Wall clock time and date at job start Sun Mar 7 2021 00:07:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34658 * 124.85331 * 2 1 4 4 C 1.36764 * 108.39895 * 179.97438 * 3 2 1 5 5 C 1.47270 * 126.94056 * 180.02562 * 4 3 2 6 6 O 1.21625 * 119.99914 * 180.02562 * 5 4 3 7 7 N 1.34780 * 119.99914 * 0.02562 * 5 4 3 8 8 C 1.46503 * 119.99537 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.90851 * 336.24795 * 8 7 5 10 10 C 1.53784 * 113.61173 * 107.50315 * 8 7 5 11 11 C 1.53785 * 87.07993 * 89.11444 * 10 8 7 12 12 H 1.09003 * 113.68512 * 270.87147 * 11 10 8 13 13 C 1.50697 * 113.61554 * 139.98123 * 11 10 8 14 14 C 1.38446 * 119.98865 * 142.49672 * 13 11 10 15 15 F 1.35105 * 120.01452 * 0.02562 * 14 13 11 16 16 C 1.38445 * 119.97568 * 180.02562 * 14 13 11 17 17 C 1.38396 * 119.94984 * 359.97438 * 16 14 13 18 18 F 1.35092 * 120.01557 * 179.97438 * 17 16 14 19 19 C 1.38502 * 119.97368 * 359.97438 * 17 16 14 20 20 C 1.38183 * 120.02423 * 0.04419 * 19 17 16 21 21 C 1.53777 * 87.08223 * 25.42904 * 11 10 8 22 22 C 1.46680 * 106.11707 * 0.26234 * 4 3 2 23 23 C 1.34483 * 106.33236 * 359.56703 * 22 4 3 24 24 C 1.50708 * 125.57307 * 180.14239 * 23 22 4 25 25 O 1.42903 * 109.46919 * 150.33949 * 24 23 22 26 26 Si 1.86299 * 109.46871 * 30.34347 * 24 23 22 27 27 H 1.09003 * 109.47229 * 90.02020 * 1 2 3 28 28 H 1.09002 * 109.46804 * 210.02098 * 1 2 3 29 29 H 1.08998 * 109.47090 * 330.02236 * 1 2 3 30 30 H 1.08000 * 125.79784 * 0.02562 * 3 2 1 31 31 H 0.96998 * 119.99989 * 359.97438 * 7 5 4 32 32 H 1.08998 * 113.61276 * 334.56561 * 10 8 7 33 33 H 1.09001 * 113.61231 * 203.66178 * 10 8 7 34 34 H 1.07997 * 120.02404 * 179.73166 * 16 14 13 35 35 H 1.07991 * 119.98797 * 180.02562 * 19 17 16 36 36 H 1.08006 * 119.97672 * 179.97438 * 20 19 17 37 37 H 1.08999 * 113.61212 * 89.11718 * 21 11 10 38 38 H 1.09000 * 113.61635 * 219.93688 * 21 11 10 39 39 H 1.07999 * 126.83518 * 179.73685 * 22 4 3 40 40 H 1.08998 * 109.46839 * 270.34077 * 24 23 22 41 41 H 0.96696 * 113.99856 * 180.02562 * 25 24 23 42 42 H 1.48500 * 110.00179 * 59.99884 * 26 24 23 43 43 H 1.48504 * 109.99498 * 181.31687 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5958 0.0013 6 8 5.8447 1.1129 0.0013 7 7 4.5734 2.9347 0.0020 8 6 5.7495 3.8082 0.0033 9 1 6.6377 3.3232 0.4080 10 6 5.9922 4.5164 -1.3400 11 6 5.0871 5.6452 -0.8187 12 1 4.0307 5.4987 -1.0439 13 6 5.5760 7.0250 -1.1766 14 6 4.6683 8.0160 -1.5093 15 9 3.3444 7.7465 -1.5126 16 6 5.1177 9.2834 -1.8387 17 6 6.4741 9.5583 -1.8344 18 9 6.9142 10.7944 -2.1560 19 6 7.3803 8.5656 -1.5002 20 6 6.9305 7.3008 -1.1720 21 6 5.4821 5.2003 0.5994 22 6 3.5375 -0.7491 -0.0055 23 6 2.2448 -1.1197 0.0006 24 6 1.7398 -2.5397 0.0007 25 8 0.4806 -2.5974 0.6739 26 14 2.9646 -3.6342 0.8797 27 1 -0.3634 -0.0004 -1.0277 28 1 -0.3633 -0.8898 0.5142 29 1 -0.3633 0.8902 0.5135 30 1 1.8767 2.1240 0.0004 31 1 3.6831 3.3198 0.0016 32 1 5.5771 3.9839 -2.1956 33 1 7.0275 4.8218 -1.4918 34 1 4.4106 10.0559 -2.1025 35 1 8.4387 8.7799 -1.4964 36 1 7.6378 6.5272 -0.9120 37 1 6.3779 5.6926 0.9778 38 1 4.6555 5.2212 1.3096 39 1 4.3981 -1.4016 -0.0107 40 1 1.6185 -2.8822 -1.0270 41 1 0.0955 -3.4835 0.7124 42 1 3.1389 -3.1776 2.2819 43 1 2.4935 -5.0424 0.8589 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:10 Heat of formation + Delta-G solvation = -46.570577 kcal Electronic energy + Delta-G solvation = -29437.283656 eV Core-core repulsion = 24894.059490 eV Total energy + Delta-G solvation = -4543.224166 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.03049 -49.97799 -42.40854 -41.39236 -39.85782 -38.52321 -37.95978 -34.44733 -33.70535 -32.02328 -31.76467 -31.08536 -27.74430 -26.81168 -26.54531 -25.87970 -24.40347 -23.70501 -22.75427 -21.04000 -20.51094 -20.15995 -19.31551 -18.65982 -18.51590 -18.19060 -17.45747 -17.00848 -16.87198 -16.77317 -16.59794 -16.52609 -16.30546 -15.92523 -15.58994 -15.53189 -15.45712 -15.25179 -15.06218 -14.65826 -14.36123 -14.04525 -13.88418 -13.79949 -13.58466 -13.54550 -13.36486 -13.21780 -13.09355 -12.80972 -12.60734 -12.58087 -12.10795 -12.01234 -11.74839 -11.34816 -10.90964 -10.74298 -10.15221 -9.97283 -9.61420 -9.51293 -9.14333 -4.93997 -0.14738 -0.07615 0.79504 1.03071 1.49833 1.58139 1.87222 2.04531 2.23571 2.26743 2.69835 2.80969 2.92881 3.25878 3.40135 3.44307 3.59236 3.59252 3.62260 3.78963 3.83683 3.84888 3.87724 3.99322 4.11763 4.19977 4.21807 4.31618 4.48164 4.56181 4.61248 4.67279 4.69939 4.74514 4.80711 4.85383 4.87321 4.95314 4.97261 5.01166 5.03297 5.11207 5.23051 5.63517 5.68612 5.75482 6.03354 6.15092 6.25030 6.67098 7.48695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.422 5.422 3 C 0.049 3.951 4 C -0.227 4.227 5 C 0.596 3.404 6 O -0.539 6.539 7 N -0.716 5.716 8 C 0.125 3.875 9 H 0.109 0.891 10 C -0.143 4.143 11 C -0.076 4.076 12 H 0.102 0.898 13 C -0.113 4.113 14 C 0.132 3.868 15 F -0.129 7.129 16 C -0.190 4.190 17 C 0.126 3.874 18 F -0.130 7.130 19 C -0.159 4.159 20 C -0.060 4.060 21 C -0.135 4.135 22 C -0.133 4.133 23 C 0.024 3.976 24 C -0.050 4.050 25 O -0.542 6.542 26 Si 0.708 3.292 27 H 0.072 0.928 28 H 0.114 0.886 29 H 0.080 0.920 30 H 0.170 0.830 31 H 0.397 0.603 32 H 0.078 0.922 33 H 0.096 0.904 34 H 0.149 0.851 35 H 0.145 0.855 36 H 0.146 0.854 37 H 0.100 0.900 38 H 0.078 0.922 39 H 0.159 0.841 40 H 0.080 0.920 41 H 0.383 0.617 42 H -0.252 1.252 43 H -0.258 1.258 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.822 -1.318 -0.737 3.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.096 5.096 3 C -0.087 4.087 4 C -0.237 4.237 5 C 0.385 3.615 6 O -0.416 6.416 7 N -0.367 5.367 8 C 0.019 3.981 9 H 0.127 0.873 10 C -0.182 4.182 11 C -0.094 4.094 12 H 0.121 0.879 13 C -0.114 4.114 14 C 0.113 3.887 15 F -0.108 7.108 16 C -0.210 4.210 17 C 0.107 3.893 18 F -0.109 7.109 19 C -0.178 4.178 20 C -0.078 4.078 21 C -0.173 4.173 22 C -0.157 4.157 23 C -0.085 4.085 24 C -0.159 4.159 25 O -0.351 6.351 26 Si 0.607 3.393 27 H 0.090 0.910 28 H 0.132 0.868 29 H 0.099 0.901 30 H 0.187 0.813 31 H 0.232 0.768 32 H 0.096 0.904 33 H 0.115 0.885 34 H 0.166 0.834 35 H 0.162 0.838 36 H 0.164 0.836 37 H 0.118 0.882 38 H 0.097 0.903 39 H 0.176 0.824 40 H 0.098 0.902 41 H 0.233 0.767 42 H -0.176 1.176 43 H -0.183 1.183 Dipole moment (debyes) X Y Z Total from point charges -2.186 -1.597 -0.012 2.707 hybrid contribution -2.059 0.470 -0.162 2.118 sum -4.245 -1.126 -0.174 4.395 Atomic orbital electron populations 1.22481 0.76308 1.05935 1.03702 1.43456 1.07123 1.04934 1.54095 1.21919 0.90170 0.91805 1.04838 1.20210 0.91379 0.93788 1.18372 1.17359 0.88082 0.81073 0.74973 1.90784 1.25762 1.75075 1.49956 1.45500 1.08925 1.05639 1.76652 1.21761 0.90063 0.89782 0.96499 0.87318 1.23593 1.00399 0.95724 0.98436 1.21565 1.00649 0.89777 0.97417 0.87943 1.19826 0.93235 0.95539 1.02849 1.17143 0.77836 0.93028 1.00719 1.91524 1.31182 1.94181 1.93891 1.21073 0.95583 0.97554 1.06772 1.17338 0.91699 0.80681 0.99593 1.91555 1.89870 1.39497 1.89965 1.21261 1.00653 0.92820 1.03032 1.20791 0.94353 0.96144 0.96493 1.23450 1.03108 0.95192 0.95592 1.21529 0.94482 0.93109 1.06595 1.19652 0.90215 0.86865 1.11773 1.24458 0.92662 0.97283 1.01461 1.86416 1.34287 1.34693 1.79733 0.94270 0.86269 0.76131 0.82653 0.90982 0.86758 0.90131 0.81312 0.76823 0.90351 0.88523 0.83366 0.83757 0.83608 0.88186 0.90306 0.82377 0.90181 0.76688 1.17596 1.18273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.71 59.85 0.64 0.54 16 2 N -0.42 -0.23 3.09 -119.89 -0.37 -0.60 16 3 C 0.05 0.00 10.83 -16.85 -0.18 -0.18 16 4 C -0.23 -0.51 6.29 -103.35 -0.65 -1.16 16 5 C 0.60 1.89 7.81 -12.59 -0.10 1.79 16 6 O -0.54 -3.71 16.57 5.26 0.09 -3.63 16 7 N -0.72 0.15 5.25 -54.14 -0.28 -0.13 16 8 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 9 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 10 C -0.14 0.21 7.25 -25.92 -0.19 0.03 16 11 C -0.08 0.14 3.78 -90.96 -0.34 -0.21 16 12 H 0.10 -0.18 7.44 -51.93 -0.39 -0.56 16 13 C -0.11 0.08 5.29 -104.55 -0.55 -0.47 16 14 C 0.13 0.08 7.24 -39.43 -0.29 -0.21 16 15 F -0.13 -0.18 16.36 2.25 0.04 -0.14 16 16 C -0.19 -0.10 10.01 -39.45 -0.39 -0.50 16 17 C 0.13 0.09 7.30 -39.43 -0.29 -0.20 16 18 F -0.13 -0.26 17.27 2.25 0.04 -0.22 16 19 C -0.16 0.15 10.03 -39.50 -0.40 -0.25 16 20 C -0.06 0.10 8.60 -39.60 -0.34 -0.24 16 21 C -0.14 0.31 7.29 -25.92 -0.19 0.13 16 22 C -0.13 -0.29 9.50 -37.50 -0.36 -0.65 16 23 C 0.02 0.03 6.16 -81.86 -0.50 -0.47 16 24 C -0.05 0.05 2.97 36.01 0.11 0.15 16 25 O -0.54 0.65 9.69 -35.23 -0.34 0.31 16 26 Si 0.71 -0.71 31.13 -169.99 -5.29 -6.00 16 27 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.11 -0.14 5.13 -51.93 -0.27 -0.40 16 29 H 0.08 -0.27 8.13 -51.93 -0.42 -0.69 16 30 H 0.17 -0.60 7.45 -52.49 -0.39 -0.99 16 31 H 0.40 -1.06 7.64 -40.82 -0.31 -1.37 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 34 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 35 H 0.14 -0.37 8.06 -52.49 -0.42 -0.80 16 36 H 0.15 -0.56 6.66 -52.48 -0.35 -0.91 16 37 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.16 0.15 6.91 -52.49 -0.36 -0.21 16 40 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 41 H 0.38 -1.89 8.74 45.56 0.40 -1.50 16 42 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 43 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 LS Contribution 367.06 15.07 5.53 5.53 Total: 0.00 -9.17 367.06 -9.84 -19.01 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -4.93 Total: -11.84 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -4.31 Total: -2.28 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.65 Total: -0.74 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.25 Total: -3.32 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.08 Total: -0.36 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.29 Total: -6.00 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -9.17 -9.84 -19.01 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.562 kcal (2) G-P(sol) polarization free energy of solvation -9.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds