Wall clock time and date at job start Sun Mar 7 2021 00:07:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38973 * 119.95254 * 2 1 4 4 O 1.35713 * 119.91275 * 359.97438 * 3 2 1 5 5 C 1.39018 * 120.17572 * 180.02562 * 3 2 1 6 6 C 1.50703 * 119.95378 * 179.97438 * 5 3 2 7 7 O 1.42896 * 109.47474 * 75.01817 * 6 5 3 8 8 Si 1.86306 * 109.46896 * 195.01890 * 6 5 3 9 9 C 1.37681 * 120.08822 * 359.97438 * 5 3 2 10 10 C 1.39748 * 119.90986 * 0.02562 * 9 5 3 11 11 C 1.47610 * 120.08589 * 180.02562 * 10 9 5 12 12 O 1.21583 * 119.99757 * 0.02562 * 11 10 9 13 13 N 1.34771 * 119.99802 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99903 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.84849 * 336.19231 * 14 13 11 16 16 C 1.53779 * 113.61746 * 107.50534 * 14 13 11 17 17 C 1.53779 * 87.08402 * 89.11614 * 16 14 13 18 18 H 1.09002 * 113.61557 * 270.88569 * 17 16 14 19 19 C 1.50699 * 113.61429 * 139.98140 * 17 16 14 20 20 C 1.38452 * 119.98287 * 142.50404 * 19 17 16 21 21 F 1.35092 * 120.01596 * 359.97438 * 20 19 17 22 22 C 1.38449 * 119.97261 * 179.97438 * 20 19 17 23 23 C 1.38405 * 119.94762 * 359.97438 * 22 20 19 24 24 F 1.35099 * 120.01121 * 180.02562 * 23 22 20 25 25 C 1.38491 * 119.97237 * 0.02562 * 23 22 20 26 26 C 1.38190 * 120.03048 * 359.74404 * 25 23 22 27 27 C 1.53784 * 87.08045 * 25.43458 * 17 16 14 28 28 C 1.37716 * 119.95938 * 180.30127 * 2 1 3 29 29 H 1.08994 * 109.47121 * 90.00465 * 1 2 3 30 30 H 1.09005 * 109.46509 * 210.00049 * 1 2 3 31 31 H 1.09002 * 109.47241 * 329.99615 * 1 2 3 32 32 H 0.96701 * 114.00007 * 270.02260 * 4 3 2 33 33 H 1.09000 * 109.47074 * 315.01463 * 6 5 3 34 34 H 0.96700 * 114.00039 * 299.99956 * 7 6 5 35 35 H 1.48500 * 109.99794 * 298.67949 * 8 6 5 36 36 H 1.48500 * 109.99877 * 59.99776 * 8 6 5 37 37 H 1.08004 * 120.04348 * 179.97438 * 9 5 3 38 38 H 0.97001 * 120.00748 * 0.02562 * 13 11 10 39 39 H 1.09006 * 113.61280 * 203.66438 * 16 14 13 40 40 H 1.08999 * 113.61062 * 334.48192 * 16 14 13 41 41 H 1.07995 * 120.02456 * 179.97438 * 22 20 19 42 42 H 1.08000 * 119.98477 * 179.97438 * 25 23 22 43 43 H 1.08002 * 119.97873 * 180.25782 * 26 25 23 44 44 H 1.09004 * 113.61451 * 220.02152 * 27 17 16 45 45 H 1.08994 * 113.61477 * 89.11454 * 27 17 16 46 46 H 1.08006 * 120.04760 * 359.97205 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3778 -0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3384 2.5182 -0.0011 7 8 4.2728 3.1049 1.3002 8 14 6.1194 2.2160 -0.4569 9 6 4.2859 0.0209 -0.0005 10 6 3.5919 -1.1920 -0.0005 11 6 4.3330 -2.4686 0.0000 12 8 5.5488 -2.4657 0.0010 13 7 3.6618 -3.6373 -0.0005 14 6 4.3973 -4.9043 0.0006 15 1 5.4050 -4.8091 -0.4037 16 6 4.3385 -5.6496 1.3445 17 6 3.0621 -6.3297 0.8219 18 1 2.1498 -5.7767 1.0456 19 6 2.9658 -7.7901 1.1812 20 6 1.7399 -8.3417 1.5124 21 9 0.6303 -7.5711 1.5141 22 6 1.6516 -9.6836 1.8419 23 6 2.7892 -10.4720 1.8392 24 9 2.7044 -11.7816 2.1600 25 6 4.0143 -9.9178 1.5075 26 6 4.1004 -8.5795 1.1742 27 6 3.6028 -6.0784 -0.5956 28 6 2.1948 -1.1931 -0.0063 29 1 -0.3633 -0.0001 -1.0276 30 1 -0.3632 -0.8900 0.5139 31 1 -0.3634 0.8900 0.5139 32 1 1.3222 2.7176 -0.8841 33 1 3.8872 3.1940 -0.7276 34 1 3.3733 3.2901 1.6032 35 1 6.7549 1.3213 0.5436 36 1 6.2013 1.6059 -1.8084 37 1 5.3660 0.0260 -0.0014 38 1 2.6918 -3.6397 -0.0016 39 1 5.1688 -6.3389 1.4982 40 1 4.1676 -4.9954 2.1994 41 1 0.6959 -10.1147 2.1008 42 1 4.9021 -10.5327 1.5057 43 1 5.0556 -8.1492 0.9116 44 1 2.8366 -5.7704 -1.3071 45 1 4.2320 -6.8848 -0.9722 46 1 1.6549 -2.1285 -0.0107 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:14 Heat of formation + Delta-G solvation = -121.111986 kcal Electronic energy + Delta-G solvation = -33306.820469 eV Core-core repulsion = 28378.881523 eV Total energy + Delta-G solvation = -4927.938946 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.09629 -50.02941 -42.00558 -41.35421 -40.19669 -38.84619 -37.76005 -37.58856 -34.83665 -34.09186 -32.27237 -31.90585 -31.19770 -28.22339 -26.98461 -26.95466 -26.46527 -24.97994 -24.22181 -22.97260 -22.28203 -21.68090 -20.45848 -19.70718 -19.41070 -18.91125 -18.30130 -18.01805 -17.82761 -17.32917 -17.06891 -16.91594 -16.89279 -16.57016 -16.36454 -16.07098 -16.00370 -15.59218 -15.47652 -15.36933 -15.32273 -15.13926 -14.74473 -14.52160 -14.17140 -13.97017 -13.91725 -13.74109 -13.68994 -13.58867 -13.48090 -13.08299 -13.01255 -12.83488 -12.68336 -12.32109 -12.23068 -12.09066 -11.89881 -11.50079 -11.25320 -11.13362 -10.98785 -10.29274 -10.19167 -10.08119 -9.80617 -9.68374 -4.81308 -0.52133 -0.21514 -0.13926 -0.04215 1.35686 1.53680 1.69360 1.87034 2.03884 2.16803 2.46852 2.74676 2.86205 3.13659 3.29770 3.31859 3.34603 3.40069 3.45185 3.50202 3.52442 3.68601 3.76674 3.79784 3.88330 3.90567 4.00731 4.03317 4.17803 4.28076 4.41257 4.42288 4.48727 4.49910 4.51082 4.58908 4.63604 4.68093 4.73259 4.79552 4.82438 4.87443 4.89326 4.93301 4.96681 5.00028 5.11235 5.12757 5.36188 5.43071 5.62044 6.28574 6.33835 6.56504 7.03947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.111 4.111 3 C 0.145 3.855 4 O -0.490 6.490 5 C -0.142 4.142 6 C -0.073 4.073 7 O -0.532 6.532 8 Si 0.740 3.260 9 C -0.051 4.051 10 C -0.135 4.135 11 C 0.564 3.436 12 O -0.529 6.529 13 N -0.709 5.709 14 C 0.120 3.880 15 H 0.110 0.890 16 C -0.143 4.143 17 C -0.075 4.075 18 H 0.103 0.897 19 C -0.115 4.115 20 C 0.133 3.867 21 F -0.129 7.129 22 C -0.190 4.190 23 C 0.128 3.872 24 F -0.130 7.130 25 C -0.159 4.159 26 C -0.060 4.060 27 C -0.134 4.134 28 C -0.068 4.068 29 H 0.074 0.926 30 H 0.072 0.928 31 H 0.078 0.922 32 H 0.397 0.603 33 H 0.074 0.926 34 H 0.369 0.631 35 H -0.247 1.247 36 H -0.247 1.247 37 H 0.141 0.859 38 H 0.401 0.599 39 H 0.099 0.901 40 H 0.078 0.922 41 H 0.149 0.851 42 H 0.145 0.855 43 H 0.146 0.854 44 H 0.080 0.920 45 H 0.102 0.898 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.833 1.422 -3.332 4.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.112 4.112 3 C 0.100 3.900 4 O -0.302 6.302 5 C -0.143 4.143 6 C -0.182 4.182 7 O -0.338 6.338 8 Si 0.638 3.362 9 C -0.070 4.070 10 C -0.138 4.138 11 C 0.352 3.648 12 O -0.405 6.405 13 N -0.361 5.361 14 C 0.014 3.986 15 H 0.128 0.872 16 C -0.181 4.181 17 C -0.094 4.094 18 H 0.121 0.879 19 C -0.116 4.116 20 C 0.114 3.886 21 F -0.107 7.107 22 C -0.209 4.209 23 C 0.108 3.892 24 F -0.108 7.108 25 C -0.178 4.178 26 C -0.078 4.078 27 C -0.172 4.172 28 C -0.087 4.087 29 H 0.093 0.907 30 H 0.091 0.909 31 H 0.097 0.903 32 H 0.255 0.745 33 H 0.092 0.908 34 H 0.217 0.783 35 H -0.172 1.172 36 H -0.172 1.172 37 H 0.158 0.842 38 H 0.237 0.763 39 H 0.117 0.883 40 H 0.097 0.903 41 H 0.167 0.833 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.098 0.902 45 H 0.121 0.879 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.741 0.697 -2.973 3.143 hybrid contribution -2.662 -0.807 -0.114 2.784 sum -3.403 -0.109 -3.087 4.596 Atomic orbital electron populations 1.20751 0.89488 1.03985 1.02912 1.20195 0.97378 0.91983 1.01612 1.18301 0.88618 0.85377 0.97696 1.84709 1.75757 1.35731 1.33957 1.20685 0.93543 0.96435 1.03591 1.25172 1.13226 0.90919 0.88873 1.86736 1.32999 1.82519 1.31534 0.93223 0.76593 0.86827 0.79512 1.21011 1.00383 0.90452 0.95129 1.19824 0.93561 0.93334 1.07106 1.18123 0.87229 0.83512 0.75941 1.90819 1.13305 1.87422 1.48996 1.45558 1.10126 1.04903 1.75470 1.21868 0.97449 0.82202 0.97047 0.87159 1.23592 0.97192 0.99230 0.98101 1.21559 0.99717 0.90859 0.97229 0.87877 1.19783 0.91870 0.96809 1.03148 1.17136 0.82672 0.88177 1.00639 1.91523 1.50801 1.74534 1.93873 1.21086 1.00084 0.93070 1.06693 1.17341 0.93862 0.78506 0.99454 1.91562 1.96992 1.32299 1.89957 1.21261 0.97071 0.96432 1.02987 1.20777 0.98329 0.92154 0.96521 1.23454 1.00121 0.97885 0.95736 1.21105 0.92452 0.97961 0.97207 0.90728 0.90930 0.90277 0.74509 0.90793 0.78254 1.17187 1.17169 0.84194 0.76292 0.88279 0.90307 0.83283 0.83714 0.83668 0.90168 0.87925 0.84878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.29 9.78 36.01 0.35 0.64 16 2 C -0.11 0.06 5.89 -104.54 -0.62 -0.56 16 3 C 0.15 0.02 6.62 -39.02 -0.26 -0.24 16 4 O -0.49 0.86 11.41 -18.84 -0.22 0.65 16 5 C -0.14 -0.24 5.27 -104.53 -0.55 -0.79 16 6 C -0.07 -0.05 2.33 36.01 0.08 0.03 16 7 O -0.53 -1.01 12.65 -35.23 -0.45 -1.45 16 8 Si 0.74 0.61 30.40 -169.99 -5.17 -4.56 16 9 C -0.05 -0.17 8.20 -39.22 -0.32 -0.49 16 10 C -0.14 -0.27 5.87 -104.96 -0.62 -0.88 16 11 C 0.56 1.59 7.76 -12.44 -0.10 1.49 16 12 O -0.53 -3.50 15.94 5.29 0.08 -3.42 16 13 N -0.71 0.45 5.21 -54.03 -0.28 0.17 16 14 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 15 H 0.11 0.03 7.46 -51.93 -0.39 -0.36 16 16 C -0.14 0.25 7.25 -25.92 -0.19 0.06 16 17 C -0.08 0.16 3.78 -90.96 -0.34 -0.18 16 18 H 0.10 -0.22 7.45 -51.93 -0.39 -0.60 16 19 C -0.12 0.12 5.30 -104.55 -0.55 -0.43 16 20 C 0.13 0.04 7.24 -39.42 -0.29 -0.24 16 21 F -0.13 -0.14 16.36 2.25 0.04 -0.10 16 22 C -0.19 -0.06 10.01 -39.44 -0.39 -0.45 16 23 C 0.13 0.06 7.30 -39.43 -0.29 -0.23 16 24 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 25 C -0.16 0.18 10.02 -39.51 -0.40 -0.21 16 26 C -0.06 0.12 8.59 -39.60 -0.34 -0.22 16 27 C -0.13 0.38 7.29 -25.91 -0.19 0.19 16 28 C -0.07 0.04 9.18 -39.22 -0.36 -0.32 16 29 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.07 -0.23 8.09 -51.93 -0.42 -0.65 16 31 H 0.08 -0.16 7.52 -51.93 -0.39 -0.55 16 32 H 0.40 -2.32 9.06 45.56 0.41 -1.91 16 33 H 0.07 -0.11 7.82 -51.93 -0.41 -0.52 16 34 H 0.37 -0.03 8.60 45.56 0.39 0.36 16 35 H -0.25 -1.04 6.81 56.52 0.38 -0.65 16 36 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 37 H 0.14 0.64 4.51 -52.48 -0.24 0.40 16 38 H 0.40 -1.25 6.72 -40.82 -0.27 -1.53 16 39 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 40 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 42 H 0.15 -0.40 8.06 -52.49 -0.42 -0.83 16 43 H 0.15 -0.60 6.67 -52.49 -0.35 -0.95 16 44 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.10 -0.36 7.71 -51.93 -0.40 -0.76 16 46 H 0.13 -0.47 6.39 -52.48 -0.34 -0.81 16 LS Contribution 390.04 15.07 5.88 5.88 Total: 0.00 -8.60 390.04 -10.16 -18.76 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -4.44 Total: -12.47 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -5.65 Total: -3.25 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.28 Total: 0.17 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -0.58 Total: -4.22 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.08 Total: -0.30 kcal Atomic # 14 Polarization: 0.61 SS G_CDS: -5.17 Total: -4.56 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -8.60 -10.16 -18.76 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.351 kcal (2) G-P(sol) polarization free energy of solvation -8.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.164 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds