Wall clock time and date at job start Sun Mar 7 2021 00:06:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47358 * 2 1 4 4 C 1.50698 * 109.47319 * 119.99913 * 2 1 3 5 5 C 1.38903 * 119.67960 * 245.00045 * 4 2 1 6 6 C 1.36469 * 120.61884 * 180.02562 * 5 4 2 7 7 C 1.40063 * 119.82869 * 0.02562 * 6 5 4 8 8 C 1.41597 * 133.38166 * 180.32762 * 7 6 5 9 9 C 1.35863 * 107.72699 * 180.11068 * 8 7 6 10 10 C 1.47062 * 125.42514 * 179.84396 * 9 8 7 11 11 O 1.21646 * 120.00048 * 359.69743 * 10 9 8 12 12 N 1.34776 * 119.99931 * 179.69379 * 10 9 8 13 13 C 1.46499 * 119.99649 * 180.02562 * 12 10 9 14 14 H 1.08998 * 112.85748 * 336.19479 * 13 12 10 15 15 C 1.53781 * 113.61623 * 107.51042 * 13 12 10 16 16 C 1.53769 * 87.08595 * 89.11113 * 15 13 12 17 17 H 1.09002 * 113.69444 * 270.87769 * 16 15 13 18 18 C 1.50694 * 113.61720 * 139.98327 * 16 15 13 19 19 C 1.38458 * 119.99216 * 142.52499 * 18 16 15 20 20 F 1.35102 * 120.00849 * 359.95554 * 19 18 16 21 21 C 1.38433 * 119.97753 * 179.97438 * 19 18 16 22 22 C 1.38408 * 119.95015 * 359.76620 * 21 19 18 23 23 F 1.35097 * 120.01340 * 180.22576 * 22 21 19 24 24 C 1.38491 * 119.97177 * 0.49160 * 22 21 19 25 25 C 1.38191 * 120.02630 * 359.48296 * 24 22 21 26 26 C 1.53785 * 113.61162 * 205.00341 * 13 12 10 27 27 N 1.38144 * 109.15013 * 359.58140 * 9 8 7 28 28 C 1.37491 * 108.78712 * 0.26572 * 27 9 8 29 29 C 1.37717 * 119.67624 * 65.01750 * 4 2 1 30 30 H 0.96705 * 114.00075 * 300.00543 * 1 2 3 31 31 H 1.09000 * 109.47081 * 239.99819 * 2 1 3 32 32 H 1.48497 * 110.00331 * 178.68239 * 3 2 1 33 33 H 1.48504 * 109.99715 * 300.00020 * 3 2 1 34 34 H 1.08004 * 119.68716 * 0.04481 * 5 4 2 35 35 H 1.08001 * 120.08770 * 180.02562 * 6 5 4 36 36 H 1.08003 * 126.13527 * 359.95851 * 8 7 6 37 37 H 0.96994 * 120.00197 * 0.02562 * 12 10 9 38 38 H 1.09004 * 113.61035 * 334.55662 * 15 13 12 39 39 H 1.09004 * 113.61754 * 203.66519 * 15 13 12 40 40 H 1.08002 * 120.02796 * 179.97438 * 21 19 18 41 41 H 1.08002 * 119.98920 * 179.77001 * 24 22 21 42 42 H 1.07993 * 119.97551 * 180.26033 * 25 24 22 43 43 H 1.09003 * 113.61512 * 156.34228 * 26 13 12 44 44 H 1.09000 * 113.69040 * 25.44188 * 26 13 12 45 45 H 0.97002 * 125.60894 * 180.23824 * 27 9 8 46 46 H 1.08004 * 120.09085 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6415 -0.0024 2.1916 6 6 3.1057 -0.6265 3.3129 7 6 2.8660 -1.9939 3.4989 8 6 3.1990 -2.9087 4.5271 9 6 2.7061 -4.1247 4.1747 10 6 2.8345 -5.3582 4.9650 11 8 3.4269 -5.3410 6.0274 12 7 2.2957 -6.5077 4.5124 13 6 2.4232 -7.7363 5.3000 14 1 3.2768 -7.7183 5.9775 15 6 1.1114 -8.1772 5.9705 16 6 0.8124 -8.9681 4.6862 17 1 0.2770 -8.3919 3.9315 18 6 0.1935 -10.3187 4.9391 19 6 -0.7866 -10.8012 4.0885 20 9 -1.1888 -10.0610 3.0323 21 6 -1.3545 -12.0421 4.3209 22 6 -0.9383 -12.8012 5.4008 23 9 -1.4885 -14.0143 5.6261 24 6 0.0384 -12.3143 6.2534 25 6 0.6050 -11.0756 6.0201 26 6 2.3323 -9.0200 4.4580 27 7 2.0598 -4.0165 2.9585 28 6 2.1464 -2.7145 2.5253 29 6 1.6822 -2.0553 1.3908 30 1 -0.3933 0.4418 0.7650 31 1 1.7923 -0.5139 -0.8900 32 1 3.5346 1.7703 0.0321 33 1 1.5615 2.4679 -1.2085 34 1 2.8276 1.0521 2.0504 35 1 3.6565 -0.0676 4.0549 36 1 3.7487 -2.6811 5.4286 37 1 1.8237 -6.5215 3.6652 38 1 0.4160 -7.3573 6.1503 39 1 1.2594 -8.8078 6.8472 40 1 -2.1194 -12.4191 3.6581 41 1 0.3607 -12.9048 7.0983 42 1 1.3695 -10.6985 6.6831 43 1 2.8141 -9.8811 4.9212 44 1 2.6224 -8.8820 3.4164 45 1 1.6180 -4.7403 2.4874 46 1 1.1297 -2.5972 0.6374 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:06:44 Heat of formation + Delta-G solvation = -38.417300 kcal Electronic energy + Delta-G solvation = -33307.399637 eV Core-core repulsion = 28379.850603 eV Total energy + Delta-G solvation = -4927.549035 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.128 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.11951 -50.04717 -42.75141 -41.62143 -40.25391 -39.13247 -38.65288 -36.91968 -34.81763 -33.30553 -32.07269 -31.75216 -30.95083 -30.44514 -27.31630 -27.00382 -26.17940 -24.71817 -24.20599 -23.29241 -22.90453 -22.05080 -21.32644 -20.51913 -19.70340 -19.33097 -18.49518 -18.30608 -17.89477 -17.39845 -17.12120 -17.08991 -16.86218 -16.62055 -16.47252 -16.37741 -16.19740 -15.81327 -15.60388 -15.56179 -15.41718 -15.26795 -15.02347 -14.84166 -14.64768 -14.50670 -14.16228 -14.06868 -13.95119 -13.73314 -13.62575 -13.17622 -12.98546 -12.70948 -12.59760 -12.57379 -12.28346 -12.00682 -11.94911 -11.68791 -11.55125 -11.32814 -10.96205 -10.47669 -10.36651 -10.21754 -9.71077 -9.35791 -8.86258 -5.02166 -0.38037 -0.23850 -0.16035 0.49056 0.95832 1.27614 1.64868 1.69464 1.82167 1.99070 2.14097 2.19745 2.72503 2.74604 3.09351 3.28356 3.31811 3.37483 3.41240 3.47182 3.52150 3.61165 3.64418 3.67844 3.73948 3.85006 3.97493 3.99906 4.20437 4.25463 4.35652 4.40243 4.43356 4.44868 4.52497 4.56133 4.61364 4.65324 4.69739 4.76181 4.78271 4.84789 4.86224 4.90917 4.93341 5.05776 5.24906 5.34766 5.37587 5.49566 5.57588 5.59827 5.92908 6.12845 6.28177 6.54358 6.91605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.690 3.310 4 C -0.087 4.087 5 C -0.145 4.145 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.012 3.988 10 C 0.589 3.411 11 O -0.514 6.514 12 N -0.713 5.713 13 C 0.121 3.879 14 H 0.113 0.887 15 C -0.142 4.142 16 C -0.076 4.076 17 H 0.102 0.898 18 C -0.116 4.116 19 C 0.133 3.867 20 F -0.129 7.129 21 C -0.190 4.190 22 C 0.128 3.872 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.134 4.134 27 N -0.579 5.579 28 C 0.116 3.884 29 C -0.104 4.104 30 H 0.380 0.620 31 H 0.113 0.887 32 H -0.257 1.257 33 H -0.256 1.256 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.159 0.841 37 H 0.397 0.603 38 H 0.079 0.921 39 H 0.100 0.900 40 H 0.149 0.851 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.103 0.897 44 H 0.079 0.921 45 H 0.417 0.583 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.224 0.456 0.866 1.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.592 3.408 4 C -0.089 4.089 5 C -0.163 4.163 6 C -0.069 4.069 7 C -0.122 4.122 8 C -0.124 4.124 9 C -0.097 4.097 10 C 0.376 3.624 11 O -0.388 6.388 12 N -0.364 5.364 13 C 0.016 3.984 14 H 0.131 0.869 15 C -0.180 4.180 16 C -0.094 4.094 17 H 0.120 0.880 18 C -0.117 4.117 19 C 0.114 3.886 20 F -0.108 7.108 21 C -0.209 4.209 22 C 0.109 3.891 23 F -0.108 7.108 24 C -0.177 4.177 25 C -0.078 4.078 26 C -0.172 4.172 27 N -0.184 5.184 28 C 0.006 3.994 29 C -0.125 4.125 30 H 0.227 0.773 31 H 0.131 0.869 32 H -0.182 1.182 33 H -0.181 1.181 34 H 0.147 0.853 35 H 0.151 0.849 36 H 0.177 0.823 37 H 0.231 0.769 38 H 0.097 0.903 39 H 0.118 0.882 40 H 0.167 0.833 41 H 0.163 0.837 42 H 0.164 0.836 43 H 0.122 0.878 44 H 0.098 0.902 45 H 0.255 0.745 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.707 0.561 0.620 1.095 hybrid contribution -0.767 -1.340 -1.114 1.904 sum -0.060 -0.779 -0.494 0.924 Atomic orbital electron populations 1.86507 1.17035 1.81721 1.49321 1.25081 0.85270 1.10302 0.97261 0.94605 0.81191 0.77899 0.87075 1.20043 0.98704 0.93548 0.96654 1.20468 1.01519 0.99393 0.94923 1.20386 0.97481 0.91954 0.97050 1.18225 1.03756 0.94402 0.95784 1.20986 1.01866 0.89838 0.99736 1.20046 1.05130 0.95857 0.88697 1.17175 0.78642 0.81707 0.84889 1.90886 1.41606 1.84763 1.21555 1.45555 1.57738 1.08512 1.24561 1.21879 0.99510 0.82891 0.94141 0.86911 1.23592 0.97579 1.00052 0.96818 1.21558 0.95893 0.92294 0.99658 0.87981 1.19774 0.97769 0.97853 0.96284 1.17139 0.95752 0.89704 0.86044 1.91527 1.89417 1.75800 1.54021 1.21087 1.04567 0.94852 1.00422 1.17346 0.94751 0.81611 0.95412 1.91563 1.84121 1.40984 1.94122 1.21267 0.97781 0.97685 1.01006 1.20778 0.98591 0.92561 0.95834 1.23462 0.94569 0.97721 1.01494 1.41893 1.48960 1.08996 1.18514 1.18309 1.00614 0.83914 0.96549 1.19872 1.02682 0.93904 0.96004 0.77268 0.86938 1.18152 1.18089 0.85296 0.84940 0.82321 0.76894 0.90275 0.88156 0.83282 0.83688 0.83627 0.87831 0.90225 0.74505 0.85575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.12 12.83 -35.23 -0.45 -0.33 16 2 C -0.07 0.05 2.79 36.00 0.10 0.15 16 3 Si 0.69 -0.95 29.76 -169.99 -5.06 -6.01 16 4 C -0.09 0.02 5.36 -104.57 -0.56 -0.54 16 5 C -0.14 0.11 8.59 -39.97 -0.34 -0.24 16 6 C -0.05 0.01 10.06 -39.54 -0.40 -0.39 16 7 C -0.12 -0.14 6.16 -106.93 -0.66 -0.80 16 8 C -0.10 -0.14 10.53 -39.15 -0.41 -0.55 16 9 C 0.01 0.01 6.96 -82.29 -0.57 -0.56 16 10 C 0.59 0.70 7.80 -12.68 -0.10 0.60 16 11 O -0.51 -2.42 16.44 5.24 0.09 -2.34 16 12 N -0.71 1.37 5.26 -54.20 -0.29 1.09 16 13 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 14 H 0.11 -0.10 7.46 -51.93 -0.39 -0.49 16 15 C -0.14 0.39 7.25 -25.92 -0.19 0.20 16 16 C -0.08 0.21 3.78 -90.97 -0.34 -0.13 16 17 H 0.10 -0.28 7.44 -51.93 -0.39 -0.67 16 18 C -0.12 0.18 5.29 -104.55 -0.55 -0.38 16 19 C 0.13 0.00 7.24 -39.43 -0.29 -0.29 16 20 F -0.13 -0.11 16.36 2.25 0.04 -0.07 16 21 C -0.19 -0.01 10.01 -39.45 -0.39 -0.40 16 22 C 0.13 0.02 7.30 -39.43 -0.29 -0.26 16 23 F -0.13 -0.20 17.27 2.25 0.04 -0.17 16 24 C -0.16 0.24 10.02 -39.51 -0.40 -0.15 16 25 C -0.06 0.15 8.61 -39.60 -0.34 -0.19 16 26 C -0.13 0.47 7.29 -25.91 -0.19 0.29 16 27 N -0.58 0.60 6.07 -7.36 -0.04 0.56 16 28 C 0.12 0.08 7.25 -83.97 -0.61 -0.53 16 29 C -0.10 -0.02 9.69 -39.42 -0.38 -0.40 16 30 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 31 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 32 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 33 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 34 H 0.13 -0.36 4.85 -52.48 -0.25 -0.61 16 35 H 0.13 -0.28 8.06 -52.49 -0.42 -0.71 16 36 H 0.16 0.12 8.06 -52.48 -0.42 -0.31 16 37 H 0.40 -1.70 7.76 -40.82 -0.32 -2.01 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.10 -0.37 6.31 -51.93 -0.33 -0.69 16 40 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.15 -0.46 8.06 -52.49 -0.42 -0.88 16 42 H 0.15 -0.69 6.65 -52.49 -0.35 -1.04 16 43 H 0.10 -0.43 7.72 -51.93 -0.40 -0.83 16 44 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 45 H 0.42 -1.66 8.12 -40.82 -0.33 -1.99 16 46 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 LS Contribution 394.06 15.07 5.94 5.94 Total: 0.00 -8.71 394.06 -11.87 -20.59 By element: Atomic # 1 Polarization: -9.18 SS G_CDS: -4.93 Total: -14.11 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -7.20 Total: -5.15 kcal Atomic # 7 Polarization: 1.97 SS G_CDS: -0.33 Total: 1.64 kcal Atomic # 8 Polarization: -2.30 SS G_CDS: -0.37 Total: -2.67 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.08 Total: -0.24 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.06 Total: -6.01 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -8.71 -11.87 -20.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.828 kcal (2) G-P(sol) polarization free energy of solvation -8.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.589 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds