Wall clock time and date at job start Sun Mar 7 2021 00:07:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37783 * 119.85172 * 2 1 4 4 C 1.39701 * 119.90855 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19532 * 179.97438 * 4 3 2 6 6 O 1.21589 * 120.00071 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99870 * 0.02562 * 5 4 3 8 8 C 1.46497 * 120.00126 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 25.32833 * 8 7 5 10 10 C 1.53786 * 113.61643 * 156.52505 * 8 7 5 11 11 C 1.53782 * 87.07909 * 89.19525 * 10 8 7 12 12 H 1.08997 * 113.61784 * 270.88529 * 11 10 8 13 13 C 1.50707 * 113.61258 * 140.06349 * 11 10 8 14 14 C 1.38445 * 119.98603 * 119.72487 * 13 11 10 15 15 F 1.35106 * 120.01417 * 0.02680 * 14 13 11 16 16 C 1.38440 * 119.97650 * 179.76832 * 14 13 11 17 17 C 1.38400 * 119.94564 * 0.48831 * 16 14 13 18 18 F 1.35100 * 120.01290 * 179.78494 * 17 16 14 19 19 C 1.38492 * 119.97541 * 359.76834 * 17 16 14 20 20 C 1.38190 * 120.02661 * 359.97438 * 19 17 16 21 21 C 1.53781 * 113.61305 * 254.13352 * 8 7 5 22 22 C 1.40142 * 119.61646 * 0.24940 * 4 3 2 23 23 O 1.35653 * 120.14966 * 179.72635 * 22 4 3 24 24 C 1.38712 * 119.69906 * 359.49499 * 22 4 3 25 25 C 1.50694 * 119.96078 * 180.23042 * 24 22 4 26 26 O 1.42901 * 109.47433 * 75.27677 * 25 24 22 27 27 Si 1.86299 * 109.47424 * 195.28111 * 25 24 22 28 28 C 1.38050 * 120.08050 * 0.50932 * 24 22 4 29 29 H 1.08998 * 109.47327 * 90.00160 * 1 2 3 30 30 H 1.08997 * 109.47110 * 210.00338 * 1 2 3 31 31 H 1.09001 * 109.46880 * 330.00206 * 1 2 3 32 32 H 1.08001 * 120.04299 * 359.97438 * 3 2 1 33 33 H 0.97006 * 119.99816 * 359.97438 * 7 5 4 34 34 H 1.08993 * 113.61491 * 203.74894 * 10 8 7 35 35 H 1.09000 * 113.61395 * 334.56747 * 10 8 7 36 36 H 1.08001 * 120.02811 * 180.25252 * 16 14 13 37 37 H 1.08000 * 119.99030 * 180.02562 * 19 17 16 38 38 H 1.08001 * 119.97618 * 180.02562 * 20 19 17 39 39 H 1.09001 * 113.61695 * 25.34675 * 21 8 7 40 40 H 1.08997 * 113.61223 * 156.25258 * 21 8 7 41 41 H 0.96698 * 114.00287 * 90.00475 * 23 22 4 42 42 H 1.09006 * 109.47185 * 315.27791 * 25 24 22 43 43 H 0.96697 * 114.00385 * 180.02562 * 26 25 24 44 44 H 1.48501 * 109.99597 * 299.99674 * 27 25 24 45 45 H 1.48498 * 110.00171 * 61.31639 * 27 25 24 46 46 H 1.08002 * 119.80301 * 179.76694 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 0.0005 5 6 4.3306 2.4723 0.0000 6 8 5.5465 2.4694 0.0000 7 7 3.6596 3.6411 -0.0005 8 6 4.3951 4.9081 -0.0017 9 1 5.3926 4.8180 -0.4317 10 6 3.5864 6.0894 -0.5635 11 6 3.0823 6.3241 0.8703 12 1 2.1757 5.7689 1.1109 13 6 2.9944 7.7803 1.2485 14 6 1.7762 8.3285 1.6120 15 9 0.6664 7.5582 1.6284 16 6 1.6966 9.6650 1.9640 17 6 2.8334 10.4541 1.9422 18 9 2.7564 11.7596 2.2812 19 6 4.0500 9.9049 1.5730 20 6 4.1292 8.5693 1.2270 21 6 4.3717 5.6351 1.3532 22 6 4.2837 -0.0212 -0.0042 23 8 5.6401 -0.0325 -0.0094 24 6 3.5770 -1.2148 0.0012 25 6 4.3171 -2.5276 0.0014 26 8 4.8543 -2.7714 1.3029 27 14 3.1444 -3.9017 -0.4539 28 6 2.1966 -1.2017 0.0006 29 1 -0.3634 0.0000 -1.0276 30 1 -0.3633 -0.8899 0.5139 31 1 -0.3633 0.8900 0.5138 32 1 1.6511 2.1293 -0.0004 33 1 2.6895 3.6434 -0.0009 34 1 4.2063 6.8999 -0.9466 35 1 2.8028 5.7903 -1.2596 36 1 0.7474 10.0925 2.2516 37 1 4.9373 10.5203 1.5563 38 1 5.0784 8.1418 0.9397 39 1 4.2202 4.9698 2.2032 40 1 5.2066 6.3212 1.4950 41 1 6.0368 -0.0374 0.8725 42 1 5.1289 -2.4871 -0.7250 43 1 5.3452 -3.6012 1.3767 44 1 2.0331 -3.9674 0.5288 45 1 2.6033 -3.6765 -1.8183 46 1 1.6509 -2.1337 0.0010 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:39 Heat of formation + Delta-G solvation = -112.496370 kcal Electronic energy + Delta-G solvation = -33457.116447 eV Core-core repulsion = 28529.551103 eV Total energy + Delta-G solvation = -4927.565344 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -50.09224 -50.06064 -41.99504 -41.16150 -39.92958 -38.67405 -38.12106 -37.56720 -34.81682 -33.28964 -32.90984 -31.87508 -31.31949 -27.68389 -26.85581 -26.76570 -26.53376 -25.14126 -24.18986 -22.90065 -21.93615 -21.72017 -20.35615 -19.57534 -19.35216 -18.58635 -18.38803 -18.19781 -17.71818 -17.24102 -17.06998 -16.88823 -16.83412 -16.49567 -16.39070 -16.07173 -15.99646 -15.58147 -15.48390 -15.24294 -15.14051 -15.03903 -14.69744 -14.61018 -14.32389 -14.01310 -13.83118 -13.73067 -13.58173 -13.47230 -13.16128 -13.08628 -12.87049 -12.68674 -12.57870 -12.52364 -12.09807 -12.04823 -11.81221 -11.76926 -11.34361 -11.00204 -10.38400 -10.32031 -10.14656 -10.07819 -9.64778 -9.61622 -4.98417 -0.50337 -0.14688 -0.06843 -0.05209 1.23426 1.55844 1.63062 1.88124 1.94376 2.26030 2.40963 2.80292 3.07382 3.24016 3.26973 3.40797 3.41959 3.47090 3.55038 3.62303 3.64964 3.79380 3.84156 3.91204 3.96176 4.02733 4.06149 4.15382 4.21126 4.42295 4.48164 4.56812 4.65117 4.68438 4.71100 4.71301 4.79066 4.82015 4.83294 4.87783 4.89231 4.97356 5.02728 5.05902 5.06077 5.09281 5.23336 5.24359 5.49684 5.53691 5.70660 6.36883 6.61859 6.83753 7.07074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.061 4.061 4 C -0.176 4.176 5 C 0.562 3.438 6 O -0.556 6.556 7 N -0.698 5.698 8 C 0.115 3.885 9 H 0.093 0.907 10 C -0.122 4.122 11 C -0.071 4.071 12 H 0.103 0.897 13 C -0.112 4.112 14 C 0.116 3.884 15 F -0.137 7.137 16 C -0.198 4.198 17 C 0.108 3.892 18 F -0.142 7.142 19 C -0.155 4.155 20 C -0.056 4.056 21 C -0.137 4.137 22 C 0.168 3.832 23 O -0.486 6.486 24 C -0.124 4.124 25 C -0.080 4.080 26 O -0.562 6.562 27 Si 0.781 3.219 28 C -0.096 4.096 29 H 0.085 0.915 30 H 0.071 0.929 31 H 0.090 0.910 32 H 0.164 0.836 33 H 0.412 0.588 34 H 0.114 0.886 35 H 0.086 0.914 36 H 0.151 0.849 37 H 0.162 0.838 38 H 0.171 0.829 39 H 0.067 0.933 40 H 0.111 0.889 41 H 0.405 0.595 42 H 0.079 0.921 43 H 0.404 0.596 44 H -0.279 1.279 45 H -0.289 1.289 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.790 -2.649 -0.496 3.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.079 4.079 4 C -0.180 4.180 5 C 0.350 3.650 6 O -0.434 6.434 7 N -0.350 5.350 8 C 0.010 3.990 9 H 0.111 0.889 10 C -0.160 4.160 11 C -0.089 4.089 12 H 0.121 0.879 13 C -0.113 4.113 14 C 0.097 3.903 15 F -0.116 7.116 16 C -0.218 4.218 17 C 0.088 3.912 18 F -0.121 7.121 19 C -0.173 4.173 20 C -0.073 4.073 21 C -0.176 4.176 22 C 0.121 3.879 23 O -0.298 6.298 24 C -0.125 4.125 25 C -0.189 4.189 26 O -0.372 6.372 27 Si 0.685 3.315 28 C -0.114 4.114 29 H 0.104 0.896 30 H 0.090 0.910 31 H 0.109 0.891 32 H 0.182 0.818 33 H 0.250 0.750 34 H 0.132 0.868 35 H 0.104 0.896 36 H 0.169 0.831 37 H 0.180 0.820 38 H 0.188 0.812 39 H 0.086 0.914 40 H 0.129 0.871 41 H 0.265 0.735 42 H 0.097 0.903 43 H 0.255 0.745 44 H -0.206 1.206 45 H -0.216 1.216 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.106 -2.252 -1.182 3.302 hybrid contribution -0.520 0.815 0.705 1.197 sum -2.626 -1.437 -0.477 3.031 Atomic orbital electron populations 1.20921 0.88057 1.04511 1.03870 1.20108 0.98201 0.91763 0.99677 1.21422 0.91255 0.99529 0.95726 1.20469 0.94913 0.92904 1.09713 1.18130 0.86875 0.84045 0.75941 1.90806 1.14607 1.87766 1.50262 1.45494 1.10642 1.04349 1.74538 1.21899 0.96944 0.82359 0.97844 0.88871 1.23420 1.00082 0.97198 0.95295 1.21561 0.99630 0.90186 0.97534 0.87893 1.19952 0.91693 0.97392 1.02228 1.17299 0.83069 0.88303 1.01618 1.91502 1.51261 1.74671 1.94118 1.21168 1.00382 0.93412 1.06811 1.17567 0.94773 0.78301 1.00537 1.91526 1.97116 1.33541 1.89891 1.21518 0.97088 0.97014 1.01710 1.21069 0.98944 0.91673 0.95638 1.23616 0.97650 0.99120 0.97185 1.18441 0.83941 0.90461 0.95081 1.84635 1.14667 1.95996 1.34513 1.19981 0.93866 0.94582 1.04066 1.24831 1.04655 1.00137 0.89294 1.86395 1.75033 1.47287 1.28454 0.94053 0.77539 0.83807 0.76055 1.21231 0.92896 0.99055 0.98207 0.89615 0.90995 0.89081 0.81824 0.75026 0.86756 0.89561 0.83126 0.82025 0.81152 0.91448 0.87071 0.73549 0.90269 0.74502 1.20640 1.21633 0.85001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.58 10.00 71.24 0.71 1.29 16 2 C -0.10 -0.06 5.87 -19.90 -0.12 -0.17 16 3 C -0.06 0.01 9.18 22.52 0.21 0.22 16 4 C -0.18 -1.01 5.89 -20.01 -0.12 -1.12 16 5 C 0.56 3.86 7.76 86.70 0.67 4.53 16 6 O -0.56 -8.04 14.78 16.92 0.25 -7.79 16 7 N -0.70 0.57 5.22 -443.20 -2.31 -1.74 16 8 C 0.11 -0.26 4.30 45.52 0.20 -0.06 16 9 H 0.09 0.15 7.50 -2.39 -0.02 0.13 16 10 C -0.12 0.79 7.29 31.12 0.23 1.02 16 11 C -0.07 0.35 3.78 -10.95 -0.04 0.31 16 12 H 0.10 -0.49 7.45 -2.39 -0.02 -0.51 16 13 C -0.11 0.31 5.30 -19.82 -0.10 0.20 16 14 C 0.12 0.10 7.24 22.37 0.16 0.26 16 15 F -0.14 -0.36 16.36 44.97 0.74 0.37 16 16 C -0.20 -0.27 10.01 22.36 0.22 -0.04 16 17 C 0.11 0.14 7.30 22.37 0.16 0.31 16 18 F -0.14 -0.63 17.27 44.97 0.78 0.14 16 19 C -0.15 0.47 10.02 22.32 0.22 0.70 16 20 C -0.06 0.29 8.61 22.26 0.19 0.48 16 21 C -0.14 0.56 7.27 31.18 0.23 0.79 16 22 C 0.17 1.44 6.69 22.85 0.15 1.59 16 23 O -0.49 -4.85 10.90 -68.77 -0.75 -5.60 16 24 C -0.12 -0.79 5.30 -19.80 -0.10 -0.89 16 25 C -0.08 -0.14 2.37 71.23 0.17 0.03 16 26 O -0.56 -0.32 12.86 -148.98 -1.92 -2.23 16 27 Si 0.78 -1.58 30.19 68.60 2.07 0.49 16 28 C -0.10 -0.39 8.30 22.30 0.19 -0.21 16 29 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 30 H 0.07 -0.35 8.08 -2.39 -0.02 -0.37 16 31 H 0.09 -0.74 8.08 -2.39 -0.02 -0.76 16 32 H 0.16 -1.26 6.40 -2.91 -0.02 -1.28 16 33 H 0.41 -2.59 6.74 -92.70 -0.62 -3.22 16 34 H 0.11 -0.97 7.72 -2.39 -0.02 -0.99 16 35 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 36 H 0.15 -0.02 8.06 -2.91 -0.02 -0.04 16 37 H 0.16 -1.11 8.06 -2.91 -0.02 -1.14 16 38 H 0.17 -1.80 6.67 -2.91 -0.02 -1.82 16 39 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.11 -0.75 6.33 -2.39 -0.02 -0.77 16 41 H 0.40 2.07 9.06 -74.06 -0.67 1.39 16 42 H 0.08 0.10 7.82 -2.38 -0.02 0.09 16 43 H 0.40 -3.91 8.74 -74.06 -0.65 -4.55 16 44 H -0.28 -0.76 6.74 99.48 0.67 -0.09 16 45 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 46 H 0.13 0.35 4.87 -2.91 -0.01 0.34 16 Total: 0.00 -23.63 389.93 1.23 -22.39 By element: Atomic # 1 Polarization: -14.43 SS G_CDS: -0.85 Total: -15.28 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: 3.23 Total: 9.23 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -2.31 Total: -1.74 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -2.41 Total: -15.62 kcal Atomic # 9 Polarization: -1.00 SS G_CDS: 1.51 Total: 0.52 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: 2.07 Total: 0.49 kcal Total: -23.63 1.23 -22.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.103 kcal (2) G-P(sol) polarization free energy of solvation -23.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.393 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds