Wall clock time and date at job start Sun Mar 7 2021 00:07:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38973 * 119.95254 * 2 1 4 4 O 1.35713 * 119.91275 * 359.97438 * 3 2 1 5 5 C 1.39018 * 120.17572 * 180.02562 * 3 2 1 6 6 C 1.50703 * 119.95378 * 179.97438 * 5 3 2 7 7 O 1.42896 * 109.47474 * 75.01817 * 6 5 3 8 8 Si 1.86306 * 109.46896 * 195.01890 * 6 5 3 9 9 C 1.37681 * 120.08822 * 359.97438 * 5 3 2 10 10 C 1.39748 * 119.90986 * 0.02562 * 9 5 3 11 11 C 1.47610 * 120.08589 * 180.02562 * 10 9 5 12 12 O 1.21583 * 119.99757 * 0.02562 * 11 10 9 13 13 N 1.34771 * 119.99802 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99903 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.84849 * 336.19231 * 14 13 11 16 16 C 1.53779 * 113.61746 * 107.50534 * 14 13 11 17 17 C 1.53779 * 87.08402 * 89.11614 * 16 14 13 18 18 H 1.09002 * 113.61557 * 270.88569 * 17 16 14 19 19 C 1.50699 * 113.61429 * 139.98140 * 17 16 14 20 20 C 1.38452 * 119.98287 * 142.50404 * 19 17 16 21 21 F 1.35092 * 120.01596 * 359.97438 * 20 19 17 22 22 C 1.38449 * 119.97261 * 179.97438 * 20 19 17 23 23 C 1.38405 * 119.94762 * 359.97438 * 22 20 19 24 24 F 1.35099 * 120.01121 * 180.02562 * 23 22 20 25 25 C 1.38491 * 119.97237 * 0.02562 * 23 22 20 26 26 C 1.38190 * 120.03048 * 359.74404 * 25 23 22 27 27 C 1.53784 * 87.08045 * 25.43458 * 17 16 14 28 28 C 1.37716 * 119.95938 * 180.30127 * 2 1 3 29 29 H 1.08994 * 109.47121 * 90.00465 * 1 2 3 30 30 H 1.09005 * 109.46509 * 210.00049 * 1 2 3 31 31 H 1.09002 * 109.47241 * 329.99615 * 1 2 3 32 32 H 0.96701 * 114.00007 * 270.02260 * 4 3 2 33 33 H 1.09000 * 109.47074 * 315.01463 * 6 5 3 34 34 H 0.96700 * 114.00039 * 299.99956 * 7 6 5 35 35 H 1.48500 * 109.99794 * 298.67949 * 8 6 5 36 36 H 1.48500 * 109.99877 * 59.99776 * 8 6 5 37 37 H 1.08004 * 120.04348 * 179.97438 * 9 5 3 38 38 H 0.97001 * 120.00748 * 0.02562 * 13 11 10 39 39 H 1.09006 * 113.61280 * 203.66438 * 16 14 13 40 40 H 1.08999 * 113.61062 * 334.48192 * 16 14 13 41 41 H 1.07995 * 120.02456 * 179.97438 * 22 20 19 42 42 H 1.08000 * 119.98477 * 179.97438 * 25 23 22 43 43 H 1.08002 * 119.97873 * 180.25782 * 26 25 23 44 44 H 1.09004 * 113.61451 * 220.02152 * 27 17 16 45 45 H 1.08994 * 113.61477 * 89.11454 * 27 17 16 46 46 H 1.08006 * 120.04760 * 359.97205 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3778 -0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3384 2.5182 -0.0011 7 8 4.2728 3.1049 1.3002 8 14 6.1194 2.2160 -0.4569 9 6 4.2859 0.0209 -0.0005 10 6 3.5919 -1.1920 -0.0005 11 6 4.3330 -2.4686 0.0000 12 8 5.5488 -2.4657 0.0010 13 7 3.6618 -3.6373 -0.0005 14 6 4.3973 -4.9043 0.0006 15 1 5.4050 -4.8091 -0.4037 16 6 4.3385 -5.6496 1.3445 17 6 3.0621 -6.3297 0.8219 18 1 2.1498 -5.7767 1.0456 19 6 2.9658 -7.7901 1.1812 20 6 1.7399 -8.3417 1.5124 21 9 0.6303 -7.5711 1.5141 22 6 1.6516 -9.6836 1.8419 23 6 2.7892 -10.4720 1.8392 24 9 2.7044 -11.7816 2.1600 25 6 4.0143 -9.9178 1.5075 26 6 4.1004 -8.5795 1.1742 27 6 3.6028 -6.0784 -0.5956 28 6 2.1948 -1.1931 -0.0063 29 1 -0.3633 -0.0001 -1.0276 30 1 -0.3632 -0.8900 0.5139 31 1 -0.3634 0.8900 0.5139 32 1 1.3222 2.7176 -0.8841 33 1 3.8872 3.1940 -0.7276 34 1 3.3733 3.2901 1.6032 35 1 6.7549 1.3213 0.5436 36 1 6.2013 1.6059 -1.8084 37 1 5.3660 0.0260 -0.0014 38 1 2.6918 -3.6397 -0.0016 39 1 5.1688 -6.3389 1.4982 40 1 4.1676 -4.9954 2.1994 41 1 0.6959 -10.1147 2.1008 42 1 4.9021 -10.5327 1.5057 43 1 5.0556 -8.1492 0.9116 44 1 2.8366 -5.7704 -1.3071 45 1 4.2320 -6.8848 -0.9722 46 1 1.6549 -2.1285 -0.0107 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:12 Heat of formation + Delta-G solvation = -119.929678 kcal Electronic energy + Delta-G solvation = -33306.769200 eV Core-core repulsion = 28378.881523 eV Total energy + Delta-G solvation = -4927.887677 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -50.10453 -50.07113 -42.03451 -41.29228 -40.24396 -38.81177 -37.76283 -37.62947 -34.91547 -34.07671 -32.25170 -31.83400 -31.16270 -28.11199 -27.01630 -26.79678 -26.41817 -24.98284 -24.17403 -22.92628 -22.27345 -21.74013 -20.39664 -19.63548 -19.39577 -18.96847 -18.28368 -18.06238 -17.84710 -17.26887 -17.07956 -16.87294 -16.84512 -16.56373 -16.40386 -16.21327 -16.07579 -15.57846 -15.50294 -15.37349 -15.28415 -15.18849 -14.75165 -14.34956 -14.08833 -13.94832 -13.82616 -13.78080 -13.59377 -13.51690 -13.42175 -13.01347 -12.92113 -12.83977 -12.59651 -12.40523 -12.27735 -12.11869 -11.81136 -11.42557 -11.36726 -11.18773 -11.09517 -10.34865 -10.13214 -10.08804 -9.79571 -9.63229 -4.94790 -0.56145 -0.16068 -0.07889 -0.06449 1.24770 1.44036 1.54722 1.84246 1.91220 2.24584 2.40706 2.79089 2.95086 3.23993 3.30241 3.39788 3.40744 3.45234 3.47570 3.58927 3.62380 3.78334 3.81391 3.89368 3.90962 3.98756 4.03129 4.12981 4.28494 4.31183 4.47535 4.53522 4.59912 4.65696 4.68343 4.75349 4.76471 4.80365 4.84690 4.87622 4.88511 4.94252 4.95856 5.03625 5.04626 5.11495 5.19668 5.20162 5.45521 5.50129 5.69333 6.27420 6.58344 6.62251 6.94632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.113 4.113 3 C 0.155 3.845 4 O -0.490 6.490 5 C -0.155 4.155 6 C -0.073 4.073 7 O -0.547 6.547 8 Si 0.799 3.201 9 C -0.080 4.080 10 C -0.152 4.152 11 C 0.560 3.440 12 O -0.580 6.580 13 N -0.692 5.692 14 C 0.110 3.890 15 H 0.093 0.907 16 C -0.140 4.140 17 C -0.070 4.070 18 H 0.105 0.895 19 C -0.112 4.112 20 C 0.117 3.883 21 F -0.136 7.136 22 C -0.198 4.198 23 C 0.108 3.892 24 F -0.142 7.142 25 C -0.155 4.155 26 C -0.056 4.056 27 C -0.120 4.120 28 C -0.058 4.058 29 H 0.089 0.911 30 H 0.083 0.917 31 H 0.076 0.924 32 H 0.417 0.583 33 H 0.105 0.895 34 H 0.379 0.621 35 H -0.306 1.306 36 H -0.270 1.270 37 H 0.113 0.887 38 H 0.415 0.585 39 H 0.111 0.889 40 H 0.066 0.934 41 H 0.152 0.848 42 H 0.162 0.838 43 H 0.170 0.830 44 H 0.089 0.911 45 H 0.115 0.885 46 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.751 1.702 -4.025 6.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.113 4.113 3 C 0.109 3.891 4 O -0.305 6.305 5 C -0.156 4.156 6 C -0.182 4.182 7 O -0.354 6.354 8 Si 0.704 3.296 9 C -0.099 4.099 10 C -0.155 4.155 11 C 0.349 3.651 12 O -0.461 6.461 13 N -0.343 5.343 14 C 0.005 3.995 15 H 0.112 0.888 16 C -0.178 4.178 17 C -0.089 4.089 18 H 0.123 0.877 19 C -0.113 4.113 20 C 0.098 3.902 21 F -0.115 7.115 22 C -0.217 4.217 23 C 0.089 3.911 24 F -0.121 7.121 25 C -0.174 4.174 26 C -0.074 4.074 27 C -0.158 4.158 28 C -0.076 4.076 29 H 0.108 0.892 30 H 0.102 0.898 31 H 0.095 0.905 32 H 0.279 0.721 33 H 0.123 0.877 34 H 0.228 0.772 35 H -0.234 1.234 36 H -0.196 1.196 37 H 0.130 0.870 38 H 0.254 0.746 39 H 0.129 0.871 40 H 0.085 0.915 41 H 0.169 0.831 42 H 0.179 0.821 43 H 0.188 0.812 44 H 0.107 0.893 45 H 0.133 0.867 46 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -2.715 0.988 -3.690 4.687 hybrid contribution -2.073 -0.931 0.125 2.275 sum -4.788 0.057 -3.565 5.969 Atomic orbital electron populations 1.20797 0.87569 1.04438 1.03975 1.20513 0.98646 0.91563 1.00603 1.18308 0.87973 0.86391 0.96418 1.84666 1.75170 1.34919 1.35720 1.20769 0.94534 0.95973 1.04362 1.25126 1.12513 0.91331 0.89241 1.86701 1.33973 1.82591 1.32139 0.92773 0.75789 0.84974 0.76051 1.20986 0.99411 0.92103 0.97354 1.19843 0.94753 0.92409 1.08483 1.18370 0.86736 0.84631 0.75358 1.90787 1.15429 1.88117 1.51733 1.45456 1.10793 1.04262 1.73817 1.21963 0.97120 0.82381 0.98020 0.88842 1.23603 0.97934 0.99134 0.97126 1.21535 0.99529 0.90179 0.97611 0.87695 1.19939 0.91621 0.97310 1.02432 1.17286 0.82997 0.88221 1.01685 1.91499 1.51265 1.74652 1.94066 1.21175 1.00373 0.93320 1.06875 1.17568 0.94690 0.78172 1.00711 1.91527 1.97098 1.33153 1.90280 1.21514 0.96991 0.96964 1.01894 1.21061 0.99020 0.91707 0.95585 1.23424 0.99951 0.96989 0.95413 1.21393 0.91183 0.99531 0.95523 0.89236 0.89812 0.90516 0.72122 0.87727 0.77193 1.23416 1.19593 0.86969 0.74647 0.87055 0.91518 0.83071 0.82065 0.81233 0.89283 0.86694 0.81782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.85 9.78 71.24 0.70 1.55 16 2 C -0.11 0.29 5.89 -19.81 -0.12 0.18 16 3 C 0.15 -0.10 6.62 22.63 0.15 0.05 16 4 O -0.49 2.69 11.41 -90.34 -1.03 1.66 16 5 C -0.16 -0.62 5.27 -19.81 -0.10 -0.73 16 6 C -0.07 -0.13 2.33 71.24 0.17 0.04 16 7 O -0.55 -2.21 12.65 -148.98 -1.89 -4.10 16 8 Si 0.80 3.25 30.40 68.60 2.09 5.34 16 9 C -0.08 -0.71 8.20 22.50 0.18 -0.52 16 10 C -0.15 -0.80 5.87 -20.08 -0.12 -0.91 16 11 C 0.56 4.17 7.76 86.72 0.67 4.85 16 12 O -0.58 -9.66 15.94 -3.98 -0.06 -9.72 16 13 N -0.69 0.68 5.21 -443.13 -2.31 -1.63 16 14 C 0.11 -0.24 4.32 45.52 0.20 -0.04 16 15 H 0.09 0.17 7.46 -2.39 -0.02 0.15 16 16 C -0.14 0.53 7.25 31.12 0.23 0.76 16 17 C -0.07 0.37 3.78 -11.01 -0.04 0.33 16 18 H 0.10 -0.56 7.45 -2.39 -0.02 -0.58 16 19 C -0.11 0.33 5.30 -19.82 -0.10 0.23 16 20 C 0.12 0.06 7.24 22.37 0.16 0.23 16 21 F -0.14 -0.30 16.36 44.97 0.74 0.44 16 22 C -0.20 -0.22 10.01 22.36 0.22 0.01 16 23 C 0.11 0.13 7.30 22.37 0.16 0.29 16 24 F -0.14 -0.62 17.27 44.97 0.78 0.16 16 25 C -0.15 0.48 10.02 22.32 0.22 0.71 16 26 C -0.06 0.30 8.59 22.26 0.19 0.49 16 27 C -0.12 0.83 7.29 31.12 0.23 1.06 16 28 C -0.06 0.12 9.18 22.50 0.21 0.33 16 29 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 30 H 0.08 -0.79 8.09 -2.38 -0.02 -0.81 16 31 H 0.08 -0.49 7.52 -2.39 -0.02 -0.51 16 32 H 0.42 -5.93 9.06 -74.06 -0.67 -6.60 16 33 H 0.10 -0.46 7.82 -2.39 -0.02 -0.48 16 34 H 0.38 -0.24 8.60 -74.06 -0.64 -0.87 16 35 H -0.31 -4.15 6.81 99.48 0.68 -3.47 16 36 H -0.27 -1.96 7.11 99.48 0.71 -1.26 16 37 H 0.11 1.55 4.51 -2.91 -0.01 1.53 16 38 H 0.41 -2.99 6.72 -92.71 -0.62 -3.61 16 39 H 0.11 -0.71 6.32 -2.38 -0.02 -0.73 16 40 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 42 H 0.16 -1.10 8.06 -2.91 -0.02 -1.13 16 43 H 0.17 -1.78 6.67 -2.91 -0.02 -1.80 16 44 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 45 H 0.11 -1.03 7.71 -2.39 -0.02 -1.05 16 46 H 0.16 -1.53 6.39 -2.91 -0.02 -1.55 16 Total: 0.00 -24.24 390.04 0.69 -23.55 By element: Atomic # 1 Polarization: -23.75 SS G_CDS: -0.83 Total: -24.58 kcal Atomic # 6 Polarization: 5.67 SS G_CDS: 3.20 Total: 8.87 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -2.31 Total: -1.63 kcal Atomic # 8 Polarization: -9.18 SS G_CDS: -2.98 Total: -12.16 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 1.51 Total: 0.60 kcal Atomic # 14 Polarization: 3.25 SS G_CDS: 2.09 Total: 5.34 kcal Total: -24.24 0.69 -23.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.377 kcal (2) G-P(sol) polarization free energy of solvation -24.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.685 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds