Wall clock time and date at job start Sun Mar 7 2021 00:07:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37783 * 119.85172 * 2 1 4 4 C 1.39701 * 119.90855 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19532 * 179.97438 * 4 3 2 6 6 O 1.21589 * 120.00071 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99870 * 0.02562 * 5 4 3 8 8 C 1.46497 * 120.00126 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 25.32833 * 8 7 5 10 10 C 1.53786 * 113.61643 * 156.52505 * 8 7 5 11 11 C 1.53782 * 87.07909 * 89.19525 * 10 8 7 12 12 H 1.08997 * 113.61784 * 270.88529 * 11 10 8 13 13 C 1.50707 * 113.61258 * 140.06349 * 11 10 8 14 14 C 1.38445 * 119.98603 * 119.72487 * 13 11 10 15 15 F 1.35106 * 120.01417 * 0.02680 * 14 13 11 16 16 C 1.38440 * 119.97650 * 179.76832 * 14 13 11 17 17 C 1.38400 * 119.94564 * 0.48831 * 16 14 13 18 18 F 1.35100 * 120.01290 * 179.78494 * 17 16 14 19 19 C 1.38492 * 119.97541 * 359.76834 * 17 16 14 20 20 C 1.38190 * 120.02661 * 359.97438 * 19 17 16 21 21 C 1.53781 * 113.61305 * 254.13352 * 8 7 5 22 22 C 1.40142 * 119.61646 * 0.24940 * 4 3 2 23 23 O 1.35653 * 120.14966 * 179.72635 * 22 4 3 24 24 C 1.38712 * 119.69906 * 359.49499 * 22 4 3 25 25 C 1.50694 * 119.96078 * 180.23042 * 24 22 4 26 26 O 1.42901 * 109.47433 * 75.27677 * 25 24 22 27 27 Si 1.86299 * 109.47424 * 195.28111 * 25 24 22 28 28 C 1.38050 * 120.08050 * 0.50932 * 24 22 4 29 29 H 1.08998 * 109.47327 * 90.00160 * 1 2 3 30 30 H 1.08997 * 109.47110 * 210.00338 * 1 2 3 31 31 H 1.09001 * 109.46880 * 330.00206 * 1 2 3 32 32 H 1.08001 * 120.04299 * 359.97438 * 3 2 1 33 33 H 0.97006 * 119.99816 * 359.97438 * 7 5 4 34 34 H 1.08993 * 113.61491 * 203.74894 * 10 8 7 35 35 H 1.09000 * 113.61395 * 334.56747 * 10 8 7 36 36 H 1.08001 * 120.02811 * 180.25252 * 16 14 13 37 37 H 1.08000 * 119.99030 * 180.02562 * 19 17 16 38 38 H 1.08001 * 119.97618 * 180.02562 * 20 19 17 39 39 H 1.09001 * 113.61695 * 25.34675 * 21 8 7 40 40 H 1.08997 * 113.61223 * 156.25258 * 21 8 7 41 41 H 0.96698 * 114.00287 * 90.00475 * 23 22 4 42 42 H 1.09006 * 109.47185 * 315.27791 * 25 24 22 43 43 H 0.96697 * 114.00385 * 180.02562 * 26 25 24 44 44 H 1.48501 * 109.99597 * 299.99674 * 27 25 24 45 45 H 1.48498 * 110.00171 * 61.31639 * 27 25 24 46 46 H 1.08002 * 119.80301 * 179.76694 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 0.0005 5 6 4.3306 2.4723 0.0000 6 8 5.5465 2.4694 0.0000 7 7 3.6596 3.6411 -0.0005 8 6 4.3951 4.9081 -0.0017 9 1 5.3926 4.8180 -0.4317 10 6 3.5864 6.0894 -0.5635 11 6 3.0823 6.3241 0.8703 12 1 2.1757 5.7689 1.1109 13 6 2.9944 7.7803 1.2485 14 6 1.7762 8.3285 1.6120 15 9 0.6664 7.5582 1.6284 16 6 1.6966 9.6650 1.9640 17 6 2.8334 10.4541 1.9422 18 9 2.7564 11.7596 2.2812 19 6 4.0500 9.9049 1.5730 20 6 4.1292 8.5693 1.2270 21 6 4.3717 5.6351 1.3532 22 6 4.2837 -0.0212 -0.0042 23 8 5.6401 -0.0325 -0.0094 24 6 3.5770 -1.2148 0.0012 25 6 4.3171 -2.5276 0.0014 26 8 4.8543 -2.7714 1.3029 27 14 3.1444 -3.9017 -0.4539 28 6 2.1966 -1.2017 0.0006 29 1 -0.3634 0.0000 -1.0276 30 1 -0.3633 -0.8899 0.5139 31 1 -0.3633 0.8900 0.5138 32 1 1.6511 2.1293 -0.0004 33 1 2.6895 3.6434 -0.0009 34 1 4.2063 6.8999 -0.9466 35 1 2.8028 5.7903 -1.2596 36 1 0.7474 10.0925 2.2516 37 1 4.9373 10.5203 1.5563 38 1 5.0784 8.1418 0.9397 39 1 4.2202 4.9698 2.2032 40 1 5.2066 6.3212 1.4950 41 1 6.0368 -0.0374 0.8725 42 1 5.1289 -2.4871 -0.7250 43 1 5.3452 -3.6012 1.3767 44 1 2.0331 -3.9674 0.5288 45 1 2.6033 -3.6765 -1.8183 46 1 1.6509 -2.1337 0.0010 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:40 Heat of formation + Delta-G solvation = -114.476041 kcal Electronic energy + Delta-G solvation = -33457.202292 eV Core-core repulsion = 28529.551103 eV Total energy + Delta-G solvation = -4927.651189 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.07065 -50.01166 -41.92790 -41.18514 -39.86683 -38.65524 -38.01632 -37.54754 -34.70683 -33.26903 -32.87664 -31.94337 -31.35625 -27.72371 -26.91773 -26.82568 -26.54735 -25.10649 -24.23240 -22.93989 -21.89541 -21.62874 -20.38972 -19.47070 -19.35157 -18.55542 -18.38940 -18.18792 -17.66886 -17.28710 -17.04834 -16.86156 -16.74707 -16.49003 -16.34217 -16.02450 -15.87629 -15.57993 -15.45458 -15.31316 -15.13657 -14.96694 -14.70533 -14.66910 -14.30444 -14.07338 -13.89613 -13.76475 -13.63803 -13.56833 -13.24370 -13.08040 -12.90262 -12.67658 -12.64597 -12.48601 -12.19329 -11.98858 -11.85538 -11.69174 -11.43529 -10.81053 -10.35058 -10.25431 -10.18750 -10.06394 -9.66224 -9.56839 -5.05453 -0.38558 -0.19258 -0.11817 0.00809 1.19344 1.55675 1.71983 1.86656 1.97791 2.19086 2.51258 2.76792 3.16669 3.17555 3.22007 3.34177 3.37670 3.45797 3.52457 3.53409 3.55221 3.72239 3.76566 3.79304 3.91793 3.97228 4.02437 4.07203 4.20272 4.38320 4.46261 4.49605 4.52666 4.53167 4.61029 4.66585 4.68529 4.71925 4.76622 4.82122 4.86112 4.87060 4.91221 4.95412 4.95935 5.13003 5.15414 5.25296 5.47561 5.52333 5.64187 6.39678 6.55144 6.74547 7.18480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.565 3.435 6 O -0.513 6.513 7 N -0.713 5.713 8 C 0.122 3.878 9 H 0.109 0.891 10 C -0.134 4.134 11 C -0.075 4.075 12 H 0.103 0.897 13 C -0.115 4.115 14 C 0.133 3.867 15 F -0.129 7.129 16 C -0.190 4.190 17 C 0.127 3.873 18 F -0.130 7.130 19 C -0.159 4.159 20 C -0.060 4.060 21 C -0.142 4.142 22 C 0.193 3.807 23 O -0.472 6.472 24 C -0.106 4.106 25 C -0.068 4.068 26 O -0.547 6.547 27 Si 0.687 3.313 28 C -0.081 4.081 29 H 0.076 0.924 30 H 0.070 0.930 31 H 0.073 0.927 32 H 0.133 0.867 33 H 0.399 0.601 34 H 0.102 0.898 35 H 0.079 0.921 36 H 0.149 0.851 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.078 0.922 40 H 0.098 0.902 41 H 0.400 0.600 42 H 0.081 0.919 43 H 0.384 0.616 44 H -0.249 1.249 45 H -0.253 1.253 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.248 -2.797 -0.272 3.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.167 4.167 5 C 0.352 3.648 6 O -0.389 6.389 7 N -0.365 5.365 8 C 0.017 3.983 9 H 0.127 0.873 10 C -0.172 4.172 11 C -0.094 4.094 12 H 0.121 0.879 13 C -0.116 4.116 14 C 0.113 3.887 15 F -0.107 7.107 16 C -0.209 4.209 17 C 0.108 3.892 18 F -0.108 7.108 19 C -0.178 4.178 20 C -0.078 4.078 21 C -0.181 4.181 22 C 0.146 3.854 23 O -0.283 6.283 24 C -0.107 4.107 25 C -0.178 4.178 26 O -0.354 6.354 27 Si 0.588 3.412 28 C -0.099 4.099 29 H 0.095 0.905 30 H 0.089 0.911 31 H 0.092 0.908 32 H 0.150 0.850 33 H 0.235 0.765 34 H 0.120 0.880 35 H 0.098 0.902 36 H 0.167 0.833 37 H 0.163 0.837 38 H 0.163 0.837 39 H 0.096 0.904 40 H 0.116 0.884 41 H 0.259 0.741 42 H 0.099 0.901 43 H 0.232 0.768 44 H -0.174 1.174 45 H -0.178 1.178 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.560 -2.412 -0.972 3.033 hybrid contribution -0.669 0.836 0.621 1.238 sum -2.229 -1.576 -0.351 2.752 Atomic orbital electron populations 1.20841 0.89945 1.03556 1.03019 1.19768 0.96834 0.92164 1.00924 1.21114 0.92165 0.98206 0.97087 1.20340 0.93879 0.93394 1.09115 1.17970 0.87282 0.83158 0.76393 1.90835 1.12908 1.87177 1.47959 1.45586 1.10017 1.04888 1.76029 1.21817 0.97293 0.82270 0.96916 0.87307 1.23443 1.00235 0.97952 0.95611 1.21588 0.99775 0.90836 0.97165 0.87920 1.19794 0.91935 0.96898 1.02933 1.17138 0.82737 0.88242 1.00532 1.91528 1.50762 1.74534 1.93917 1.21081 1.00085 0.93165 1.06611 1.17339 0.93944 0.78629 0.99295 1.91560 1.97009 1.32699 1.89567 1.21262 0.97174 0.96484 1.02841 1.20780 0.98281 0.92135 0.96577 1.23615 0.97012 0.99248 0.98187 1.18160 0.84050 0.89547 0.93648 1.84666 1.13966 1.95856 1.33821 1.19662 0.93237 0.93859 1.03952 1.24592 1.04067 1.00088 0.89089 1.86441 1.74587 1.45599 1.28729 0.95094 0.80250 0.85936 0.79956 1.21017 0.92988 0.98155 0.97713 0.90536 0.91130 0.90790 0.84967 0.76492 0.87996 0.90206 0.83304 0.83727 0.83657 0.90372 0.88377 0.74069 0.90133 0.76779 1.17443 1.17775 0.85307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.21 10.00 36.01 0.36 0.57 16 2 C -0.10 -0.04 5.87 -104.67 -0.61 -0.66 16 3 C -0.07 -0.01 9.18 -39.20 -0.36 -0.37 16 4 C -0.16 -0.39 5.89 -104.85 -0.62 -1.01 16 5 C 0.56 1.67 7.76 -12.47 -0.10 1.57 16 6 O -0.51 -3.23 14.78 -16.59 -0.25 -3.47 16 7 N -0.71 0.23 5.22 -54.06 -0.28 -0.05 16 8 C 0.12 -0.11 4.30 -67.12 -0.29 -0.40 16 9 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 10 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 11 C -0.08 0.14 3.78 -90.86 -0.34 -0.20 16 12 H 0.10 -0.19 7.45 -51.93 -0.39 -0.57 16 13 C -0.11 0.10 5.30 -104.55 -0.55 -0.45 16 14 C 0.13 0.06 7.24 -39.43 -0.29 -0.22 16 15 F -0.13 -0.17 16.36 2.25 0.04 -0.13 16 16 C -0.19 -0.08 10.01 -39.45 -0.39 -0.48 16 17 C 0.13 0.08 7.30 -39.43 -0.29 -0.21 16 18 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 19 C -0.16 0.17 10.02 -39.51 -0.40 -0.23 16 20 C -0.06 0.11 8.61 -39.60 -0.34 -0.23 16 21 C -0.14 0.24 7.27 -25.82 -0.19 0.05 16 22 C 0.19 0.66 6.69 -38.69 -0.26 0.40 16 23 O -0.47 -1.79 10.90 -40.54 -0.44 -2.23 16 24 C -0.11 -0.27 5.30 -104.52 -0.55 -0.82 16 25 C -0.07 -0.02 2.37 36.00 0.09 0.06 16 26 O -0.55 0.05 12.86 -35.23 -0.45 -0.41 16 27 Si 0.69 -0.83 30.19 -169.99 -5.13 -5.96 16 28 C -0.08 -0.14 8.30 -39.54 -0.33 -0.47 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 31 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 32 H 0.13 -0.39 6.40 -52.49 -0.34 -0.73 16 33 H 0.40 -1.04 6.74 -40.82 -0.27 -1.32 16 34 H 0.10 -0.33 7.72 -51.93 -0.40 -0.73 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 37 H 0.14 -0.39 8.06 -52.49 -0.42 -0.81 16 38 H 0.15 -0.58 6.67 -52.49 -0.35 -0.93 16 39 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.10 -0.26 6.33 -51.93 -0.33 -0.59 16 41 H 0.40 0.46 9.06 45.56 0.41 0.87 16 42 H 0.08 0.00 7.82 -51.93 -0.41 -0.41 16 43 H 0.38 -1.89 8.74 45.56 0.40 -1.49 16 44 H -0.25 -0.28 6.74 56.52 0.38 0.10 16 45 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 46 H 0.13 0.13 4.87 -52.49 -0.26 -0.13 16 LS Contribution 389.93 15.07 5.88 5.88 Total: 0.00 -9.24 389.93 -10.74 -19.98 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -4.49 Total: -10.44 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -5.65 Total: -2.95 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.28 Total: -0.05 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.14 Total: -6.11 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.34 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.13 Total: -5.96 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -9.24 -10.74 -19.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.497 kcal (2) G-P(sol) polarization free energy of solvation -9.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.743 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds