Wall clock time and date at job start Sun Mar 7 2021 00:07:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47342 * 2 1 4 4 C 1.50706 * 109.46772 * 120.00089 * 2 1 3 5 5 C 1.38558 * 120.31824 * 245.00038 * 4 2 1 6 6 N 1.31523 * 120.90180 * 179.97438 * 5 4 2 7 7 C 1.32716 * 121.64153 * 359.97438 * 6 5 4 8 8 C 1.48169 * 119.72456 * 179.97438 * 7 6 5 9 9 O 1.21519 * 120.00173 * 179.97438 * 8 7 6 10 10 N 1.34781 * 120.00027 * 0.02562 * 8 7 6 11 11 C 1.46498 * 120.00034 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.84964 * 334.65901 * 11 10 8 13 13 C 1.53777 * 113.61644 * 105.86124 * 11 10 8 14 14 C 1.54043 * 86.98756 * 89.15975 * 13 11 10 15 15 H 1.09004 * 113.61438 * 270.88311 * 14 13 11 16 16 C 1.50702 * 113.69566 * 139.98997 * 14 13 11 17 17 C 1.38188 * 119.98767 * 322.46570 * 16 14 13 18 18 C 1.38226 * 120.04829 * 180.02562 * 17 16 14 19 19 C 1.38455 * 120.02761 * 359.97438 * 18 17 16 20 20 F 1.35099 * 120.01355 * 179.97438 * 19 18 17 21 21 C 1.38438 * 119.97297 * 0.02562 * 19 18 17 22 22 C 1.38400 * 119.95086 * 359.76780 * 21 19 18 23 23 F 1.35097 * 120.01453 * 180.22676 * 22 21 19 24 24 C 1.53782 * 87.07879 * 25.43279 * 14 13 11 25 25 C 1.39308 * 120.55746 * 0.02562 * 7 6 5 26 26 C 1.38599 * 119.05321 * 359.74792 * 25 7 6 27 27 H 0.96697 * 114.00254 * 300.00272 * 1 2 3 28 28 H 1.09003 * 109.47547 * 239.99589 * 2 1 3 29 29 H 1.48500 * 109.99906 * 299.99718 * 3 2 1 30 30 H 1.48504 * 110.00131 * 61.31350 * 3 2 1 31 31 H 1.07997 * 119.55148 * 359.97438 * 5 4 2 32 32 H 0.96996 * 119.99589 * 359.97438 * 10 8 7 33 33 H 1.09000 * 113.61460 * 203.66462 * 13 11 10 34 34 H 1.09003 * 113.61510 * 334.56154 * 13 11 10 35 35 H 1.07996 * 119.97127 * 359.97438 * 17 16 14 36 36 H 1.07999 * 119.98902 * 180.02562 * 18 17 16 37 37 H 1.08004 * 120.02561 * 179.97438 * 21 19 18 38 38 H 1.08996 * 113.61519 * 220.02602 * 24 14 13 39 39 H 1.08992 * 113.68985 * 89.13078 * 24 14 13 40 40 H 1.07997 * 120.47387 * 179.97438 * 25 7 6 41 41 H 1.08002 * 120.74983 * 180.27368 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6409 -0.0172 2.1978 6 7 3.0841 -0.6256 3.2763 7 6 2.8718 -1.9193 3.4828 8 6 3.3909 -2.5619 4.7128 9 8 3.1990 -3.7460 4.9072 10 7 4.0752 -1.8328 5.6166 11 6 4.5880 -2.4680 6.8331 12 1 4.0201 -3.3531 7.1201 13 6 6.1095 -2.6906 6.8174 14 6 6.2397 -1.2844 7.4328 15 1 6.3098 -0.4882 6.6917 16 6 7.2997 -1.1860 8.4995 17 6 7.4972 -2.2359 9.3760 18 6 8.4687 -2.1467 10.3551 19 6 9.2456 -1.0052 10.4584 20 9 10.1947 -0.9182 11.4159 21 6 9.0486 0.0472 9.5809 22 6 8.0784 -0.0449 8.5981 23 9 7.8882 0.9795 7.7382 24 6 4.8206 -1.4832 7.9911 25 6 2.1658 -2.6785 2.5523 26 6 1.6827 -2.0625 1.4085 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 1.5616 2.4678 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.8328 1.0372 2.0643 32 1 4.2280 -0.8876 5.4616 33 1 6.4407 -3.4898 7.4805 34 1 6.5288 -2.7704 5.8144 35 1 6.8914 -3.1264 9.2963 36 1 8.6226 -2.9680 11.0394 37 1 9.6538 0.9381 9.6609 38 1 4.2001 -0.5889 7.9350 39 1 4.7987 -1.9526 8.9745 40 1 1.9941 -3.7312 2.7215 41 1 1.1281 -2.6240 0.6712 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:05 Heat of formation + Delta-G solvation = -59.881423 kcal Electronic energy + Delta-G solvation = -28685.668906 eV Core-core repulsion = 24169.179017 eV Total energy + Delta-G solvation = -4516.489889 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.112 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -50.02912 -49.98777 -42.01770 -41.30424 -40.01968 -38.73437 -38.06690 -34.80174 -33.70655 -33.01823 -31.94377 -31.46833 -28.05597 -26.88988 -26.22470 -25.11264 -24.47487 -23.90705 -22.89543 -22.03456 -20.34675 -19.50789 -19.17447 -18.78670 -18.22917 -17.84213 -17.36397 -17.01492 -16.87994 -16.71598 -16.58742 -16.49745 -16.31204 -16.15126 -16.10010 -15.54318 -15.42334 -15.31232 -14.91404 -14.55200 -14.45823 -14.34972 -14.02421 -13.83399 -13.61759 -13.56574 -13.50876 -12.88135 -12.74466 -12.63453 -12.19133 -12.15025 -11.83720 -11.45103 -11.33353 -11.13770 -10.81607 -10.68609 -10.40240 -10.17666 -10.08815 -9.63127 -5.12709 -0.62184 -0.16395 -0.08966 0.01292 1.05913 1.42013 1.57236 1.81284 1.90422 2.21923 2.64138 2.79868 2.88474 3.14236 3.20586 3.37404 3.38194 3.41071 3.50907 3.56518 3.60043 3.67490 3.74596 3.81543 3.86625 3.96876 4.08257 4.09094 4.30892 4.48132 4.49259 4.54589 4.63100 4.68144 4.73014 4.78829 4.81779 4.85223 4.88566 4.91659 4.98079 4.99089 5.18456 5.30845 5.47722 5.67095 6.17376 6.27510 6.57826 7.08352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.148 4.148 5 C 0.102 3.898 6 N -0.453 5.453 7 C 0.080 3.920 8 C 0.576 3.424 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.109 0.891 13 C -0.142 4.142 14 C -0.075 4.075 15 H 0.105 0.895 16 C -0.114 4.114 17 C -0.060 4.060 18 C -0.159 4.159 19 C 0.127 3.873 20 F -0.130 7.130 21 C -0.190 4.190 22 C 0.134 3.866 23 F -0.128 7.128 24 C -0.134 4.134 25 C -0.107 4.107 26 C -0.052 4.052 27 H 0.378 0.622 28 H 0.125 0.875 29 H -0.251 1.251 30 H -0.255 1.255 31 H 0.165 0.835 32 H 0.413 0.587 33 H 0.098 0.902 34 H 0.078 0.922 35 H 0.146 0.854 36 H 0.144 0.856 37 H 0.149 0.851 38 H 0.081 0.919 39 H 0.102 0.898 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.449 0.873 -0.822 1.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.587 3.413 4 C -0.150 4.150 5 C -0.057 4.057 6 N -0.164 5.164 7 C -0.058 4.058 8 C 0.361 3.639 9 O -0.401 6.401 10 N -0.345 5.345 11 C 0.013 3.987 12 H 0.127 0.873 13 C -0.180 4.180 14 C -0.094 4.094 15 H 0.123 0.877 16 C -0.115 4.115 17 C -0.078 4.078 18 C -0.178 4.178 19 C 0.108 3.892 20 F -0.109 7.109 21 C -0.210 4.210 22 C 0.114 3.886 23 F -0.106 7.106 24 C -0.172 4.172 25 C -0.128 4.128 26 C -0.078 4.078 27 H 0.226 0.774 28 H 0.143 0.857 29 H -0.176 1.176 30 H -0.179 1.179 31 H 0.181 0.819 32 H 0.250 0.750 33 H 0.117 0.883 34 H 0.097 0.903 35 H 0.163 0.837 36 H 0.162 0.838 37 H 0.167 0.833 38 H 0.099 0.901 39 H 0.120 0.880 40 H 0.171 0.829 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.691 1.036 -0.559 1.365 hybrid contribution -1.143 0.161 -0.139 1.162 sum -0.452 1.197 -0.698 1.458 Atomic orbital electron populations 1.86641 1.17171 1.79969 1.49396 1.25019 0.84288 1.11354 0.97759 0.94967 0.91424 0.73986 0.80967 1.21588 0.99485 0.95771 0.98156 1.22680 0.94174 1.00050 0.88840 1.67528 1.18193 1.09421 1.21250 1.21140 0.98602 0.90309 0.95728 1.17843 0.77846 0.85923 0.82259 1.90823 1.57918 1.14764 1.76606 1.45500 1.54986 1.13848 1.20202 1.21888 0.94974 0.97377 0.84468 0.87292 1.23626 0.95977 0.96057 1.02347 1.21617 0.92537 0.99466 0.95756 0.87660 1.19804 0.98735 0.93491 0.99504 1.20773 0.96416 0.98086 0.92531 1.21253 0.97341 0.97952 1.01275 1.17339 0.88972 0.94841 0.88096 1.91559 1.61705 1.96476 1.61132 1.21083 1.01682 1.01095 0.97106 1.17145 0.96336 0.85411 0.89672 1.91532 1.94219 1.57101 1.67783 1.23431 0.95151 1.00141 0.98456 1.22232 0.95307 1.02309 0.92962 1.21572 0.95779 0.93743 0.96735 0.77422 0.85699 1.17566 1.17935 0.81862 0.75027 0.88341 0.90286 0.83677 0.83770 0.83310 0.90079 0.87986 0.82929 0.83431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.33 12.84 -35.23 -0.45 -0.12 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -1.92 29.91 -169.99 -5.08 -7.00 16 4 C -0.15 0.22 5.37 -104.36 -0.56 -0.34 16 5 C 0.10 -0.11 9.84 -17.57 -0.17 -0.29 16 6 N -0.45 -0.21 9.54 -9.80 -0.09 -0.30 16 7 C 0.08 0.10 6.75 -83.01 -0.56 -0.46 16 8 C 0.58 1.26 7.81 -12.18 -0.10 1.16 16 9 O -0.53 -2.62 15.94 5.35 0.09 -2.54 16 10 N -0.69 0.11 5.25 -53.86 -0.28 -0.17 16 11 C 0.12 -0.14 4.30 -67.12 -0.29 -0.43 16 12 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 13 C -0.14 0.26 7.27 -25.78 -0.19 0.08 16 14 C -0.08 0.14 3.79 -90.82 -0.34 -0.20 16 15 H 0.11 -0.15 7.44 -51.93 -0.39 -0.54 16 16 C -0.11 0.10 5.30 -104.54 -0.55 -0.45 16 17 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 18 C -0.16 0.18 10.02 -39.51 -0.40 -0.22 16 19 C 0.13 0.07 7.30 -39.43 -0.29 -0.22 16 20 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 21 C -0.19 -0.08 10.01 -39.45 -0.39 -0.47 16 22 C 0.13 0.07 7.24 -39.43 -0.29 -0.22 16 23 F -0.13 -0.18 16.36 2.25 0.04 -0.14 16 24 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 25 C -0.11 -0.04 9.63 -39.05 -0.38 -0.41 16 26 C -0.05 0.05 9.83 -39.31 -0.39 -0.33 16 27 H 0.38 -1.27 8.70 45.56 0.40 -0.87 16 28 H 0.13 -0.39 7.96 -51.93 -0.41 -0.80 16 29 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 30 H -0.25 0.27 7.01 56.52 0.40 0.67 16 31 H 0.16 -0.52 4.86 -52.49 -0.25 -0.78 16 32 H 0.41 -0.52 8.03 -40.82 -0.33 -0.85 16 33 H 0.10 -0.30 6.33 -51.93 -0.33 -0.62 16 34 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.15 -0.61 6.66 -52.49 -0.35 -0.96 16 36 H 0.14 -0.40 8.06 -52.49 -0.42 -0.83 16 37 H 0.15 -0.09 8.06 -52.48 -0.42 -0.52 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.10 -0.35 7.73 -51.93 -0.40 -0.75 16 40 H 0.15 0.00 7.64 -52.49 -0.40 -0.40 16 41 H 0.15 -0.35 8.06 -52.49 -0.42 -0.77 16 LS Contribution 357.71 15.07 5.39 5.39 Total: 0.00 -7.16 357.71 -9.85 -17.01 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -4.17 Total: -9.32 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: -5.32 Total: -2.60 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.38 Total: -0.47 kcal Atomic # 8 Polarization: -2.29 SS G_CDS: -0.37 Total: -2.66 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.35 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: -5.08 Total: -7.00 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.16 -9.85 -17.01 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.870 kcal (2) G-P(sol) polarization free energy of solvation -7.161 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds