Wall clock time and date at job start Sun Mar 7 2021 00:07:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46901 * 111.00108 * 2 1 4 4 C 1.39054 * 110.99836 * 123.95298 * 2 1 3 5 5 C 1.39199 * 119.93091 * 120.02217 * 4 2 1 6 6 C 1.50703 * 119.96237 * 0.02562 * 5 4 2 7 7 O 1.42904 * 109.47207 * 75.00300 * 6 5 4 8 8 Si 1.86300 * 109.46730 * 194.99830 * 6 5 4 9 9 C 1.37632 * 120.06981 * 179.76432 * 5 4 2 10 10 C 1.39774 * 119.92581 * 0.48541 * 9 5 4 11 11 C 1.47524 * 120.06243 * 179.76727 * 10 9 5 12 12 O 1.21591 * 120.00638 * 359.72703 * 11 10 9 13 13 N 1.34781 * 119.99598 * 179.72916 * 11 10 9 14 14 C 1.46504 * 119.99665 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.85136 * 336.19533 * 14 13 11 16 16 C 1.53779 * 113.61484 * 107.49929 * 14 13 11 17 17 C 1.53785 * 87.08093 * 89.11287 * 16 14 13 18 18 H 1.09002 * 113.61570 * 270.88522 * 17 16 14 19 19 C 1.50701 * 113.69000 * 139.98979 * 17 16 14 20 20 C 1.38460 * 119.98537 * 140.65869 * 19 17 16 21 21 F 1.35095 * 120.00810 * 0.02967 * 20 19 17 22 22 C 1.38441 * 119.97289 * 179.76781 * 20 19 17 23 23 C 1.38398 * 119.94756 * 0.48683 * 22 20 19 24 24 F 1.35097 * 120.01327 * 179.78756 * 23 22 20 25 25 C 1.38495 * 119.97581 * 359.77361 * 23 22 20 26 26 C 1.38183 * 120.02784 * 359.97438 * 25 23 22 27 27 C 1.53781 * 87.08241 * 25.43228 * 17 16 14 28 28 C 1.39810 * 119.86506 * 359.49333 * 10 9 5 29 29 C 1.37585 * 119.93058 * 0.25175 * 28 10 9 30 30 H 1.08996 * 109.46738 * 296.04415 * 1 2 3 31 31 H 1.08996 * 109.46966 * 56.04710 * 1 2 3 32 32 H 1.08999 * 109.46893 * 176.05061 * 1 2 3 33 33 H 1.08999 * 109.47292 * 183.94903 * 3 2 1 34 34 H 1.08994 * 109.46926 * 303.95482 * 3 2 1 35 35 H 1.08999 * 109.47076 * 63.95588 * 3 2 1 36 36 H 1.08994 * 109.47059 * 314.99739 * 6 5 4 37 37 H 0.96696 * 113.99727 * 180.02562 * 7 6 5 38 38 H 1.48501 * 110.00257 * 299.99861 * 8 6 5 39 39 H 1.48497 * 110.00265 * 61.32194 * 8 6 5 40 40 H 1.07999 * 120.03436 * 180.23053 * 9 5 4 41 41 H 0.96996 * 120.00382 * 359.97438 * 13 11 10 42 42 H 1.09003 * 113.61775 * 334.57164 * 16 14 13 43 43 H 1.08996 * 113.61960 * 203.65890 * 16 14 13 44 44 H 1.07991 * 120.02736 * 180.25786 * 22 20 19 45 45 H 1.08001 * 119.98764 * 180.02562 * 25 23 22 46 46 H 1.07997 * 119.97482 * 180.02562 * 26 25 23 47 47 H 1.09005 * 113.61302 * 89.11252 * 27 17 16 48 48 H 1.08993 * 113.62030 * 220.02098 * 27 17 16 49 49 H 1.07998 * 120.03051 * 180.26813 * 28 10 9 50 50 H 1.08002 * 119.96667 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9673 -0.7251 1.0768 5 6 2.7797 -1.8328 0.8519 6 6 3.1182 -2.2441 -0.5578 7 8 4.0876 -1.3431 -1.0971 8 14 3.8135 -3.9725 -0.5503 9 6 3.2784 -2.5496 1.9158 10 6 2.9600 -2.1702 3.2228 11 6 3.4887 -2.9395 4.3652 12 8 4.1981 -3.9075 4.1702 13 7 3.1853 -2.5692 5.6251 14 6 3.7108 -3.3328 6.7596 15 1 3.9641 -4.3600 6.4975 16 6 4.8200 -2.6012 7.5337 17 6 3.7046 -1.9864 8.3955 18 1 3.3119 -1.0502 7.9987 19 6 4.0478 -1.9028 9.8606 20 6 3.6748 -0.7907 10.5963 21 9 3.0030 0.2189 10.0011 22 6 3.9860 -0.7163 11.9432 23 6 4.6785 -1.7494 12.5504 24 9 4.9866 -1.6762 13.8637 25 6 5.0552 -2.8583 11.8112 26 6 4.7395 -2.9339 10.4681 27 6 2.8541 -3.2147 8.0313 28 6 2.1442 -1.0568 3.4454 29 6 1.6530 -0.3412 2.3778 30 1 -0.3633 0.4512 0.9233 31 1 -0.3633 0.5739 -0.8524 32 1 -0.3633 -1.0252 -0.0708 33 1 3.0828 1.3432 -0.0708 34 1 1.5898 1.9163 -0.8524 35 1 1.7045 1.8723 0.9233 36 1 2.2171 -2.2176 -1.1703 37 1 4.3527 -1.5476 -2.0042 38 1 5.0426 -4.0220 0.2815 39 1 2.8035 -4.9239 -0.0213 40 1 3.9116 -3.4068 1.7407 41 1 2.6197 -1.7967 5.7807 42 1 5.3616 -1.8697 6.9339 43 1 5.4806 -3.2693 8.0862 44 1 3.6920 0.1488 12.5188 45 1 5.5952 -3.6648 12.2850 46 1 5.0333 -3.7992 9.8926 47 1 2.9772 -4.0508 8.7198 48 1 1.8086 -2.9788 7.8330 49 1 1.9000 -0.7587 4.4543 50 1 1.0224 0.5187 2.5491 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:45 Heat of formation + Delta-G solvation = -52.285890 kcal Electronic energy + Delta-G solvation = -35322.442858 eV Core-core repulsion = 30339.669479 eV Total energy + Delta-G solvation = -4982.773379 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.159 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -50.08614 -50.02226 -41.92194 -41.25723 -40.13564 -38.80852 -37.69959 -37.20822 -34.79476 -32.94800 -32.01320 -31.72378 -31.04848 -28.63447 -26.93528 -26.89429 -26.84008 -25.73644 -24.38314 -23.48442 -22.95664 -22.76186 -21.26950 -20.43791 -19.39821 -18.86103 -18.27666 -18.27102 -17.95746 -17.47309 -17.24236 -17.05823 -16.85729 -16.50517 -16.35477 -16.20878 -16.11475 -15.93703 -15.74719 -15.54584 -15.38789 -15.32685 -14.96449 -14.74172 -14.55592 -14.16580 -14.07427 -13.94540 -13.74736 -13.69884 -13.60716 -13.56385 -13.33427 -13.10395 -12.89799 -12.76290 -12.70438 -12.67177 -12.21695 -12.04420 -11.87678 -11.84083 -11.47539 -11.05274 -10.26398 -10.19378 -10.17758 -10.11891 -9.81067 -9.67195 -9.60561 -4.92230 -0.39921 -0.20549 -0.12979 0.09807 1.37002 1.63961 1.74522 1.91944 2.07681 2.17787 2.59166 2.72106 2.75635 3.15456 3.32741 3.35015 3.37236 3.47003 3.52084 3.56159 3.67317 3.70801 3.77612 3.78220 3.90616 4.01565 4.04553 4.05416 4.19390 4.25757 4.38498 4.42728 4.44061 4.49292 4.50644 4.57986 4.58724 4.63725 4.68629 4.74553 4.76181 4.80704 4.82033 4.84255 4.92426 4.94034 4.94371 4.99209 5.07725 5.12904 5.21686 5.42334 5.50780 5.62986 5.76016 6.21558 6.33514 6.75793 7.08950 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.507 5.507 3 C 0.031 3.969 4 C 0.146 3.854 5 C -0.061 4.061 6 C -0.050 4.050 7 O -0.539 6.539 8 Si 0.667 3.333 9 C -0.056 4.056 10 C -0.138 4.138 11 C 0.565 3.435 12 O -0.531 6.531 13 N -0.709 5.709 14 C 0.120 3.880 15 H 0.110 0.890 16 C -0.142 4.142 17 C -0.076 4.076 18 H 0.103 0.897 19 C -0.115 4.115 20 C 0.133 3.867 21 F -0.129 7.129 22 C -0.190 4.190 23 C 0.128 3.872 24 F -0.130 7.130 25 C -0.159 4.159 26 C -0.060 4.060 27 C -0.134 4.134 28 C -0.069 4.069 29 C -0.157 4.157 30 H 0.032 0.968 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.077 0.923 34 H 0.076 0.924 35 H 0.030 0.970 36 H 0.080 0.920 37 H 0.380 0.620 38 H -0.246 1.246 39 H -0.254 1.254 40 H 0.139 0.861 41 H 0.401 0.599 42 H 0.078 0.922 43 H 0.099 0.901 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.146 0.854 47 H 0.102 0.898 48 H 0.080 0.920 49 H 0.129 0.871 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.771 0.999 -2.589 3.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.228 5.228 3 C -0.115 4.115 4 C 0.051 3.949 5 C -0.062 4.062 6 C -0.161 4.161 7 O -0.345 6.345 8 Si 0.568 3.432 9 C -0.075 4.075 10 C -0.141 4.141 11 C 0.352 3.648 12 O -0.407 6.407 13 N -0.361 5.361 14 C 0.015 3.985 15 H 0.128 0.872 16 C -0.181 4.181 17 C -0.094 4.094 18 H 0.121 0.879 19 C -0.116 4.116 20 C 0.114 3.886 21 F -0.107 7.107 22 C -0.209 4.209 23 C 0.108 3.892 24 F -0.108 7.108 25 C -0.178 4.178 26 C -0.078 4.078 27 C -0.172 4.172 28 C -0.088 4.088 29 C -0.177 4.177 30 H 0.051 0.949 31 H 0.097 0.903 32 H 0.090 0.910 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.048 0.952 36 H 0.098 0.902 37 H 0.227 0.773 38 H -0.171 1.171 39 H -0.179 1.179 40 H 0.156 0.844 41 H 0.237 0.763 42 H 0.097 0.903 43 H 0.117 0.883 44 H 0.167 0.833 45 H 0.163 0.837 46 H 0.163 0.837 47 H 0.121 0.879 48 H 0.098 0.902 49 H 0.147 0.853 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.984 -0.302 -2.069 2.883 hybrid contribution -1.035 1.636 1.469 2.430 sum -3.019 1.335 -0.600 3.355 Atomic orbital electron populations 1.22531 0.85476 1.02945 1.01362 1.59391 1.08352 1.14789 1.40245 1.22455 1.01744 0.86396 1.00885 1.18798 0.94272 0.92949 0.88890 1.19254 0.97910 0.95140 0.93905 1.24402 0.95881 1.03293 0.92516 1.86471 1.59936 1.54504 1.33571 0.95591 0.81844 0.76036 0.89703 1.21086 0.96729 0.98646 0.90998 1.19783 1.02602 0.98315 0.93372 1.18140 0.80022 0.83866 0.82726 1.90814 1.37207 1.27470 1.85253 1.45563 1.52851 1.32746 1.04958 1.21858 0.94703 0.97043 0.84929 0.87194 1.23588 0.96465 1.00313 0.97708 1.21562 0.98341 0.99544 0.89944 0.87894 1.19792 1.01437 0.93955 0.96400 1.17139 0.95333 0.85851 0.90312 1.91524 1.77460 1.58170 1.83583 1.21080 1.04013 1.01354 0.94488 1.17338 0.98133 0.95146 0.78559 1.91560 1.90852 1.96399 1.32006 1.21260 1.03375 0.98337 0.94782 1.20770 0.95424 0.98017 0.93557 1.23455 0.99315 0.98000 0.96449 1.21145 0.95044 0.93387 0.99223 1.21643 1.02091 1.01186 0.92816 0.94901 0.90290 0.91022 0.90417 0.90502 0.95190 0.90168 0.77263 1.17129 1.17862 0.84365 0.76298 0.90319 0.88312 0.83290 0.83717 0.83680 0.87947 0.90176 0.85292 0.85034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.34 60.07 0.56 0.54 16 2 N -0.51 -0.31 4.20 -186.87 -0.78 -1.10 16 3 C 0.03 -0.01 9.38 60.07 0.56 0.55 16 4 C 0.15 0.25 4.70 -83.86 -0.39 -0.15 16 5 C -0.06 -0.17 5.30 -104.49 -0.55 -0.73 16 6 C -0.05 -0.05 2.32 36.01 0.08 0.04 16 7 O -0.54 -0.45 12.86 -35.23 -0.45 -0.90 16 8 Si 0.67 0.33 30.20 -169.99 -5.13 -4.80 16 9 C -0.06 -0.22 8.19 -39.23 -0.32 -0.54 16 10 C -0.14 -0.35 5.88 -104.95 -0.62 -0.97 16 11 C 0.56 1.85 7.76 -12.47 -0.10 1.76 16 12 O -0.53 -3.75 15.93 5.29 0.08 -3.66 16 13 N -0.71 0.14 5.21 -54.06 -0.28 -0.14 16 14 C 0.12 -0.10 4.32 -67.11 -0.29 -0.39 16 15 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 16 C -0.14 0.21 7.26 -25.92 -0.19 0.02 16 17 C -0.08 0.14 3.78 -90.96 -0.34 -0.20 16 18 H 0.10 -0.18 7.42 -51.93 -0.39 -0.57 16 19 C -0.11 0.09 5.30 -104.54 -0.55 -0.46 16 20 C 0.13 0.07 7.25 -39.42 -0.29 -0.22 16 21 F -0.13 -0.17 16.35 2.25 0.04 -0.14 16 22 C -0.19 -0.09 10.01 -39.45 -0.39 -0.48 16 23 C 0.13 0.08 7.30 -39.43 -0.29 -0.21 16 24 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 25 C -0.16 0.16 10.02 -39.51 -0.40 -0.24 16 26 C -0.06 0.11 8.54 -39.60 -0.34 -0.23 16 27 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 28 C -0.07 0.00 9.53 -39.23 -0.37 -0.37 16 29 C -0.16 -0.04 8.53 -39.45 -0.34 -0.38 16 30 H 0.03 -0.05 7.10 -51.93 -0.37 -0.42 16 31 H 0.08 -0.16 8.12 -51.93 -0.42 -0.58 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 34 H 0.08 -0.10 8.12 -51.93 -0.42 -0.53 16 35 H 0.03 -0.03 7.32 -51.93 -0.38 -0.41 16 36 H 0.08 0.00 7.77 -51.93 -0.40 -0.40 16 37 H 0.38 -1.49 8.74 45.56 0.40 -1.09 16 38 H -0.25 -0.99 6.74 56.52 0.38 -0.61 16 39 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 40 H 0.14 0.71 4.47 -52.49 -0.23 0.48 16 41 H 0.40 -1.07 6.72 -40.82 -0.27 -1.34 16 42 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.10 -0.25 6.40 -51.93 -0.33 -0.58 16 44 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 45 H 0.15 -0.38 8.06 -52.49 -0.42 -0.81 16 46 H 0.15 -0.57 6.72 -52.49 -0.35 -0.93 16 47 H 0.10 -0.34 7.64 -51.93 -0.40 -0.73 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.13 -0.40 6.39 -52.49 -0.34 -0.74 16 50 H 0.13 -0.20 6.99 -52.49 -0.37 -0.56 16 LS Contribution 413.92 15.07 6.24 6.24 Total: 0.00 -8.78 413.92 -11.43 -20.21 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -6.42 Total: -13.00 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -4.75 Total: -2.50 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -1.07 Total: -1.24 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -0.37 Total: -4.56 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.35 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: -5.13 Total: -4.80 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -8.78 -11.43 -20.21 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.074 kcal (2) G-P(sol) polarization free energy of solvation -8.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds