C -0.166 4.166 12 C 0.562 3.438 13 O -0.515 6.515 14 N -0.712 5.712 15 C 0.122 3.878 16 H 0.110 0.890 17 C -0.142 4.142 18 C -0.076 4.076 19 H 0.103 0.897 20 C -0.115 4.115 21 C 0.133 3.867 22 F -0.129 7.129 23 C -0.190 4.190 24 C 0.127 3.873 25 F -0.130 7.130 26 C -0.159 4.159 27 C -0.060 4.060 28 C -0.135 4.135 29 C 0.180 3.820 30 O -0.474 6.474 31 C -0.141 4.141 32 O -0.161 6.161 33 H 0.384 0.616 34 H 0.134 0.866 35 H -0.252 1.252 36 H -0.245 1.245 37 H 0.155 0.845 38 H 0.156 0.844 39 H 0.139 0.861 40 H 0.136 0.864 41 H 0.400 0.600 42 H 0.098 0.902 43 H 0.078 0.922 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.146 0.854 47 H 0.079 0.921 48 H 0.101 0.899 49 H 0.399 0.601 50 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.201 -1.080 1.439 2.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.599 3.401 4 C -0.095 4.095 5 C -0.193 4.193 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.170 4.170 12 C 0.350 3.650 13 O -0.390 6.390 14 N -0.365 5.365 15 C 0.017 3.983 16 H 0.128 0.872 17 C -0.181 4.181 18 C -0.094 4.094 19 H 0.121 0.879 20 C -0.116 4.116 21 C 0.114 3.886 22 F -0.107 7.107 23 C -0.210 4.210 24 C 0.108 3.892 25 F -0.108 7.108 26 C -0.178 4.178 27 C -0.078 4.078 28 C -0.173 4.173 29 C 0.133 3.867 30 O -0.285 6.285 31 C -0.159 4.159 32 O -0.058 6.058 33 H 0.232 0.768 34 H 0.151 0.849 35 H -0.176 1.176 36 H -0.169 1.169 37 H 0.173 0.827 38 H 0.174 0.826 39 H 0.157 0.843 40 H 0.154 0.846 41 H 0.235 0.765 42 H 0.116 0.884 43 H 0.096 0.904 44 H 0.167 0.833 45 H 0.163 0.837 46 H 0.164 0.836 47 H 0.098 0.902 48 H 0.120 0.880 49 H 0.258 0.742 50 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -0.748 0.108 0.386 0.848 hybrid contribution -0.703 -1.679 0.205 1.832 sum -1.451 -1.570 0.591 2.218 Atomic orbital electron populations 1.86567 1.16085 1.81733 1.49155 1.24425 0.85246 1.11295 0.92890 0.94271 0.81711 0.76828 0.87253 1.23000 1.00437 0.93909 0.92158 1.21584 1.04000 0.95691 0.98018 1.21915 1.01918 0.98379 0.97367 1.20315 1.03812 0.87544 0.91067 1.17758 0.95548 0.93694 0.89917 1.20704 1.00209 0.98715 0.93800 1.20810 0.95350 0.95513 0.96590 1.20457 1.04897 0.95119 0.96497 1.17963 0.79625 0.84536 0.82866 1.90851 1.49437 1.23495 1.75231 1.45586 1.57604 1.12278 1.21015 1.21820 0.94055 0.99511 0.82961 0.87228 1.23586 1.01701 0.94329 0.98447 1.21564 0.99115 0.96952 0.91754 0.87867 1.19797 1.00807 0.93623 0.97354 1.17136 0.94789 0.90194 0.86521 1.91525 1.76594 1.76685 1.65926 1.21081 1.04260 1.02920 0.92689 1.17344 0.98554 0.93238 0.80073 1.91561 1.93128 1.88075 1.38078 1.21262 1.02971 0.95228 0.98309 1.20782 0.95983 0.99698 0.91325 1.23457 0.96814 0.97282 0.99753 1.18275 0.91292 0.85755 0.91385 1.84779 1.44629 1.22721 1.76406 1.21594 0.98737 0.97535 0.98065 1.83934 1.57598 1.37870 1.26422 0.76810 0.84887 1.17634 1.16946 0.82694 0.82616 0.84343 0.84645 0.76455 0.88381 0.90364 0.83313 0.83740 0.83649 0.90188 0.88023 0.74204 0.83766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.40 12.88 -35.23 -0.45 -0.05 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.74 32.11 -169.99 -5.46 -6.20 16 4 C -0.04 -0.02 6.21 -35.52 -0.22 -0.24 16 5 C -0.17 -0.05 10.78 -39.82 -0.43 -0.48 16 6 C -0.18 0.03 10.26 -39.38 -0.40 -0.37 16 7 C 0.02 0.01 7.02 -36.55 -0.26 -0.24 16 8 C 0.03 0.00 5.87 -104.95 -0.62 -0.62 16 9 C -0.12 0.21 9.48 -39.61 -0.38 -0.16 16 10 C -0.06 0.13 9.47 -39.62 -0.38 -0.24 16 11 C -0.17 -0.07 5.89 -104.79 -0.62 -0.68 16 12 C 0.56 0.85 7.75 -12.58 -0.10 0.75 16 13 O -0.51 -2.60 14.74 -16.70 -0.25 -2.85 16 14 N -0.71 1.07 5.21 -54.14 -0.28 0.79 16 15 C 0.12 -0.22 4.32 -67.13 -0.29 -0.51 16 16 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 17 C -0.14 0.36 7.25 -25.92 -0.19 0.17 16 18 C -0.08 0.20 3.78 -90.96 -0.34 -0.15 16 19 H 0.10 -0.27 7.44 -51.93 -0.39 -0.66 16 20 C -0.11 0.16 5.29 -104.55 -0.55 -0.39 16 21 C 0.13 0.00 7.24 -39.43 -0.29 -0.29 16 22 F -0.13 -0.10 16.36 2.25 0.04 -0.06 16 23 C -0.19 -0.01 10.01 -39.45 -0.39 -0.40 16 24 C 0.13 0.03 7.30 -39.43 -0.29 -0.25 16 25 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 26 C -0.16 0.22 10.03 -39.51 -0.40 -0.17 16 27 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 28 C -0.14 0.42 7.29 -25.92 -0.19 0.23 16 29 C 0.18 0.22 6.71 -38.75 -0.26 -0.04 16 30 O -0.47 -0.91 11.56 -40.70 -0.47 -1.38 16 31 C -0.14 -0.06 9.65 -39.06 -0.38 -0.44 16 32 O -0.16 -0.16 8.79 4.75 0.04 -0.12 16 33 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 34 H 0.13 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 36 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 37 H 0.16 -0.13 8.06 -52.48 -0.42 -0.55 16 38 H 0.16 -0.39 7.24 -52.49 -0.38 -0.77 16 39 H 0.14 -0.55 6.95 -52.49 -0.36 -0.92 16 40 H 0.14 -0.69 6.38 -52.49 -0.33 -1.02 16 41 H 0.40 -1.57 6.71 -40.82 -0.27 -1.84 16 42 H 0.10 -0.33 6.31 -51.93 -0.33 -0.66 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.15 -0.14 8.06 -52.49 -0.42 -0.57 16 45 H 0.14 -0.44 8.06 -52.49 -0.42 -0.86 16 46 H 0.15 -0.65 6.66 -52.49 -0.35 -1.00 16 47 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 48 H 0.10 -0.38 7.72 -51.92 -0.40 -0.78 16 49 H 0.40 -0.78 9.06 45.56 0.41 -0.37 16 50 H 0.14 -0.04 7.90 -52.49 -0.41 -0.45 16 LS Contribution 433.26 15.07 6.53 6.53 Total: 0.00 -10.17 433.26 -11.99 -22.16 By element: Atomic # 1 Polarization: -9.51 SS G_CDS: -4.54 Total: -14.04 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -7.19 Total: -4.59 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.28 Total: 0.79 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -1.13 Total: -4.40 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.08 Total: -0.24 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.46 Total: -6.20 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -10.17 -11.99 -22.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.137 kcal (2) G-P(sol) polarization free energy of solvation -10.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds